RNA–Protein interactions for RNA: ENST00000593044.5

TMC6-224, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 3,070 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-224ENST00000593044 USP17L12C9JPN9 530 aa18.73■□□□□ 0.59
TMC6-224ENST00000593044 USP17L21D6R901 530 aa18.73■□□□□ 0.59
TMC6-224ENST00000593044 CCDC82Q8N4S0 544 aa18.73■□□□□ 0.59
TMC6-224ENST00000593044 ZNF75DP51815 510 aa18.73■□□□□ 0.59
TMC6-224ENST00000593044 CRY2Q49AN0 593 aa18.73■□□□□ 0.59
TMC6-224ENST00000593044 ERCC4Q92889 916 aaPredicted RBP18.73■□□□□ 0.59
TMC6-224ENST00000593044 RNF41Q9H4P4 317 aaPredicted RBP18.73■□□□□ 0.59
TMC6-224ENST00000593044 CFAP45Q9UL16 551 aa18.73■□□□□ 0.59
TMC6-224ENST00000593044 IRS2Q9Y4H2 1338 aa18.73■□□□□ 0.59
TMC6-224ENST00000593044 ERICH2A1L162 156 aa18.72■□□□□ 0.59
TMC6-224ENST00000593044 WTAPQ15007 396 aa18.72■□□□□ 0.59
TMC6-224ENST00000593044 SART3Q15020 963 aaKnown RBP18.72■□□□□ 0.59
TMC6-224ENST00000593044 FBXW7Q969H0 707 aa18.72■□□□□ 0.59
TMC6-224ENST00000593044 UBE2Q2LH0YL09 131 aa18.72■□□□□ 0.59
TMC6-224ENST00000593044 RANBP6O60518 1105 aaKnown RBP18.72■□□□□ 0.59
TMC6-224ENST00000593044 CBX1P83916 185 aa18.72■□□□□ 0.59
TMC6-224ENST00000593044 GRIK5Q16478 980 aa18.72■□□□□ 0.59
TMC6-224ENST00000593044 CCDC144BQ3MJ40 725 aa18.72■□□□□ 0.59
TMC6-224ENST00000593044 SYNE3Q6ZMZ3 975 aa18.72■□□□□ 0.59
TMC6-224ENST00000593044 USP28Q96RU2 1077 aa18.72■□□□□ 0.59
TMC6-224ENST00000593044 LIFRP42702 1097 aa18.72■□□□□ 0.59
TMC6-224ENST00000593044 PPP4R3BQ5MIZ7 849 aa18.72■□□□□ 0.59
TMC6-224ENST00000593044 ZNF772Q68DY9 489 aaPredicted RBP18.72■□□□□ 0.59
TMC6-224ENST00000593044 RBM43Q6ZSC3 357 aaKnown RBP18.72■□□□□ 0.59
TMC6-224ENST00000593044 ILDR1Q86SU0 546 aaPredicted RBP18.72■□□□□ 0.59
TMC6-224ENST00000593044 SGMS1Q86VZ5 419 aa18.72■□□□□ 0.59
TMC6-224ENST00000593044 COL23A1Q86Y22 540 aaPredicted RBP18.72■□□□□ 0.59
TMC6-224ENST00000593044 UBAC1Q9BSL1 405 aa18.72■□□□□ 0.59
TMC6-224ENST00000593044 TPM3P06753 285 aa18.71■□□□□ 0.59
TMC6-224ENST00000593044 DIXDC1Q155Q3 683 aa18.71■□□□□ 0.59
TMC6-224ENST00000593044 CTR9Q6PD62 1173 aa18.71■□□□□ 0.59
TMC6-224ENST00000593044 C11orf57Q6ZUT1 292 aaPredicted RBP18.71■□□□□ 0.59
TMC6-224ENST00000593044 CMTR1Q8N1G2 835 aaKnown RBP18.71■□□□□ 0.59
TMC6-224ENST00000593044 FBXO18Q8NFZ0 1043 aa18.71■□□□□ 0.59
TMC6-224ENST00000593044 NUP133Q8WUM0 1156 aa18.71■□□□□ 0.59
TMC6-224ENST00000593044 LDHBP07195 334 aaKnown RBP18.71■□□□□ 0.59
TMC6-224ENST00000593044 ARID5BQ14865 1188 aa18.71■□□□□ 0.59
TMC6-224ENST00000593044 CPLX2Q6PUV4 134 aaKnown RBP18.71■□□□□ 0.59
TMC6-224ENST00000593044 ZNF804AQ7Z570 1209 aa18.71■□□□□ 0.59
TMC6-224ENST00000593044 PLA2G4DQ86XP0 818 aa18.71■□□□□ 0.59
TMC6-224ENST00000593044 KLHL34Q8N239 644 aa18.71■□□□□ 0.59
TMC6-224ENST00000593044 ALG1Q9BT22 464 aa18.7■□□□□ 0.58
TMC6-224ENST00000593044 CRNKL1Q9BZJ0 848 aaKnown RBP18.7■□□□□ 0.58
TMC6-224ENST00000593044 FAM217BQ9NTX9 383 aaPredicted RBP18.7■□□□□ 0.58
TMC6-224ENST00000593044 TDRD7Q8NHU6 1098 aaKnown RBP18.7■□□□□ 0.58
TMC6-224ENST00000593044 ESR2Q92731 530 aa18.7■□□□□ 0.58
TMC6-224ENST00000593044 BRIP1Q9BX63 1249 aa18.7■□□□□ 0.58
TMC6-224ENST00000593044 GOLPH3LQ9H4A5 285 aa18.7■□□□□ 0.58
TMC6-224ENST00000593044 CLIP2Q9UDT6 1046 aa18.7■□□□□ 0.58
TMC6-224ENST00000593044 GGA1Q9UJY5 639 aa18.7■□□□□ 0.58
TMC6-224ENST00000593044 MYH2Q9UKX2 1941 aa18.7■□□□□ 0.58
TMC6-224ENST00000593044 C6orf229H3BNL8 230 aa18.7■□□□□ 0.58
TMC6-224ENST00000593044 IARSP41252 1262 aaKnown RBP18.7■□□□□ 0.58
TMC6-224ENST00000593044 CACTINQ8WUQ7 758 aaKnown RBP18.7■□□□□ 0.58
TMC6-224ENST00000593044 DCP1AQ9NPI6 582 aaPredicted RBP18.7■□□□□ 0.58
TMC6-224ENST00000593044 SPDYE4A6NLX3 237 aa18.69■□□□□ 0.58
TMC6-224ENST00000593044 CYP2D6P10635 497 aa18.69■□□□□ 0.58
TMC6-224ENST00000593044 SPTY2D1Q68D10 685 aaPredicted RBP18.69■□□□□ 0.58
TMC6-224ENST00000593044 SLC26A6Q9BXS9 759 aa18.69■□□□□ 0.58
TMC6-224ENST00000593044 PDS5AQ29RF7 1337 aaKnown RBP18.69■□□□□ 0.58
TMC6-224ENST00000593044 CDKL5O76039 1030 aa18.69■□□□□ 0.58
TMC6-224ENST00000593044 MSL1Q68DK7 614 aa18.69■□□□□ 0.58
TMC6-224ENST00000593044 WDR66Q8TBY9 1149 aa18.69■□□□□ 0.58
TMC6-224ENST00000593044 TNKSO95271 1327 aa18.68■□□□□ 0.58
TMC6-224ENST00000593044 NTRK3Q16288 839 aa18.68■□□□□ 0.58
TMC6-224ENST00000593044 POLLQ9UGP5 575 aa18.68■□□□□ 0.58
TMC6-224ENST00000593044 ANAPC4Q9UJX5 808 aa18.68■□□□□ 0.58
TMC6-224ENST00000593044 BBOX1O75936 387 aa18.68■□□□□ 0.58
TMC6-224ENST00000593044 ZSCAN20P17040 1043 aaPredicted RBP18.68■□□□□ 0.58
TMC6-224ENST00000593044 OLFM4Q6UX06 510 aa18.68■□□□□ 0.58
TMC6-224ENST00000593044 CCAR1Q8IX12 1150 aaKnown RBP18.68■□□□□ 0.58
TMC6-224ENST00000593044 ZNF396Q96N95 335 aaPredicted RBP18.68■□□□□ 0.58
TMC6-224ENST00000593044 CD209Q9NNX6 404 aa18.68■□□□□ 0.58
TMC6-224ENST00000593044 KIF28PB7ZC32 967 aa18.68■□□□□ 0.58
TMC6-224ENST00000593044 RIMBP2O15034 1052 aa18.67■□□□□ 0.58
TMC6-224ENST00000593044 NAA30Q147X3 362 aaPredicted RBP18.67■□□□□ 0.58
TMC6-224ENST00000593044 MCM9Q9NXL9 1143 aa18.67■□□□□ 0.58
TMC6-224ENST00000593044 ATP2B4P23634 1241 aa18.67■□□□□ 0.58
TMC6-224ENST00000593044 CCDC88AQ3V6T2 1871 aa18.67■□□□□ 0.58
TMC6-224ENST00000593044 PLSCR1O15162 318 aa18.66■□□□□ 0.58
TMC6-224ENST00000593044 USP17L8P0C7I0 530 aa18.66■□□□□ 0.58
TMC6-224ENST00000593044 ME1P48163 572 aa18.66■□□□□ 0.58
TMC6-224ENST00000593044 RTN1Q16799 776 aa18.66■□□□□ 0.58
TMC6-224ENST00000593044 FAM47AQ5JRC9 791 aa18.66■□□□□ 0.58
TMC6-224ENST00000593044 ZNF654Q8IZM8 581 aa18.66■□□□□ 0.58
TMC6-224ENST00000593044 PDCL2Q8N4E4 241 aa18.66■□□□□ 0.58
TMC6-224ENST00000593044 TBC1D16Q8TBP0 767 aa18.66■□□□□ 0.58
TMC6-224ENST00000593044 RCOR1Q9UKL0 485 aa18.66■□□□□ 0.58
TMC6-224ENST00000593044 TIAM2Q8IVF5 1701 aa18.66■□□□□ 0.58
TMC6-224ENST00000593044 RXRBP28702 533 aa18.66■□□□□ 0.58
TMC6-224ENST00000593044 USP5P45974 858 aa18.66■□□□□ 0.58
TMC6-224ENST00000593044 SSRP1Q08945 709 aaKnown RBP18.66■□□□□ 0.58
TMC6-224ENST00000593044 KRT40Q6A162 431 aa18.66■□□□□ 0.58
TMC6-224ENST00000593044 PAXIP1Q6ZW49 1069 aaPredicted RBP18.66■□□□□ 0.58
TMC6-224ENST00000593044 NLGN1Q8N2Q7 840 aa18.66■□□□□ 0.58
TMC6-224ENST00000593044 SH3RF3Q8TEJ3 882 aaPredicted RBP18.66■□□□□ 0.58
TMC6-224ENST00000593044 U2AF2P26368 475 aaKnown RBP eCLIP18.65■□□□□ 0.584e-7■■□□□ 11.8
TMC6-224ENST00000593044 GNL2Q13823 731 aaKnown RBP18.65■□□□□ 0.58
TMC6-224ENST00000593044 AKT1S1Q96B36 256 aa18.65■□□□□ 0.58
TMC6-224ENST00000593044 CLIC4Q9Y696 253 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms