RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 TAOK2Q9UL54 1235 aa22.85■■□□□ 1.25
MBD3-209ENST00000592012 TRPC5Q9UL62 973 aaPredicted RBP22.85■■□□□ 1.25
MBD3-209ENST00000592012 USP17L12C9JPN9 530 aa22.84■■□□□ 1.25
MBD3-209ENST00000592012 USP17L21D6R901 530 aa22.84■■□□□ 1.25
MBD3-209ENST00000592012 PCP11498 1178 aaKnown RBP22.84■■□□□ 1.25
MBD3-209ENST00000592012 TRIM22Q8IYM9 498 aa22.84■■□□□ 1.25
MBD3-209ENST00000592012 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.84■■□□□ 1.25
MBD3-209ENST00000592012 GNL2Q13823 731 aaKnown RBP22.84■■□□□ 1.25
MBD3-209ENST00000592012 ENAHQ8N8S7 591 aaPredicted RBP22.84■■□□□ 1.25
MBD3-209ENST00000592012 NUP133Q8WUM0 1156 aa22.84■■□□□ 1.25
MBD3-209ENST00000592012 ZSCAN10Q96SZ4 725 aaPredicted RBP22.84■■□□□ 1.25
MBD3-209ENST00000592012 ANKIB1Q9P2G1 1089 aa22.84■■□□□ 1.25
MBD3-209ENST00000592012 OFD1O75665 1012 aa22.83■■□□□ 1.25
MBD3-209ENST00000592012 WDHD1O75717 1129 aaPredicted RBP22.83■■□□□ 1.25
MBD3-209ENST00000592012 TMED8Q6PL24 325 aaPredicted RBP22.83■■□□□ 1.25
MBD3-209ENST00000592012 SLC51AQ86UW1 340 aa22.83■■□□□ 1.25
MBD3-209ENST00000592012 MAP3K14Q99558 947 aa22.83■■□□□ 1.25
MBD3-209ENST00000592012 DCP1AQ9NPI6 582 aaPredicted RBP22.83■■□□□ 1.25
MBD3-209ENST00000592012 DUOX1Q9NRD9 1551 aa22.83■■□□□ 1.25
MBD3-209ENST00000592012 CMA1P23946 247 aa22.83■■□□□ 1.24
MBD3-209ENST00000592012 PTPAQ15257 358 aa22.83■■□□□ 1.24
MBD3-209ENST00000592012 STX1AQ16623 288 aa22.83■■□□□ 1.24
MBD3-209ENST00000592012 CMTR1Q8N1G2 835 aaKnown RBP22.83■■□□□ 1.24
MBD3-209ENST00000592012 CCDC82Q8N4S0 544 aa22.83■■□□□ 1.24
MBD3-209ENST00000592012 ZNF830Q96NB3 372 aaPredicted RBP22.83■■□□□ 1.24
MBD3-209ENST00000592012 JAG2Q9Y219 1238 aa22.83■■□□□ 1.24
MBD3-209ENST00000592012 LEMD3Q9Y2U8 911 aa22.83■■□□□ 1.24
MBD3-209ENST00000592012 PRDM1O75626 825 aa22.82■■□□□ 1.24
MBD3-209ENST00000592012 SDF4Q9BRK5 362 aa22.82■■□□□ 1.24
MBD3-209ENST00000592012 CRNKL1Q9BZJ0 848 aaKnown RBP22.82■■□□□ 1.24
MBD3-209ENST00000592012 CCDC88AQ3V6T2 1871 aa22.82■■□□□ 1.24
MBD3-209ENST00000592012 DEXIO95424 95 aa22.82■■□□□ 1.24
MBD3-209ENST00000592012 MARCKSP29966 332 aaPredicted RBP22.82■■□□□ 1.24
MBD3-209ENST00000592012 IQCB1Q15051 598 aa22.82■■□□□ 1.24
MBD3-209ENST00000592012 PPP2R5BQ15173 497 aa22.82■■□□□ 1.24
MBD3-209ENST00000592012 PRR5LQ6MZQ0 368 aa22.82■■□□□ 1.24
MBD3-209ENST00000592012 ATP8A2Q9NTI2 1148 aa22.82■■□□□ 1.24
MBD3-209ENST00000592012 PPP6R2O75170 966 aa22.81■■□□□ 1.24
MBD3-209ENST00000592012 MMP1P03956 469 aa22.81■■□□□ 1.24
MBD3-209ENST00000592012 C11orf57Q6ZUT1 292 aaPredicted RBP22.81■■□□□ 1.24
MBD3-209ENST00000592012 EVX2Q03828 476 aa22.81■■□□□ 1.24
MBD3-209ENST00000592012 TTC12Q9H892 705 aaPredicted RBP22.81■■□□□ 1.24
MBD3-209ENST00000592012 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.81■■□□□ 1.24
MBD3-209ENST00000592012 BTBD18B2RXH4 712 aa22.8■■□□□ 1.24
MBD3-209ENST00000592012 SPTY2D1Q68D10 685 aaPredicted RBP22.8■■□□□ 1.24
MBD3-209ENST00000592012 IQCA1Q86XH1 822 aa22.8■■□□□ 1.24
MBD3-209ENST00000592012 NOSTRINQ8IVI9 506 aa22.8■■□□□ 1.24
MBD3-209ENST00000592012 ERCC4Q92889 916 aaPredicted RBP22.8■■□□□ 1.24
MBD3-209ENST00000592012 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.8■■□□□ 1.24
MBD3-209ENST00000592012 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.79■■□□□ 1.24
MBD3-209ENST00000592012 ZNF202O95125 648 aa22.79■■□□□ 1.24
MBD3-209ENST00000592012 GYS1P13807 737 aa22.79■■□□□ 1.24
MBD3-209ENST00000592012 NAP1L5Q96NT1 182 aaPredicted RBP22.79■■□□□ 1.24
MBD3-209ENST00000592012 KCNJ14Q9UNX9 436 aa22.79■■□□□ 1.24
MBD3-209ENST00000592012 IFIT1BQ5T764 474 aaKnown RBP22.79■■□□□ 1.24
MBD3-209ENST00000592012 ANO10Q9NW15 660 aa22.79■■□□□ 1.24
MBD3-209ENST00000592012 UBR3Q6ZT12 1888 aa22.79■■□□□ 1.24
MBD3-209ENST00000592012 XDHP47989 1333 aa22.79■■□□□ 1.24
MBD3-209ENST00000592012 ORC4O43929 436 aa22.78■■□□□ 1.24
MBD3-209ENST00000592012 PFKFB1P16118 471 aa22.78■■□□□ 1.24
MBD3-209ENST00000592012 SAFBQ15424 915 aaKnown RBP eCLIP22.78■■□□□ 1.24
MBD3-209ENST00000592012 DIS3L2Q8IYB7 885 aaKnown RBP22.78■■□□□ 1.24
MBD3-209ENST00000592012 JMYQ8N9B5 988 aa22.78■■□□□ 1.24
MBD3-209ENST00000592012 KIAA1468Q9P260 1216 aa22.78■■□□□ 1.24
MBD3-209ENST00000592012 A0A087WWV3 80 aa22.78■■□□□ 1.24
MBD3-209ENST00000592012 SBK1Q52WX2 424 aa22.78■■□□□ 1.24
MBD3-209ENST00000592012 DZIP1Q86YF9 867 aaKnown RBP22.78■■□□□ 1.24
MBD3-209ENST00000592012 SPC24Q8NBT2 197 aa22.78■■□□□ 1.24
MBD3-209ENST00000592012 WDR66Q8TBY9 1149 aa22.78■■□□□ 1.24
MBD3-209ENST00000592012 FOXP1Q9H334 677 aaPredicted RBP22.78■■□□□ 1.24
MBD3-209ENST00000592012 MROH7-TTC4A0A0A0MT08 1334 aa22.78■■□□□ 1.24
MBD3-209ENST00000592012 KIAA2012Q0VF49 1180 aa22.77■■□□□ 1.24
MBD3-209ENST00000592012 TROAPQ12815 778 aa22.77■■□□□ 1.24
MBD3-209ENST00000592012 CRY2Q49AN0 593 aa22.77■■□□□ 1.24
MBD3-209ENST00000592012 CATIPQ7Z7H3 387 aa22.77■■□□□ 1.24
MBD3-209ENST00000592012 PLA2G4DQ86XP0 818 aa22.77■■□□□ 1.24
MBD3-209ENST00000592012 RNF26Q9BY78 433 aaPredicted RBP22.77■■□□□ 1.24
MBD3-209ENST00000592012 MAST2Q6P0Q8 1798 aa22.77■■□□□ 1.24
MBD3-209ENST00000592012 FUT2Q10981 343 aa22.77■■□□□ 1.24
MBD3-209ENST00000592012 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.77■■□□□ 1.24
MBD3-209ENST00000592012 ARPP21Q9UBL0 812 aaPredicted RBP22.77■■□□□ 1.24
MBD3-209ENST00000592012 MYH6P13533 1939 aa22.76■■□□□ 1.23
MBD3-209ENST00000592012 IGSF3O75054 1194 aa22.76■■□□□ 1.23
MBD3-209ENST00000592012 TOB1P50616 345 aaPredicted RBP22.76■■□□□ 1.23
MBD3-209ENST00000592012 SHC4Q6S5L8 630 aa22.76■■□□□ 1.23
MBD3-209ENST00000592012 C15orf52Q6ZUT6 534 aaKnown RBP22.76■■□□□ 1.23
MBD3-209ENST00000592012 TRIM5Q9C035 493 aa22.76■■□□□ 1.23
MBD3-209ENST00000592012 QTRT2Q9H974 415 aaKnown RBP22.76■■□□□ 1.23
MBD3-209ENST00000592012 HPSEQ9Y251 543 aa22.76■■□□□ 1.23
MBD3-209ENST00000592012 CYP2D6P10635 497 aa22.76■■□□□ 1.23
MBD3-209ENST00000592012 ZNF75DP51815 510 aa22.76■■□□□ 1.23
MBD3-209ENST00000592012 SLC27A3Q5K4L6 730 aa22.76■■□□□ 1.23
MBD3-209ENST00000592012 RPGRQ92834 1020 aaKnown RBP22.76■■□□□ 1.23
MBD3-209ENST00000592012 FAM237AA0A1B0GTK4 181 aa22.75■■□□□ 1.23
MBD3-209ENST00000592012 SERPINB2P05120 415 aa22.75■■□□□ 1.23
MBD3-209ENST00000592012 LDHBP07195 334 aaKnown RBP22.75■■□□□ 1.23
MBD3-209ENST00000592012 DLEC1Q9Y238 1755 aa22.75■■□□□ 1.23
MBD3-209ENST00000592012 GOLGA6L6A8MZA4 724 aa22.75■■□□□ 1.23
MBD3-209ENST00000592012 GOLGA6L19H0YKK7 550 aa22.75■■□□□ 1.23
MBD3-209ENST00000592012 TPM3P06753 285 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms