RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 NOL9Q5SY16 702 aaKnown RBP12.14□□□□□ -0.47
BRCA1-227ENST00000591849 IFNL1Q8IU54 200 aa12.14□□□□□ -0.47
BRCA1-227ENST00000591849 AMOTL1Q8IY63 956 aa12.14□□□□□ -0.47
BRCA1-227ENST00000591849 SCYL3Q8IZE3 742 aa12.14□□□□□ -0.47
BRCA1-227ENST00000591849 KBTBD3Q8NAB2 608 aa12.14□□□□□ -0.47
BRCA1-227ENST00000591849 OTUD7AQ8TE49 926 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-227ENST00000591849 FSD1Q9BTV5 496 aa12.14□□□□□ -0.47
BRCA1-227ENST00000591849 ARMT1Q9H993 441 aa12.14□□□□□ -0.47
BRCA1-227ENST00000591849 HERC5Q9UII4 1024 aaKnown RBP12.14□□□□□ -0.47
BRCA1-227ENST00000591849 ZHX2Q9Y6X8 837 aa12.14□□□□□ -0.47
BRCA1-227ENST00000591849 CCDC85CA6NKD9 419 aa12.13□□□□□ -0.47
BRCA1-227ENST00000591849 IRF6O14896 467 aa12.13□□□□□ -0.47
BRCA1-227ENST00000591849 RNF113AO15541 343 aaKnown RBP12.13□□□□□ -0.47
BRCA1-227ENST00000591849 ZFYP08048 801 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-227ENST00000591849 MAP3K10Q02779 954 aa12.13□□□□□ -0.47
BRCA1-227ENST00000591849 CHD1LQ86WJ1 897 aa12.13□□□□□ -0.47
BRCA1-227ENST00000591849 LCORLQ8N3X6 602 aa12.13□□□□□ -0.47
BRCA1-227ENST00000591849 RIOK1Q9BRS2 568 aaKnown RBP12.13□□□□□ -0.47
BRCA1-227ENST00000591849 MCM9Q9NXL9 1143 aa12.13□□□□□ -0.47
BRCA1-227ENST00000591849 SLC4A4Q9Y6R1 1079 aa12.13□□□□□ -0.47
BRCA1-227ENST00000591849 RFX7Q2KHR2 1363 aa12.13□□□□□ -0.47
BRCA1-227ENST00000591849 ATRNL1Q5VV63 1379 aa12.13□□□□□ -0.47
BRCA1-227ENST00000591849 AK9Q5TCS8 1911 aa12.13□□□□□ -0.47
BRCA1-227ENST00000591849 TCRBV5S4A2TA0A5A2 114 aa12.12□□□□□ -0.47
BRCA1-227ENST00000591849 PHF20L1A8MW92 1017 aa12.12□□□□□ -0.47
BRCA1-227ENST00000591849 SLURP2P0DP57 97 aa12.12□□□□□ -0.47
BRCA1-227ENST00000591849 SLFNL1Q499Z3 407 aa12.12□□□□□ -0.47
BRCA1-227ENST00000591849 SMC5Q8IY18 1101 aa12.12□□□□□ -0.47
BRCA1-227ENST00000591849 LAMB1P07942 1786 aa12.12□□□□□ -0.47
BRCA1-227ENST00000591849 TRIM6-TRIM34B2RNG4 842 aa12.11□□□□□ -0.47
BRCA1-227ENST00000591849 IGF2BP3O00425 579 aaKnown RBP eCLIP12.11□□□□□ -0.47
BRCA1-227ENST00000591849 CXCL11O14625 94 aa12.11□□□□□ -0.47
BRCA1-227ENST00000591849 PRKAB2O43741 272 aa12.11□□□□□ -0.47
BRCA1-227ENST00000591849 PTPRAP18433 802 aa12.11□□□□□ -0.47
BRCA1-227ENST00000591849 CAP2P40123 477 aa12.11□□□□□ -0.47
BRCA1-227ENST00000591849 PDE1AP54750 535 aa12.11□□□□□ -0.47
BRCA1-227ENST00000591849 TAF1CQ15572 869 aaPredicted RBP12.11□□□□□ -0.47
BRCA1-227ENST00000591849 PI4K2BQ8TCG2 481 aa12.11□□□□□ -0.47
BRCA1-227ENST00000591849 SDR42E1Q8WUS8 393 aa12.11□□□□□ -0.47
BRCA1-227ENST00000591849 BRI3BPQ8WY22 251 aa12.11□□□□□ -0.47
BRCA1-227ENST00000591849 APPBP2Q92624 585 aa12.11□□□□□ -0.47
BRCA1-227ENST00000591849 MS4A4AQ96JQ5 239 aa12.11□□□□□ -0.47
BRCA1-227ENST00000591849 AS3MTQ9HBK9 375 aa12.11□□□□□ -0.47
BRCA1-227ENST00000591849 ZFYVE28Q9HCC9 887 aa12.11□□□□□ -0.47
BRCA1-227ENST00000591849 ATP8A2Q9NTI2 1148 aa12.11□□□□□ -0.47
BRCA1-227ENST00000591849 SERPINB13Q9UIV8 391 aa12.11□□□□□ -0.47
BRCA1-227ENST00000591849 COL2A1P02458 1487 aaPredicted RBP12.1□□□□□ -0.47
BRCA1-227ENST00000591849 TESPA1A2RU30 521 aaPredicted RBP12.1□□□□□ -0.47
BRCA1-227ENST00000591849 TRIM75PA6NK02 468 aa12.1□□□□□ -0.47
BRCA1-227ENST00000591849 USP17L5A8MUK1 530 aa12.1□□□□□ -0.47
BRCA1-227ENST00000591849 GPR25O00155 361 aa12.1□□□□□ -0.47
BRCA1-227ENST00000591849 FKTNO75072 461 aa12.1□□□□□ -0.47
BRCA1-227ENST00000591849 APPP05067 770 aa12.1□□□□□ -0.47
BRCA1-227ENST00000591849 RGS19P49795 217 aa12.1□□□□□ -0.47
BRCA1-227ENST00000591849 NUCB1Q02818 461 aa12.1□□□□□ -0.47
BRCA1-227ENST00000591849 MLLT1Q03111 559 aaPredicted RBP12.1□□□□□ -0.47
BRCA1-227ENST00000591849 GADL1Q6ZQY3 521 aa12.1□□□□□ -0.47
BRCA1-227ENST00000591849 FASTKD5Q7L8L6 764 aaKnown RBP12.1□□□□□ -0.47
BRCA1-227ENST00000591849 EVI5LQ96CN4 794 aa12.1□□□□□ -0.47
BRCA1-227ENST00000591849 PTPN18Q99952 460 aa12.1□□□□□ -0.47
BRCA1-227ENST00000591849 PUS7LQ9H0K6 701 aaKnown RBP12.1□□□□□ -0.47
BRCA1-227ENST00000591849 CABP5Q9NP86 173 aa12.1□□□□□ -0.47
BRCA1-227ENST00000591849 STAP2Q9UGK3 403 aa12.1□□□□□ -0.47
BRCA1-227ENST00000591849 TNRC18O15417 2968 aaPredicted RBP12.09□□□□□ -0.47
BRCA1-227ENST00000591849 GDF11O95390 407 aa12.09□□□□□ -0.47
BRCA1-227ENST00000591849 CHGBP05060 677 aa12.09□□□□□ -0.47
BRCA1-227ENST00000591849 ASNSP08243 561 aa12.09□□□□□ -0.47
BRCA1-227ENST00000591849 CERKLQ49MI3 558 aaPredicted RBP12.09□□□□□ -0.47
BRCA1-227ENST00000591849 RILPL2Q969X0 211 aa12.09□□□□□ -0.47
BRCA1-227ENST00000591849 TBC1D2Q9BYX2 928 aa12.09□□□□□ -0.47
BRCA1-227ENST00000591849 MCOLN1Q9GZU1 580 aa12.09□□□□□ -0.47
BRCA1-227ENST00000591849 DCP1AQ9NPI6 582 aaPredicted RBP12.09□□□□□ -0.47
BRCA1-227ENST00000591849 KCNH4Q9UQ05 1017 aa12.09□□□□□ -0.47
BRCA1-227ENST00000591849 BTBD19C9JJ37 291 aa12.08□□□□□ -0.48
BRCA1-227ENST00000591849 MPHOSPH10O00566 681 aaKnown RBP12.08□□□□□ -0.48
BRCA1-227ENST00000591849 NEFLP07196 543 aa12.08□□□□□ -0.48
BRCA1-227ENST00000591849 GNAT2P19087 354 aa12.08□□□□□ -0.48
BRCA1-227ENST00000591849 PLCD1P51178 756 aa12.08□□□□□ -0.48
BRCA1-227ENST00000591849 SPP2Q13103 211 aa12.08□□□□□ -0.48
BRCA1-227ENST00000591849 CRHR2Q13324 411 aa12.08□□□□□ -0.48
BRCA1-227ENST00000591849 DGKZQ13574 1117 aa12.08□□□□□ -0.48
BRCA1-227ENST00000591849 CCDC84Q86UT8 332 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-227ENST00000591849 FAM43AQ8N2R8 423 aa12.08□□□□□ -0.48
BRCA1-227ENST00000591849 ZNF280CQ8ND82 737 aa12.08□□□□□ -0.48
BRCA1-227ENST00000591849 ZNF296Q8WUU4 475 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-227ENST00000591849 OSBP2Q969R2 916 aa12.08□□□□□ -0.48
BRCA1-227ENST00000591849 STRBPQ96SI9 672 aaKnown RBP12.08□□□□□ -0.48
BRCA1-227ENST00000591849 NACAP1Q9BZK3 213 aa12.08□□□□□ -0.48
BRCA1-227ENST00000591849 EHD4Q9H223 541 aa12.08□□□□□ -0.48
BRCA1-227ENST00000591849 GINM1Q9NU53 330 aa12.08□□□□□ -0.48
BRCA1-227ENST00000591849 AFG3L2Q9Y4W6 797 aa12.08□□□□□ -0.48
BRCA1-227ENST00000591849 USP17L12C9JPN9 530 aa12.07□□□□□ -0.48
BRCA1-227ENST00000591849 USP17L21D6R901 530 aa12.07□□□□□ -0.48
BRCA1-227ENST00000591849 PDHXO00330 501 aa12.07□□□□□ -0.48
BRCA1-227ENST00000591849 GPAA1O43292 621 aa12.07□□□□□ -0.48
BRCA1-227ENST00000591849 CYP2D6P10635 497 aa12.07□□□□□ -0.48
BRCA1-227ENST00000591849 TDO2P48775 406 aa12.07□□□□□ -0.48
BRCA1-227ENST00000591849 RAB3GAP1Q15042 981 aa12.07□□□□□ -0.48
BRCA1-227ENST00000591849 ARHGEF6Q15052 776 aa12.07□□□□□ -0.48
BRCA1-227ENST00000591849 ABCB5Q2M3G0 1257 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms