RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 SEC23AQ15436 765 aa13.15□□□□□ -0.3
TPM4-213ENST00000591226 RTN1Q16799 776 aa13.15□□□□□ -0.3
TPM4-213ENST00000591226 ZNF654Q8IZM8 581 aa13.15□□□□□ -0.3
TPM4-213ENST00000591226 SLC26A6Q9BXS9 759 aa13.15□□□□□ -0.3
TPM4-213ENST00000591226 ATP8A2Q9NTI2 1148 aa13.15□□□□□ -0.3
TPM4-213ENST00000591226 ANKRD31Q8N7Z5 1873 aa13.15□□□□□ -0.3
TPM4-213ENST00000591226 BBOX1O75936 387 aa13.15□□□□□ -0.31
TPM4-213ENST00000591226 DIXDC1Q155Q3 683 aa13.15□□□□□ -0.31
TPM4-213ENST00000591226 BRAPQ7Z569 592 aa13.15□□□□□ -0.31
TPM4-213ENST00000591226 COL23A1Q86Y22 540 aaPredicted RBP13.15□□□□□ -0.31
TPM4-213ENST00000591226 AKT1S1Q96B36 256 aa13.15□□□□□ -0.31
TPM4-213ENST00000591226 DDX19AQ9NUU7 478 aaKnown RBP13.15□□□□□ -0.31
TPM4-213ENST00000591226 KLRG2A4D1S0 409 aaPredicted RBP13.14□□□□□ -0.31
TPM4-213ENST00000591226 SSRP1Q08945 709 aaKnown RBP13.14□□□□□ -0.31
TPM4-213ENST00000591226 MAP3K11Q16584 847 aa13.14□□□□□ -0.31
TPM4-213ENST00000591226 MYSM1Q5VVJ2 828 aa13.14□□□□□ -0.31
TPM4-213ENST00000591226 KRT40Q6A162 431 aa13.14□□□□□ -0.31
TPM4-213ENST00000591226 TMED8Q6PL24 325 aaPredicted RBP13.14□□□□□ -0.31
TPM4-213ENST00000591226 TMTC2Q8N394 836 aa13.14□□□□□ -0.31
TPM4-213ENST00000591226 ENAHQ8N8S7 591 aaPredicted RBP13.14□□□□□ -0.31
TPM4-213ENST00000591226 TRIM44Q96DX7 344 aaPredicted RBP13.14□□□□□ -0.31
TPM4-213ENST00000591226 CRAMP1Q96RY5 1269 aa13.14□□□□□ -0.31
TPM4-213ENST00000591226 CLSTN2Q9H4D0 955 aa13.14□□□□□ -0.31
TPM4-213ENST00000591226 CD209Q9NNX6 404 aa13.14□□□□□ -0.31
TPM4-213ENST00000591226 STK36Q9NRP7 1315 aa13.14□□□□□ -0.31
TPM4-213ENST00000591226 PLSCR1O15162 318 aa13.14□□□□□ -0.31
TPM4-213ENST00000591226 FMNL1O95466 1100 aaPredicted RBP13.14□□□□□ -0.31
TPM4-213ENST00000591226 FGRP09769 529 aa13.14□□□□□ -0.31
TPM4-213ENST00000591226 IFNAR1P17181 557 aa13.14□□□□□ -0.31
TPM4-213ENST00000591226 NUP133Q8WUM0 1156 aa13.14□□□□□ -0.31
TPM4-213ENST00000591226 ZSCAN10Q96SZ4 725 aaPredicted RBP13.14□□□□□ -0.31
TPM4-213ENST00000591226 TNMDQ9H2S6 317 aa13.14□□□□□ -0.31
TPM4-213ENST00000591226 RTEL1Q9NZ71 1219 aa13.14□□□□□ -0.31
TPM4-213ENST00000591226 POLLQ9UGP5 575 aa13.14□□□□□ -0.31
TPM4-213ENST00000591226 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.14□□□□□ -0.31
TPM4-213ENST00000591226 CLIC4Q9Y696 253 aa13.14□□□□□ -0.31
TPM4-213ENST00000591226 PCP11498 1178 aaKnown RBP13.13□□□□□ -0.31
TPM4-213ENST00000591226 ME1P48163 572 aa13.13□□□□□ -0.31
TPM4-213ENST00000591226 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.13□□□□□ -0.31
TPM4-213ENST00000591226 CMTR1Q8N1G2 835 aaKnown RBP13.13□□□□□ -0.31
TPM4-213ENST00000591226 TBC1D16Q8TBP0 767 aa13.13□□□□□ -0.31
TPM4-213ENST00000591226 PDLIM2Q96JY6 352 aa13.13□□□□□ -0.31
TPM4-213ENST00000591226 GOLPH3LQ9H4A5 285 aa13.13□□□□□ -0.31
TPM4-213ENST00000591226 LRRC37AA6NMS7 1700 aa13.13□□□□□ -0.31
TPM4-213ENST00000591226 GUCY1A2P33402 732 aa13.13□□□□□ -0.31
TPM4-213ENST00000591226 SLC4A8Q2Y0W8 1093 aa13.13□□□□□ -0.31
TPM4-213ENST00000591226 CCAR1Q8IX12 1150 aaKnown RBP13.13□□□□□ -0.31
TPM4-213ENST00000591226 CKAP2LQ8IYA6 745 aa13.13□□□□□ -0.31
TPM4-213ENST00000591226 RGS22Q8NE09 1264 aa13.13□□□□□ -0.31
TPM4-213ENST00000591226 SH3RF3Q8TEJ3 882 aaPredicted RBP13.13□□□□□ -0.31
TPM4-213ENST00000591226 ARPP21Q9UBL0 812 aaPredicted RBP13.13□□□□□ -0.31
TPM4-213ENST00000591226 LTBP1Q14766 1721 aa13.12□□□□□ -0.31
TPM4-213ENST00000591226 PPEF1O14829 653 aaPredicted RBP13.12□□□□□ -0.31
TPM4-213ENST00000591226 RCAN1P53805 252 aa13.12□□□□□ -0.31
TPM4-213ENST00000591226 CCDC82Q8N4S0 544 aa13.12□□□□□ -0.31
TPM4-213ENST00000591226 FANCBQ8NB91 859 aa13.12□□□□□ -0.31
TPM4-213ENST00000591226 MCM9Q9NXL9 1143 aa13.12□□□□□ -0.31
TPM4-213ENST00000591226 C6orf229H3BNL8 230 aa13.12□□□□□ -0.31
TPM4-213ENST00000591226 ORC4O43929 436 aa13.12□□□□□ -0.31
TPM4-213ENST00000591226 USP17L8P0C7I0 530 aa13.12□□□□□ -0.31
TPM4-213ENST00000591226 IL1R1P14778 569 aa13.12□□□□□ -0.31
TPM4-213ENST00000591226 HMGB2P26583 209 aaKnown RBP13.12□□□□□ -0.31
TPM4-213ENST00000591226 CLCN1P35523 988 aa13.12□□□□□ -0.31
TPM4-213ENST00000591226 GSTO1P78417 241 aa13.12□□□□□ -0.31
TPM4-213ENST00000591226 STK38Q15208 465 aa13.12□□□□□ -0.31
TPM4-213ENST00000591226 SBK1Q52WX2 424 aa13.12□□□□□ -0.31
TPM4-213ENST00000591226 IFIT1BQ5T764 474 aaKnown RBP13.12□□□□□ -0.31
TPM4-213ENST00000591226 NBPF11Q86T75 865 aa13.12□□□□□ -0.31
TPM4-213ENST00000591226 NLGN1Q8N2Q7 840 aa13.12□□□□□ -0.31
TPM4-213ENST00000591226 LINC00301Q8NCQ3 95 aa13.12□□□□□ -0.31
TPM4-213ENST00000591226 POLR3EQ9NVU0 708 aa13.12□□□□□ -0.31
TPM4-213ENST00000591226 DLEC1Q9Y238 1755 aa13.12□□□□□ -0.31
TPM4-213ENST00000591226 NRXN2Q9P2S2 1712 aa13.12□□□□□ -0.31
TPM4-213ENST00000591226 CCDC192P0DO97 292 aa13.11□□□□□ -0.31
TPM4-213ENST00000591226 TRIM29Q14134 588 aa13.11□□□□□ -0.31
TPM4-213ENST00000591226 SAMD1Q6SPF0 538 aaPredicted RBP13.11□□□□□ -0.31
TPM4-213ENST00000591226 IQCA1Q86XH1 822 aa13.11□□□□□ -0.31
TPM4-213ENST00000591226 PCDHA7Q9UN72 937 aa13.11□□□□□ -0.31
TPM4-213ENST00000591226 MROH7-TTC4A0A0A0MT08 1334 aa13.11□□□□□ -0.31
TPM4-213ENST00000591226 CCDC196A0A1B0GTZ2 297 aa13.11□□□□□ -0.31
TPM4-213ENST00000591226 NMT2O60551 498 aa13.11□□□□□ -0.31
TPM4-213ENST00000591226 YEATS4O95619 227 aa13.11□□□□□ -0.31
TPM4-213ENST00000591226 USP5P45974 858 aa13.11□□□□□ -0.31
TPM4-213ENST00000591226 FAM47AQ5JRC9 791 aa13.11□□□□□ -0.31
TPM4-213ENST00000591226 RBM43Q6ZSC3 357 aaKnown RBP13.11□□□□□ -0.31
TPM4-213ENST00000591226 TRIM22Q8IYM9 498 aa13.11□□□□□ -0.31
TPM4-213ENST00000591226 CRACR2BQ8N4Y2 399 aaPredicted RBP13.11□□□□□ -0.31
TPM4-213ENST00000591226 SLC24A3Q9HC58 644 aa13.11□□□□□ -0.31
TPM4-213ENST00000591226 MKRN1Q9UHC7 482 aaKnown RBP13.11□□□□□ -0.31
TPM4-213ENST00000591226 SLC3A2P08195 630 aaKnown RBP13.1□□□□□ -0.31
TPM4-213ENST00000591226 TYRO3Q06418 890 aa13.1□□□□□ -0.31
TPM4-213ENST00000591226 GNL2Q13823 731 aaKnown RBP13.1□□□□□ -0.31
TPM4-213ENST00000591226 UVSSAQ2YD98 709 aa13.1□□□□□ -0.31
TPM4-213ENST00000591226 CCDC73Q6ZRK6 1079 aa13.1□□□□□ -0.31
TPM4-213ENST00000591226 FSIP1Q8NA03 581 aa13.1□□□□□ -0.31
TPM4-213ENST00000591226 WASF1Q92558 559 aa13.1□□□□□ -0.31
TPM4-213ENST00000591226 BAG3O95817 575 aa13.1□□□□□ -0.31
TPM4-213ENST00000591226 SF3A1Q15459 793 aaKnown RBP13.1□□□□□ -0.31
TPM4-213ENST00000591226 ANO1Q5XXA6 986 aa13.1□□□□□ -0.31
TPM4-213ENST00000591226 CATIPQ7Z7H3 387 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms