RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 SERPINB13Q9UIV8 391 aa20.33■□□□□ 0.84
RPRD1A-209ENST00000590898 U3KPZ7 1027 aaPredicted RBP20.33■□□□□ 0.84
RPRD1A-209ENST00000590898 SIPA1L1O43166 1804 aa20.32■□□□□ 0.84
RPRD1A-209ENST00000590898 ANAPC4Q9UJX5 808 aa20.32■□□□□ 0.84
RPRD1A-209ENST00000590898 MINDY4BA8MYZ0 360 aa20.31■□□□□ 0.84
RPRD1A-209ENST00000590898 FKBP1BP68106 108 aa20.31■□□□□ 0.84
RPRD1A-209ENST00000590898 GABPAQ06546 454 aa20.31■□□□□ 0.84
RPRD1A-209ENST00000590898 LAMB1P07942 1786 aa20.31■□□□□ 0.84
RPRD1A-209ENST00000590898 SLC3A2P08195 630 aaKnown RBP20.3■□□□□ 0.84
RPRD1A-209ENST00000590898 ANP32AP39687 249 aaKnown RBP20.3■□□□□ 0.84
RPRD1A-209ENST00000590898 PPARAQ07869 468 aa20.3■□□□□ 0.84
RPRD1A-209ENST00000590898 CRACR2BQ8N4Y2 399 aaPredicted RBP20.3■□□□□ 0.84
RPRD1A-209ENST00000590898 SWAP70Q9UH65 585 aa20.3■□□□□ 0.84
RPRD1A-209ENST00000590898 MYH8P13535 1937 aa20.3■□□□□ 0.84
RPRD1A-209ENST00000590898 SSC5DA1L4H1 1573 aa20.29■□□□□ 0.84
RPRD1A-209ENST00000590898 ZNF213O14771 459 aa20.29■□□□□ 0.84
RPRD1A-209ENST00000590898 CELF2O95319 508 aaKnown RBP20.29■□□□□ 0.84
RPRD1A-209ENST00000590898 CYP2D6P10635 497 aa20.29■□□□□ 0.84
RPRD1A-209ENST00000590898 FMR1Q06787 632 aaKnown RBP eCLIP20.29■□□□□ 0.843e-12■■■■■ 52.5
RPRD1A-209ENST00000590898 MAP3K11Q16584 847 aa20.29■□□□□ 0.84
RPRD1A-209ENST00000590898 CST9Q5W186 159 aa20.29■□□□□ 0.84
RPRD1A-209ENST00000590898 MIGA2Q7L4E1 593 aa20.29■□□□□ 0.84
RPRD1A-209ENST00000590898 ZNF341Q9BYN7 854 aa20.29■□□□□ 0.84
RPRD1A-209ENST00000590898 ROBO3Q96MS0 1386 aa20.29■□□□□ 0.84
RPRD1A-209ENST00000590898 LAMA4Q16363 1823 aa20.29■□□□□ 0.84
RPRD1A-209ENST00000590898 CYP2D7A0A087X1C5 515 aa20.29■□□□□ 0.84
RPRD1A-209ENST00000590898 UNCXA6NJT0 531 aa20.29■□□□□ 0.84
RPRD1A-209ENST00000590898 USP2O75604 605 aaPredicted RBP20.29■□□□□ 0.84
RPRD1A-209ENST00000590898 IMMTQ16891 758 aaKnown RBP20.29■□□□□ 0.84
RPRD1A-209ENST00000590898 TRIM34Q9BYJ4 488 aa20.29■□□□□ 0.84
RPRD1A-209ENST00000590898 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.29■□□□□ 0.841e-6■■■□□ 18.2
RPRD1A-209ENST00000590898 ZNF287Q9HBT7 754 aa20.29■□□□□ 0.84
RPRD1A-209ENST00000590898 ZNF112Q9UJU3 913 aa20.29■□□□□ 0.84
RPRD1A-209ENST00000590898 RBM8AQ9Y5S9 174 aaKnown RBP20.29■□□□□ 0.84
RPRD1A-209ENST00000590898 PCP11498 1178 aaKnown RBP20.28■□□□□ 0.84
RPRD1A-209ENST00000590898 NECTIN1Q15223 517 aa20.28■□□□□ 0.84
RPRD1A-209ENST00000590898 SLC4A8Q2Y0W8 1093 aa20.28■□□□□ 0.84
RPRD1A-209ENST00000590898 C16orf86Q6ZW13 317 aa20.28■□□□□ 0.84
RPRD1A-209ENST00000590898 ARMC9Q7Z3E5 817 aa20.28■□□□□ 0.84
RPRD1A-209ENST00000590898 C2orf69Q8N8R5 385 aa20.28■□□□□ 0.84
RPRD1A-209ENST00000590898 KLRG1Q96E93 195 aa20.28■□□□□ 0.84
RPRD1A-209ENST00000590898 TATDN1Q6P1N9 297 aa20.27■□□□□ 0.84
RPRD1A-209ENST00000590898 GBA2Q9HCG7 927 aaPredicted RBP20.27■□□□□ 0.84
RPRD1A-209ENST00000590898 FGRP09769 529 aa20.27■□□□□ 0.84
RPRD1A-209ENST00000590898 IREB2P48200 963 aaKnown RBP20.27■□□□□ 0.84
RPRD1A-209ENST00000590898 PDE4BQ07343 736 aa20.27■□□□□ 0.84
RPRD1A-209ENST00000590898 PAPPA2Q9BXP8 1791 aa20.27■□□□□ 0.84
RPRD1A-209ENST00000590898 USP26Q9BXU7 913 aa20.27■□□□□ 0.84
RPRD1A-209ENST00000590898 DNAJC18Q9H819 358 aa20.27■□□□□ 0.84
RPRD1A-209ENST00000590898 ZNF408Q9H9D4 720 aa20.27■□□□□ 0.84
RPRD1A-209ENST00000590898 PHF20L1A8MW92 1017 aa20.26■□□□□ 0.83
RPRD1A-209ENST00000590898 CDK8P49336 464 aa20.26■□□□□ 0.83
RPRD1A-209ENST00000590898 EVX2Q03828 476 aa20.26■□□□□ 0.83
RPRD1A-209ENST00000590898 SMIM22K7EJ46 135 aa20.25■□□□□ 0.83
RPRD1A-209ENST00000590898 NT5C2P49902 561 aa20.25■□□□□ 0.83
RPRD1A-209ENST00000590898 DYNLL2Q96FJ2 89 aa20.25■□□□□ 0.83
RPRD1A-209ENST00000590898 RNF41Q9H4P4 317 aaPredicted RBP20.25■□□□□ 0.83
RPRD1A-209ENST00000590898 ANGEL1Q9UNK9 670 aaKnown RBP20.25■□□□□ 0.83
RPRD1A-209ENST00000590898 CYP21A2P08686 494 aa20.25■□□□□ 0.83
RPRD1A-209ENST00000590898 SHMT1P34896 483 aa20.25■□□□□ 0.83
RPRD1A-209ENST00000590898 MAP3K9P80192 1104 aa20.25■□□□□ 0.83
RPRD1A-209ENST00000590898 TTLL12Q14166 644 aaPredicted RBP20.25■□□□□ 0.83
RPRD1A-209ENST00000590898 RNF20Q5VTR2 975 aa20.25■□□□□ 0.83
RPRD1A-209ENST00000590898 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.25■□□□□ 0.83
RPRD1A-209ENST00000590898 GINM1Q9NU53 330 aa20.25■□□□□ 0.83
RPRD1A-209ENST00000590898 TMEM88BA6NKF7 163 aa20.24■□□□□ 0.83
RPRD1A-209ENST00000590898 CTNND1O60716 968 aaKnown RBP20.24■□□□□ 0.83
RPRD1A-209ENST00000590898 SLURP2P0DP57 97 aa20.24■□□□□ 0.83
RPRD1A-209ENST00000590898 HAND2P61296 217 aa20.24■□□□□ 0.83
RPRD1A-209ENST00000590898 AKNAD1Q5T1N1 836 aa20.24■□□□□ 0.83
RPRD1A-209ENST00000590898 LDLRAD1Q5T700 205 aa20.24■□□□□ 0.83
RPRD1A-209ENST00000590898 STAG1Q8WVM7 1258 aa20.24■□□□□ 0.83
RPRD1A-209ENST00000590898 CCDC17Q96LX7 622 aa20.24■□□□□ 0.83
RPRD1A-209ENST00000590898 MKNK2Q9HBH9 465 aa20.24■□□□□ 0.83
RPRD1A-209ENST00000590898 FAM196BA6NMK8 535 aa20.23■□□□□ 0.83
RPRD1A-209ENST00000590898 CTDSPL2Q05D32 466 aa20.23■□□□□ 0.83
RPRD1A-209ENST00000590898 PRKG1Q13976 671 aa20.23■□□□□ 0.83
RPRD1A-209ENST00000590898 CREB3L3Q68CJ9 461 aa20.23■□□□□ 0.83
RPRD1A-209ENST00000590898 ANKRD13AQ8IZ07 590 aa20.23■□□□□ 0.83
RPRD1A-209ENST00000590898 WRNIP1Q96S55 665 aa20.23■□□□□ 0.83
RPRD1A-209ENST00000590898 NBPF3Q9H094 633 aa20.23■□□□□ 0.83
RPRD1A-209ENST00000590898 ORC4O43929 436 aa20.23■□□□□ 0.83
RPRD1A-209ENST00000590898 CAP2P40123 477 aa20.23■□□□□ 0.83
RPRD1A-209ENST00000590898 APLP1P51693 650 aa20.23■□□□□ 0.83
RPRD1A-209ENST00000590898 TSGA10IPQ3SY00 556 aa20.23■□□□□ 0.83
RPRD1A-209ENST00000590898 CERKLQ49MI3 558 aaPredicted RBP20.23■□□□□ 0.83
RPRD1A-209ENST00000590898 MFSD6Q6ZSS7 791 aa20.23■□□□□ 0.83
RPRD1A-209ENST00000590898 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.23■□□□□ 0.83
RPRD1A-209ENST00000590898 SLC27A2O14975 620 aa20.22■□□□□ 0.83
RPRD1A-209ENST00000590898 HSPA4P34932 840 aa20.22■□□□□ 0.83
RPRD1A-209ENST00000590898 SLC44A5Q8NCS7 719 aa20.22■□□□□ 0.83
RPRD1A-209ENST00000590898 KCNB2Q92953 911 aa20.22■□□□□ 0.83
RPRD1A-209ENST00000590898 FZD1Q9UP38 647 aa20.22■□□□□ 0.83
RPRD1A-209ENST00000590898 NOL9Q5SY16 702 aaKnown RBP20.21■□□□□ 0.83
RPRD1A-209ENST00000590898 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.21■□□□□ 0.83
RPRD1A-209ENST00000590898 ZNF444Q8N0Y2 327 aaPredicted RBP20.21■□□□□ 0.83
RPRD1A-209ENST00000590898 UBE2Q2LH0YL09 131 aa20.21■□□□□ 0.83
RPRD1A-209ENST00000590898 ZKSCAN1P17029 563 aaPredicted RBP20.21■□□□□ 0.83
RPRD1A-209ENST00000590898 MOB2Q70IA6 237 aa20.21■□□□□ 0.83
RPRD1A-209ENST00000590898 SAPCD2Q86UD0 394 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms