RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.08■■□□□ 1.93
MBD3-208ENST00000590830 KCNH4Q9UQ05 1017 aa27.08■■□□□ 1.93
MBD3-208ENST00000590830 CETPP11597 493 aa27.07■■□□□ 1.92
MBD3-208ENST00000590830 MOGSQ13724 837 aa27.07■■□□□ 1.92
MBD3-208ENST00000590830 ANKRD45Q5TZF3 282 aa27.07■■□□□ 1.92
MBD3-208ENST00000590830 DNAJC18Q9H819 358 aa27.07■■□□□ 1.92
MBD3-208ENST00000590830 IGHDP01880 384 aa27.06■■□□□ 1.92
MBD3-208ENST00000590830 USP5P45974 858 aa27.06■■□□□ 1.92
MBD3-208ENST00000590830 CRHR2Q13324 411 aa27.06■■□□□ 1.92
MBD3-208ENST00000590830 SLC4A8Q2Y0W8 1093 aa27.06■■□□□ 1.92
MBD3-208ENST00000590830 NOM1Q5C9Z4 860 aaKnown RBP27.06■■□□□ 1.92
MBD3-208ENST00000590830 OTUD7BQ6GQQ9 843 aa27.06■■□□□ 1.92
MBD3-208ENST00000590830 FOXP4Q8IVH2 680 aaPredicted RBP27.06■■□□□ 1.92
MBD3-208ENST00000590830 LCORLQ8N3X6 602 aa27.06■■□□□ 1.92
MBD3-208ENST00000590830 PI4K2BQ8TCG2 481 aa27.06■■□□□ 1.92
MBD3-208ENST00000590830 GCC1Q96CN9 775 aa27.06■■□□□ 1.92
MBD3-208ENST00000590830 PICK1Q9NRD5 415 aa27.06■■□□□ 1.92
MBD3-208ENST00000590830 HERC5Q9UII4 1024 aaKnown RBP27.06■■□□□ 1.92
MBD3-208ENST00000590830 ZHX2Q9Y6X8 837 aa27.06■■□□□ 1.92
MBD3-208ENST00000590830 CDK5RAP2Q96SN8 1893 aa27.05■■□□□ 1.92
MBD3-208ENST00000590830 BTBD19C9JJ37 291 aa27.05■■□□□ 1.92
MBD3-208ENST00000590830 CCDC84Q86UT8 332 aaPredicted RBP27.05■■□□□ 1.92
MBD3-208ENST00000590830 GPATCH3Q96I76 525 aa27.05■■□□□ 1.92
MBD3-208ENST00000590830 AFG3L2Q9Y4W6 797 aa27.05■■□□□ 1.92
MBD3-208ENST00000590830 SALL3Q9BXA9 1300 aa27.05■■□□□ 1.92
MBD3-208ENST00000590830 JAG1P78504 1218 aa27.04■■□□□ 1.92
MBD3-208ENST00000590830 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.04■■□□□ 1.92
MBD3-208ENST00000590830 ARMT1Q9H993 441 aa27.04■■□□□ 1.92
MBD3-208ENST00000590830 SIPA1L1O43166 1804 aa27.04■■□□□ 1.92
MBD3-208ENST00000590830 CXCL11O14625 94 aa27.03■■□□□ 1.92
MBD3-208ENST00000590830 CAP2P40123 477 aa27.03■■□□□ 1.92
MBD3-208ENST00000590830 UBE3CQ15386 1083 aa27.03■■□□□ 1.92
MBD3-208ENST00000590830 FOCADQ5VW36 1801 aa27.03■■□□□ 1.92
MBD3-208ENST00000590830 TTC41PQ6P2S7 1318 aa27.03■■□□□ 1.92
MBD3-208ENST00000590830 MCOLN1Q9GZU1 580 aa27.03■■□□□ 1.92
MBD3-208ENST00000590830 DGKZQ13574 1117 aa27.02■■□□□ 1.92
MBD3-208ENST00000590830 KBTBD3Q8NAB2 608 aa27.02■■□□□ 1.92
MBD3-208ENST00000590830 CRNKL1Q9BZJ0 848 aaKnown RBP27.02■■□□□ 1.92
MBD3-208ENST00000590830 PRKAB2O43741 272 aa27.01■■□□□ 1.91
MBD3-208ENST00000590830 MBD4O95243 580 aa27.01■■□□□ 1.91
MBD3-208ENST00000590830 IRX6P78412 446 aaPredicted RBP27.01■■□□□ 1.91
MBD3-208ENST00000590830 EVX2Q03828 476 aa27.01■■□□□ 1.91
MBD3-208ENST00000590830 SHROOM1Q2M3G4 852 aaPredicted RBP27.01■■□□□ 1.91
MBD3-208ENST00000590830 SMC5Q8IY18 1101 aa27.01■■□□□ 1.91
MBD3-208ENST00000590830 SDR42E1Q8WUS8 393 aa27.01■■□□□ 1.91
MBD3-208ENST00000590830 RWDD1Q9H446 243 aaPredicted RBP27.01■■□□□ 1.91
MBD3-208ENST00000590830 FKTNO75072 461 aa27■■□□□ 1.91
MBD3-208ENST00000590830 MX1P20591 662 aa27■■□□□ 1.91
MBD3-208ENST00000590830 PLCD1P51178 756 aa27■■□□□ 1.91
MBD3-208ENST00000590830 GPAT2Q6NUI2 795 aa27■■□□□ 1.91
MBD3-208ENST00000590830 PUS7LQ9H0K6 701 aaKnown RBP27■■□□□ 1.91
MBD3-208ENST00000590830 HLA-DOAP06340 250 aa26.99■■□□□ 1.91
MBD3-208ENST00000590830 TAF1CQ15572 869 aaPredicted RBP26.99■■□□□ 1.91
MBD3-208ENST00000590830 CRACR2BQ8N4Y2 399 aaPredicted RBP26.99■■□□□ 1.91
MBD3-208ENST00000590830 DCP1AQ9NPI6 582 aaPredicted RBP26.99■■□□□ 1.91
MBD3-208ENST00000590830 A0A0G2JLL6 359 aaPredicted RBP26.98■■□□□ 1.91
MBD3-208ENST00000590830 GLRX3O76003 335 aaKnown RBP26.98■■□□□ 1.91
MBD3-208ENST00000590830 ZSCAN25Q6NSZ9 544 aa26.98■■□□□ 1.91
MBD3-208ENST00000590830 PRRT2Q7Z6L0 340 aaPredicted RBP26.98■■□□□ 1.91
MBD3-208ENST00000590830 ANKRD23Q86SG2 305 aa26.98■■□□□ 1.91
MBD3-208ENST00000590830 ABHD8Q96I13 439 aa26.98■■□□□ 1.91
MBD3-208ENST00000590830 ZCCHC17Q9NP64 241 aaKnown RBP26.98■■□□□ 1.91
MBD3-208ENST00000590830 STAP2Q9UGK3 403 aa26.98■■□□□ 1.91
MBD3-208ENST00000590830 TRIM75PA6NK02 468 aa26.97■■□□□ 1.91
MBD3-208ENST00000590830 ERC2O15083 957 aa26.97■■□□□ 1.91
MBD3-208ENST00000590830 CAP1Q01518 475 aa26.97■■□□□ 1.91
MBD3-208ENST00000590830 B4GALNT3Q6L9W6 998 aa26.97■■□□□ 1.91
MBD3-208ENST00000590830 CTU1Q7Z7A3 348 aaKnown RBP26.97■■□□□ 1.91
MBD3-208ENST00000590830 EHD4Q9H223 541 aa26.97■■□□□ 1.91
MBD3-208ENST00000590830 ZFYVE28Q9HCC9 887 aa26.97■■□□□ 1.91
MBD3-208ENST00000590830 RNF113AO15541 343 aaKnown RBP26.96■■□□□ 1.91
MBD3-208ENST00000590830 CAPN15O75808 1086 aa26.96■■□□□ 1.91
MBD3-208ENST00000590830 CYP2D6P10635 497 aa26.96■■□□□ 1.91
MBD3-208ENST00000590830 TATDN1Q6P1N9 297 aa26.96■■□□□ 1.91
MBD3-208ENST00000590830 TTC6Q86TZ1 520 aa26.96■■□□□ 1.91
MBD3-208ENST00000590830 OSBP2Q969R2 916 aa26.96■■□□□ 1.91
MBD3-208ENST00000590830 LNPKQ9C0E8 428 aa26.96■■□□□ 1.91
MBD3-208ENST00000590830 MCM9Q9NXL9 1143 aa26.96■■□□□ 1.91
MBD3-208ENST00000590830 ZBTB47Q9UFB7 747 aaPredicted RBP26.96■■□□□ 1.91
MBD3-208ENST00000590830 SERPINB13Q9UIV8 391 aa26.96■■□□□ 1.91
MBD3-208ENST00000590830 DOCK1Q14185 1865 aa26.96■■□□□ 1.91
MBD3-208ENST00000590830 PDHXO00330 501 aa26.95■■□□□ 1.9
MBD3-208ENST00000590830 GDF11O95390 407 aa26.95■■□□□ 1.9
MBD3-208ENST00000590830 POLR3DP05423 398 aaPredicted RBP26.95■■□□□ 1.9
MBD3-208ENST00000590830 PDE1AP54750 535 aa26.95■■□□□ 1.9
MBD3-208ENST00000590830 SPP2Q13103 211 aa26.95■■□□□ 1.9
MBD3-208ENST00000590830 TRIM34Q9BYJ4 488 aa26.95■■□□□ 1.9
MBD3-208ENST00000590830 USP17L5A8MUK1 530 aa26.94■■□□□ 1.9
MBD3-208ENST00000590830 GABPAQ06546 454 aa26.94■■□□□ 1.9
MBD3-208ENST00000590830 ZNF280CQ8ND82 737 aa26.94■■□□□ 1.9
MBD3-208ENST00000590830 STRBPQ96SI9 672 aaKnown RBP26.94■■□□□ 1.9
MBD3-208ENST00000590830 PHIPQ8WWQ0 1821 aa26.94■■□□□ 1.9
MBD3-208ENST00000590830 MYH1P12882 1939 aa26.94■■□□□ 1.9
MBD3-208ENST00000590830 SMIM22K7EJ46 135 aa26.93■■□□□ 1.9
MBD3-208ENST00000590830 TLR2O60603 784 aa26.93■■□□□ 1.9
MBD3-208ENST00000590830 SHMT1P34896 483 aa26.93■■□□□ 1.9
MBD3-208ENST00000590830 FASTKD5Q7L8L6 764 aaKnown RBP26.93■■□□□ 1.9
MBD3-208ENST00000590830 ATP8A2Q9NTI2 1148 aa26.93■■□□□ 1.9
MBD3-208ENST00000590830 ASNSP08243 561 aa26.92■■□□□ 1.9
MBD3-208ENST00000590830 SP3Q02447 781 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms