RNA–Protein interactions for RNA: ENST00000590342.1

DUSP3-202, Transcript of dual specificity phosphatase 3, humanhuman

TSL 1 (best)

Gene DUSP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP3-202ENST00000590342 DDX60LQ5H9U9 1706 aaKnown RBP16.49■□□□□ 0.23
DUSP3-202ENST00000590342 GLTPD2A6NH11 291 aa16.49■□□□□ 0.23
DUSP3-202ENST00000590342 TCP10L2B9ZVM9 353 aa16.49■□□□□ 0.23
DUSP3-202ENST00000590342 NPM3O75607 178 aaKnown RBP16.49■□□□□ 0.23
DUSP3-202ENST00000590342 PLCD1P51178 756 aa16.49■□□□□ 0.23
DUSP3-202ENST00000590342 TRDNQ13061 729 aa16.49■□□□□ 0.23
DUSP3-202ENST00000590342 COL9A3Q14050 684 aaPredicted RBP16.49■□□□□ 0.23
DUSP3-202ENST00000590342 BLOC1S2Q6QNY1 142 aa16.49■□□□□ 0.23
DUSP3-202ENST00000590342 MFSD6Q6ZSS7 791 aa16.49■□□□□ 0.23
DUSP3-202ENST00000590342 ZFPM1Q8IX07 1006 aa16.49■□□□□ 0.23
DUSP3-202ENST00000590342 STAG1Q8WVM7 1258 aa16.49■□□□□ 0.23
DUSP3-202ENST00000590342 CYP46A1Q9Y6A2 500 aa16.49■□□□□ 0.23
DUSP3-202ENST00000590342 TACC3Q9Y6A5 838 aa16.49■□□□□ 0.23
DUSP3-202ENST00000590342 LAMB1P07942 1786 aa16.49■□□□□ 0.23
DUSP3-202ENST00000590342 SLC3A2P08195 630 aaKnown RBP16.48■□□□□ 0.23
DUSP3-202ENST00000590342 RUFY3Q7L099 469 aa16.48■□□□□ 0.23
DUSP3-202ENST00000590342 RALYLQ86SE5 291 aaKnown RBP16.48■□□□□ 0.23
DUSP3-202ENST00000590342 NCOA7Q8NI08 942 aa16.48■□□□□ 0.23
DUSP3-202ENST00000590342 TRPM4Q8TD43 1214 aa16.48■□□□□ 0.23
DUSP3-202ENST00000590342 RNF41Q9H4P4 317 aaPredicted RBP16.48■□□□□ 0.23
DUSP3-202ENST00000590342 ENTPD3O75355 529 aa16.47■□□□□ 0.23
DUSP3-202ENST00000590342 BAG4O95429 457 aaKnown RBP16.47■□□□□ 0.23
DUSP3-202ENST00000590342 CUL4AQ13619 759 aa16.47■□□□□ 0.23
DUSP3-202ENST00000590342 TTC6Q86TZ1 520 aa16.47■□□□□ 0.23
DUSP3-202ENST00000590342 INTS4Q96HW7 963 aaKnown RBP16.47■□□□□ 0.23
DUSP3-202ENST00000590342 L3MBTL3Q96JM7 780 aaPredicted RBP16.47■□□□□ 0.23
DUSP3-202ENST00000590342 GZF1Q9H116 711 aaPredicted RBP16.47■□□□□ 0.23
DUSP3-202ENST00000590342 TOMM22Q9NS69 142 aa16.47■□□□□ 0.23
DUSP3-202ENST00000590342 NEDD4P46934 1319 aa16.47■□□□□ 0.23
DUSP3-202ENST00000590342 HMGB1P09429 215 aaKnown RBP16.47■□□□□ 0.23
DUSP3-202ENST00000590342 FKBP1CQ5VVH2 108 aa16.47■□□□□ 0.23
DUSP3-202ENST00000590342 ZSCAN29Q8IWY8 852 aaPredicted RBP16.47■□□□□ 0.23
DUSP3-202ENST00000590342 DYNLL2Q96FJ2 89 aa16.47■□□□□ 0.23
DUSP3-202ENST00000590342 CNNM2Q9H8M5 875 aa16.47■□□□□ 0.23
DUSP3-202ENST00000590342 B4E1Z4 1266 aa16.46■□□□□ 0.23
DUSP3-202ENST00000590342 RPS6KB1P23443 525 aa16.46■□□□□ 0.23
DUSP3-202ENST00000590342 RRP12Q5JTH9 1297 aaKnown RBP16.46■□□□□ 0.23
DUSP3-202ENST00000590342 TCEANC2Q96MN5 208 aa16.46■□□□□ 0.23
DUSP3-202ENST00000590342 DHX36Q9H2U1 1008 aaKnown RBP16.46■□□□□ 0.23
DUSP3-202ENST00000590342 ADARB2Q9NS39 739 aaKnown RBP16.46■□□□□ 0.23
DUSP3-202ENST00000590342 ASTN2O75129 1339 aaPredicted RBP16.46■□□□□ 0.23
DUSP3-202ENST00000590342 GOLGA6L3A6NEY3 463 aa16.46■□□□□ 0.22
DUSP3-202ENST00000590342 DDTLA6NHG4 134 aaPredicted RBP16.46■□□□□ 0.22
DUSP3-202ENST00000590342 PRDM1O75626 825 aa16.46■□□□□ 0.22
DUSP3-202ENST00000590342 PDE4BQ07343 736 aa16.46■□□□□ 0.22
DUSP3-202ENST00000590342 KRT23Q9C075 422 aa16.46■□□□□ 0.22
DUSP3-202ENST00000590342 HACL1Q9UJ83 578 aa16.46■□□□□ 0.22
DUSP3-202ENST00000590342 ROBO3Q96MS0 1386 aa16.46■□□□□ 0.22
DUSP3-202ENST00000590342 CNTNAP1P78357 1384 aa16.45■□□□□ 0.22
DUSP3-202ENST00000590342 HLA-DOAP06340 250 aa16.45■□□□□ 0.22
DUSP3-202ENST00000590342 PCP11498 1178 aaKnown RBP16.45■□□□□ 0.22
DUSP3-202ENST00000590342 HIRAP54198 1017 aaPredicted RBP16.45■□□□□ 0.22
DUSP3-202ENST00000590342 DHX32Q7L7V1 743 aaKnown RBP16.45■□□□□ 0.22
DUSP3-202ENST00000590342 SH3BP5LQ7L8J4 393 aa16.45■□□□□ 0.22
DUSP3-202ENST00000590342 MB21D2Q8IYB1 491 aaPredicted RBP16.45■□□□□ 0.22
DUSP3-202ENST00000590342 FAM151AQ8WW52 585 aa16.45■□□□□ 0.22
DUSP3-202ENST00000590342 PDRG1Q9NUG6 133 aa16.45■□□□□ 0.22
DUSP3-202ENST00000590342 FGRP09769 529 aa16.44■□□□□ 0.22
DUSP3-202ENST00000590342 CHST3Q7LGC8 479 aa16.44■□□□□ 0.22
DUSP3-202ENST00000590342 FAM83AQ86UY5 434 aa16.44■□□□□ 0.22
DUSP3-202ENST00000590342 NKX2-3Q8TAU0 364 aa16.44■□□□□ 0.22
DUSP3-202ENST00000590342 TTC14Q96N46 770 aa16.44■□□□□ 0.22
DUSP3-202ENST00000590342 SCAF8Q9UPN6 1271 aaKnown RBP16.44■□□□□ 0.22
DUSP3-202ENST00000590342 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.44■□□□□ 0.22
DUSP3-202ENST00000590342 KDM4AO75164 1064 aa16.44■□□□□ 0.22
DUSP3-202ENST00000590342 MCM5P33992 734 aa16.44■□□□□ 0.22
DUSP3-202ENST00000590342 TNNI2P48788 182 aa16.44■□□□□ 0.22
DUSP3-202ENST00000590342 TNFAIP1Q13829 316 aa16.44■□□□□ 0.22
DUSP3-202ENST00000590342 C16orf86Q6ZW13 317 aa16.44■□□□□ 0.22
DUSP3-202ENST00000590342 SLC44A5Q8NCS7 719 aa16.44■□□□□ 0.22
DUSP3-202ENST00000590342 MKNK2Q9HBH9 465 aa16.44■□□□□ 0.22
DUSP3-202ENST00000590342 PI4KBQ9UBF8 816 aa16.44■□□□□ 0.22
DUSP3-202ENST00000590342 SERPINB13Q9UIV8 391 aa16.44■□□□□ 0.22
DUSP3-202ENST00000590342 ATRNL1Q5VV63 1379 aa16.43■□□□□ 0.22
DUSP3-202ENST00000590342 ORC4O43929 436 aa16.43■□□□□ 0.22
DUSP3-202ENST00000590342 EXOSC10Q01780 885 aaKnown RBP16.43■□□□□ 0.22
DUSP3-202ENST00000590342 ANGEL2Q5VTE6 544 aaKnown RBP16.43■□□□□ 0.22
DUSP3-202ENST00000590342 NOL8Q76FK4 1167 aaKnown RBP16.43■□□□□ 0.22
DUSP3-202ENST00000590342 CYB5R4Q7L1T6 521 aa16.43■□□□□ 0.22
DUSP3-202ENST00000590342 ESR2Q92731 530 aa16.43■□□□□ 0.22
DUSP3-202ENST00000590342 CSRNP1Q96S65 589 aa16.43■□□□□ 0.22
DUSP3-202ENST00000590342 LRRC2Q9BYS8 371 aa16.43■□□□□ 0.22
DUSP3-202ENST00000590342 TMEM39BQ9GZU3 492 aa16.43■□□□□ 0.22
DUSP3-202ENST00000590342 ZNF287Q9HBT7 754 aa16.43■□□□□ 0.22
DUSP3-202ENST00000590342 ZSWIM5Q9P217 1185 aa16.43■□□□□ 0.22
DUSP3-202ENST00000590342 ISY1Q9ULR0 285 aaKnown RBP16.43■□□□□ 0.22
DUSP3-202ENST00000590342 COL2A1P02458 1487 aaPredicted RBP16.43■□□□□ 0.22
DUSP3-202ENST00000590342 FSD2A1L4K1 749 aa16.42■□□□□ 0.22
DUSP3-202ENST00000590342 PRC1O43663 620 aa16.42■□□□□ 0.22
DUSP3-202ENST00000590342 RANBP6O60518 1105 aaKnown RBP16.42■□□□□ 0.22
DUSP3-202ENST00000590342 CDK8P49336 464 aa16.42■□□□□ 0.22
DUSP3-202ENST00000590342 AK2P54819 239 aa16.42■□□□□ 0.22
DUSP3-202ENST00000590342 PKP1Q13835 747 aa16.42■□□□□ 0.22
DUSP3-202ENST00000590342 RASA3Q14644 834 aa16.42■□□□□ 0.22
DUSP3-202ENST00000590342 EHD4Q9H223 541 aa16.42■□□□□ 0.22
DUSP3-202ENST00000590342 GGA3Q9NZ52 723 aa16.42■□□□□ 0.22
DUSP3-202ENST00000590342 EPHX2P34913 555 aa16.42■□□□□ 0.22
DUSP3-202ENST00000590342 ANTXR2P58335 489 aa16.42■□□□□ 0.22
DUSP3-202ENST00000590342 GABPAQ06546 454 aa16.42■□□□□ 0.22
DUSP3-202ENST00000590342 CRACR2BQ8N4Y2 399 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms