RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 PDHXO00330 501 aa16.74■□□□□ 0.27
NEDD4L-228ENST00000590248 CTNND1O60716 968 aaKnown RBP16.74■□□□□ 0.27
NEDD4L-228ENST00000590248 DNAJC2Q99543 621 aaKnown RBP16.74■□□□□ 0.27
NEDD4L-228ENST00000590248 PALD1Q9ULE6 856 aa16.74■□□□□ 0.27
NEDD4L-228ENST00000590248 AFG3L2Q9Y4W6 797 aa16.74■□□□□ 0.27
NEDD4L-228ENST00000590248 FLT1P17948 1338 aa16.73■□□□□ 0.27
NEDD4L-228ENST00000590248 GOLIM4O00461 696 aa16.73■□□□□ 0.27
NEDD4L-228ENST00000590248 TLR2O60603 784 aa16.73■□□□□ 0.27
NEDD4L-228ENST00000590248 PLCG2P16885 1265 aa16.73■□□□□ 0.27
NEDD4L-228ENST00000590248 MAP3K12Q12852 859 aa16.73■□□□□ 0.27
NEDD4L-228ENST00000590248 GPAT2Q6NUI2 795 aa16.73■□□□□ 0.27
NEDD4L-228ENST00000590248 BOLA2Q9H3K6 86 aa16.73■□□□□ 0.27
NEDD4L-228ENST00000590248 EFCC1Q9HA90 598 aa16.73■□□□□ 0.27
NEDD4L-228ENST00000590248 PI4KBQ9UBF8 816 aa16.73■□□□□ 0.27
NEDD4L-228ENST00000590248 CPA4Q9UI42 421 aa16.73■□□□□ 0.27
NEDD4L-228ENST00000590248 TRIM75PA6NK02 468 aa16.72■□□□□ 0.27
NEDD4L-228ENST00000590248 CXCL11O14625 94 aa16.72■□□□□ 0.27
NEDD4L-228ENST00000590248 RGS19P49795 217 aa16.72■□□□□ 0.27
NEDD4L-228ENST00000590248 SLFNL1Q499Z3 407 aa16.72■□□□□ 0.27
NEDD4L-228ENST00000590248 ANKRD23Q86SG2 305 aa16.72■□□□□ 0.27
NEDD4L-228ENST00000590248 ARHGAP39Q9C0H5 1083 aa16.72■□□□□ 0.27
NEDD4L-228ENST00000590248 MYH7P12883 1935 aa16.72■□□□□ 0.27
NEDD4L-228ENST00000590248 CENPFP49454 3210 aa16.71■□□□□ 0.27
NEDD4L-228ENST00000590248 CYP2C8P10632 490 aa16.71■□□□□ 0.27
NEDD4L-228ENST00000590248 USP5P45974 858 aa16.71■□□□□ 0.27
NEDD4L-228ENST00000590248 JAG1P78504 1218 aa16.71■□□□□ 0.27
NEDD4L-228ENST00000590248 SHROOM1Q2M3G4 852 aaPredicted RBP16.71■□□□□ 0.27
NEDD4L-228ENST00000590248 GADL1Q6ZQY3 521 aa16.71■□□□□ 0.27
NEDD4L-228ENST00000590248 LRRCC1Q9C099 1032 aa16.71■□□□□ 0.27
NEDD4L-228ENST00000590248 DHX36Q9H2U1 1008 aaKnown RBP16.71■□□□□ 0.27
NEDD4L-228ENST00000590248 DNAJC18Q9H819 358 aa16.71■□□□□ 0.27
NEDD4L-228ENST00000590248 ZCCHC17Q9NP64 241 aaKnown RBP16.71■□□□□ 0.27
NEDD4L-228ENST00000590248 PTPN22Q9Y2R2 807 aa16.71■□□□□ 0.27
NEDD4L-228ENST00000590248 COL2A1P02458 1487 aaPredicted RBP16.71■□□□□ 0.27
NEDD4L-228ENST00000590248 MGAMO43451 1857 aa16.71■□□□□ 0.27
NEDD4L-228ENST00000590248 A0A0G2JLL6 359 aaPredicted RBP16.7■□□□□ 0.26
NEDD4L-228ENST00000590248 CAP2P40123 477 aa16.7■□□□□ 0.26
NEDD4L-228ENST00000590248 SPP2Q13103 211 aa16.7■□□□□ 0.26
NEDD4L-228ENST00000590248 SLC9C2Q5TAH2 1124 aa16.7■□□□□ 0.26
NEDD4L-228ENST00000590248 C17orf99Q6UX52 265 aa16.7■□□□□ 0.26
NEDD4L-228ENST00000590248 PRRT2Q7Z6L0 340 aaPredicted RBP16.7■□□□□ 0.26
NEDD4L-228ENST00000590248 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.7■□□□□ 0.26
NEDD4L-228ENST00000590248 PCDHB15Q9Y5E8 787 aa16.7■□□□□ 0.26
NEDD4L-228ENST00000590248 DOCK3Q8IZD9 2030 aa16.7■□□□□ 0.26
NEDD4L-228ENST00000590248 IGSF3O75054 1194 aa16.69■□□□□ 0.26
NEDD4L-228ENST00000590248 CHGBP05060 677 aa16.69■□□□□ 0.26
NEDD4L-228ENST00000590248 PDE6AP16499 860 aa16.69■□□□□ 0.26
NEDD4L-228ENST00000590248 CTGFP29279 349 aa16.69■□□□□ 0.26
NEDD4L-228ENST00000590248 RRP1P56182 461 aaKnown RBP16.69■□□□□ 0.26
NEDD4L-228ENST00000590248 MLLT1Q03111 559 aaPredicted RBP16.69■□□□□ 0.26
NEDD4L-228ENST00000590248 TTF1Q15361 905 aaPredicted RBP16.69■□□□□ 0.26
NEDD4L-228ENST00000590248 FOXP4Q8IVH2 680 aaPredicted RBP16.69■□□□□ 0.26
NEDD4L-228ENST00000590248 CRACR2BQ8N4Y2 399 aaPredicted RBP16.69■□□□□ 0.26
NEDD4L-228ENST00000590248 RIOK1Q9BRS2 568 aaKnown RBP16.69■□□□□ 0.26
NEDD4L-228ENST00000590248 HERC5Q9UII4 1024 aaKnown RBP16.69■□□□□ 0.26
NEDD4L-228ENST00000590248 ZNF532Q9HCE3 1301 aa16.69■□□□□ 0.26
NEDD4L-228ENST00000590248 BAZ2AQ9UIF9 1905 aaKnown RBP16.68■□□□□ 0.26
NEDD4L-228ENST00000590248 NAV1Q8NEY1 1877 aa16.68■□□□□ 0.26
NEDD4L-228ENST00000590248 GDF11O95390 407 aa16.68■□□□□ 0.26
NEDD4L-228ENST00000590248 ATP5JP18859 108 aa16.68■□□□□ 0.26
NEDD4L-228ENST00000590248 LACTBP83111 547 aaPredicted RBP16.68■□□□□ 0.26
NEDD4L-228ENST00000590248 FASTKD5Q7L8L6 764 aaKnown RBP16.68■□□□□ 0.26
NEDD4L-228ENST00000590248 DCTPP1Q9H773 170 aa16.68■□□□□ 0.26
NEDD4L-228ENST00000590248 PAG1Q9NWQ8 432 aa16.68■□□□□ 0.26
NEDD4L-228ENST00000590248 HTTP42858 3142 aa16.68■□□□□ 0.26
NEDD4L-228ENST00000590248 MAGEB6P1A0A0J9YX57 407 aa16.67■□□□□ 0.26
NEDD4L-228ENST00000590248 TCRBV5S4A2TA0A5A2 114 aa16.67■□□□□ 0.26
NEDD4L-228ENST00000590248 EVX2Q03828 476 aa16.67■□□□□ 0.26
NEDD4L-228ENST00000590248 TREML2Q5T2D2 321 aa16.67■□□□□ 0.26
NEDD4L-228ENST00000590248 METTL16Q86W50 562 aaKnown RBP16.67■□□□□ 0.26
NEDD4L-228ENST00000590248 ZNF280CQ8ND82 737 aa16.67■□□□□ 0.26
NEDD4L-228ENST00000590248 TRIM34Q9BYJ4 488 aa16.67■□□□□ 0.26
NEDD4L-228ENST00000590248 ADGRA2Q96PE1 1338 aa16.67■□□□□ 0.26
NEDD4L-228ENST00000590248 USP17L5A8MUK1 530 aa16.66■□□□□ 0.26
NEDD4L-228ENST00000590248 TSHZ3Q63HK5 1081 aa16.66■□□□□ 0.26
NEDD4L-228ENST00000590248 CRBNQ96SW2 442 aa16.66■□□□□ 0.26
NEDD4L-228ENST00000590248 PARK7Q99497 189 aaKnown RBP16.66■□□□□ 0.26
NEDD4L-228ENST00000590248 HAUS7Q99871 368 aa16.66■□□□□ 0.26
NEDD4L-228ENST00000590248 PTCH2Q9Y6C5 1203 aa16.66■□□□□ 0.26
NEDD4L-228ENST00000590248 KIAA0100Q14667 2235 aaKnown RBP16.65■□□□□ 0.26
NEDD4L-228ENST00000590248 LOC285556D6RIA3 1793 aa16.65■□□□□ 0.26
NEDD4L-228ENST00000590248 HLA-DOAP06340 250 aa16.65■□□□□ 0.26
NEDD4L-228ENST00000590248 PSMC4P43686 418 aa16.65■□□□□ 0.26
NEDD4L-228ENST00000590248 PLCD1P51178 756 aa16.65■□□□□ 0.26
NEDD4L-228ENST00000590248 HMGCS2P54868 508 aa16.65■□□□□ 0.26
NEDD4L-228ENST00000590248 KIF22Q14807 665 aa16.65■□□□□ 0.26
NEDD4L-228ENST00000590248 LCORLQ8N3X6 602 aa16.65■□□□□ 0.26
NEDD4L-228ENST00000590248 SDR42E1Q8WUS8 393 aa16.65■□□□□ 0.26
NEDD4L-228ENST00000590248 MYH8P13535 1937 aa16.64■□□□□ 0.26
NEDD4L-228ENST00000590248 MYCP01106 439 aaPredicted RBP16.64■□□□□ 0.25
NEDD4L-228ENST00000590248 BCRP11274 1271 aa16.64■□□□□ 0.25
NEDD4L-228ENST00000590248 ADD2P35612 726 aa16.64■□□□□ 0.25
NEDD4L-228ENST00000590248 ARHGEF6Q15052 776 aa16.64■□□□□ 0.25
NEDD4L-228ENST00000590248 TRIM47Q96LD4 638 aa16.64■□□□□ 0.25
NEDD4L-228ENST00000590248 ARMT1Q9H993 441 aa16.64■□□□□ 0.25
NEDD4L-228ENST00000590248 AGTPBP1Q9UPW5 1226 aa16.64■□□□□ 0.25
NEDD4L-228ENST00000590248 DDX60LQ5H9U9 1706 aaKnown RBP16.63■□□□□ 0.25
NEDD4L-228ENST00000590248 PRKAB2O43741 272 aa16.63■□□□□ 0.25
NEDD4L-228ENST00000590248 FMNL1O95466 1100 aaPredicted RBP16.63■□□□□ 0.25
NEDD4L-228ENST00000590248 POLR3DP05423 398 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms