RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 SHISA4Q96DD7 197 aa20■□□□□ 0.79
MBD3-206ENST00000589901 AATFQ9NY61 560 aaKnown RBP eCLIP20■□□□□ 0.79
MBD3-206ENST00000589901 AGTPBP1Q9UPW5 1226 aa20■□□□□ 0.79
MBD3-206ENST00000589901 COL2A1P02458 1487 aaPredicted RBP19.99■□□□□ 0.79
MBD3-206ENST00000589901 CYP2E1P05181 493 aaPredicted RBP19.99■□□□□ 0.79
MBD3-206ENST00000589901 SPP2Q13103 211 aa19.99■□□□□ 0.79
MBD3-206ENST00000589901 HABP4Q5JVS0 413 aaKnown RBP19.99■□□□□ 0.79
MBD3-206ENST00000589901 DIEXFQ68CQ4 756 aaKnown RBP19.99■□□□□ 0.79
MBD3-206ENST00000589901 ADGRA1Q86SQ6 560 aa19.99■□□□□ 0.79
MBD3-206ENST00000589901 ITPRIPQ8IWB1 547 aa19.99■□□□□ 0.79
MBD3-206ENST00000589901 FTSJ3Q8IY81 847 aaKnown RBP19.99■□□□□ 0.79
MBD3-206ENST00000589901 BIN2Q9UBW5 565 aaPredicted RBP19.99■□□□□ 0.79
MBD3-206ENST00000589901 DOCK1Q14185 1865 aa19.99■□□□□ 0.79
MBD3-206ENST00000589901 ZBTB7BO15156 539 aaPredicted RBP19.98■□□□□ 0.79
MBD3-206ENST00000589901 CCL5P13501 91 aa19.98■□□□□ 0.79
MBD3-206ENST00000589901 CAP2P40123 477 aa19.98■□□□□ 0.79
MBD3-206ENST00000589901 NOL10Q9BSC4 688 aaKnown RBP19.98■□□□□ 0.79
MBD3-206ENST00000589901 TLR7Q9NYK1 1049 aaKnown RBP19.98■□□□□ 0.79
MBD3-206ENST00000589901 BAG3O95817 575 aa19.97■□□□□ 0.79
MBD3-206ENST00000589901 ZAP70P43403 619 aa19.97■□□□□ 0.79
MBD3-206ENST00000589901 ANKRD13CQ8N6S4 541 aa19.97■□□□□ 0.79
MBD3-206ENST00000589901 ZNF280CQ8ND82 737 aa19.97■□□□□ 0.79
MBD3-206ENST00000589901 PCDH10Q9P2E7 1040 aa19.97■□□□□ 0.79
MBD3-206ENST00000589901 DBNLQ9UJU6 430 aaKnown RBP19.97■□□□□ 0.79
MBD3-206ENST00000589901 FLT3LGP49771 235 aa19.96■□□□□ 0.79
MBD3-206ENST00000589901 HMGCS2P54868 508 aa19.96■□□□□ 0.79
MBD3-206ENST00000589901 PPP4CP60510 307 aa19.96■□□□□ 0.79
MBD3-206ENST00000589901 MAPKAPK5Q8IW41 473 aa19.96■□□□□ 0.79
MBD3-206ENST00000589901 PROCA1Q8NCQ7 364 aaPredicted RBP19.96■□□□□ 0.79
MBD3-206ENST00000589901 TGFBRAP1Q8WUH2 860 aa19.96■□□□□ 0.79
MBD3-206ENST00000589901 ZNF512BQ96KM6 892 aaPredicted RBP19.96■□□□□ 0.79
MBD3-206ENST00000589901 CCDC8Q9H0W5 538 aaPredicted RBP19.96■□□□□ 0.79
MBD3-206ENST00000589901 RNF208Q9H0X6 261 aa19.96■□□□□ 0.79
MBD3-206ENST00000589901 PIH1D3Q9NQM4 214 aaKnown RBP19.96■□□□□ 0.79
MBD3-206ENST00000589901 PI4KBQ9UBF8 816 aa19.96■□□□□ 0.79
MBD3-206ENST00000589901 HERC5Q9UII4 1024 aaKnown RBP19.96■□□□□ 0.79
MBD3-206ENST00000589901 NOP58Q9Y2X3 529 aaKnown RBP19.96■□□□□ 0.79
MBD3-206ENST00000589901 PHIPQ8WWQ0 1821 aa19.96■□□□□ 0.79
MBD3-206ENST00000589901 TNPO2O14787 897 aaKnown RBP19.95■□□□□ 0.78
MBD3-206ENST00000589901 GJB1P08034 283 aa19.95■□□□□ 0.78
MBD3-206ENST00000589901 UBXN2AP68543 259 aa19.95■□□□□ 0.78
MBD3-206ENST00000589901 SLAIN1Q8ND83 568 aa19.95■□□□□ 0.78
MBD3-206ENST00000589901 DHX36Q9H2U1 1008 aaKnown RBP19.95■□□□□ 0.78
MBD3-206ENST00000589901 USP17L5A8MUK1 530 aa19.94■□□□□ 0.78
MBD3-206ENST00000589901 ADCY3O60266 1144 aa19.94■□□□□ 0.78
MBD3-206ENST00000589901 ELNP15502 786 aa19.94■□□□□ 0.78
MBD3-206ENST00000589901 PLCG2P16885 1265 aa19.94■□□□□ 0.78
MBD3-206ENST00000589901 GJA8P48165 433 aa19.94■□□□□ 0.78
MBD3-206ENST00000589901 JAG1P78504 1218 aa19.94■□□□□ 0.78
MBD3-206ENST00000589901 NKX2-3Q8TAU0 364 aa19.94■□□□□ 0.78
MBD3-206ENST00000589901 EAF2Q96CJ1 260 aaPredicted RBP19.94■□□□□ 0.78
MBD3-206ENST00000589901 UNC93B1Q9H1C4 597 aa19.94■□□□□ 0.78
MBD3-206ENST00000589901 DNAJC18Q9H819 358 aa19.94■□□□□ 0.78
MBD3-206ENST00000589901 PNMA3Q9UL41 463 aa19.94■□□□□ 0.78
MBD3-206ENST00000589901 FLT1P17948 1338 aa19.94■□□□□ 0.78
MBD3-206ENST00000589901 PTPRFP10586 1907 aa19.94■□□□□ 0.78
MBD3-206ENST00000589901 H0YGN5 161 aa19.93■□□□□ 0.78
MBD3-206ENST00000589901 DYNLL1P63167 89 aaKnown RBP19.93■□□□□ 0.78
MBD3-206ENST00000589901 SHROOM1Q2M3G4 852 aaPredicted RBP19.93■□□□□ 0.78
MBD3-206ENST00000589901 TBC1D2Q9BYX2 928 aa19.93■□□□□ 0.78
MBD3-206ENST00000589901 PALD1Q9ULE6 856 aa19.93■□□□□ 0.78
MBD3-206ENST00000589901 FAM110CQ1W6H9 321 aa19.92■□□□□ 0.78
MBD3-206ENST00000589901 SH3D19Q5HYK7 790 aa19.92■□□□□ 0.78
MBD3-206ENST00000589901 CEP85Q6P2H3 762 aa19.92■□□□□ 0.78
MBD3-206ENST00000589901 ASCC2Q9H1I8 757 aaPredicted RBP19.92■□□□□ 0.78
MBD3-206ENST00000589901 SAP30BPQ9UHR5 308 aaKnown RBP19.92■□□□□ 0.78
MBD3-206ENST00000589901 NDUFB9Q9Y6M9 179 aa19.92■□□□□ 0.78
MBD3-206ENST00000589901 INHAP05111 366 aa19.91■□□□□ 0.78
MBD3-206ENST00000589901 CYP7A1P22680 504 aa19.91■□□□□ 0.78
MBD3-206ENST00000589901 IRF5Q13568 498 aa19.91■□□□□ 0.78
MBD3-206ENST00000589901 MTMR2Q13614 643 aa19.91■□□□□ 0.78
MBD3-206ENST00000589901 UBE2Q1Q7Z7E8 422 aa19.91■□□□□ 0.78
MBD3-206ENST00000589901 METTL16Q86W50 562 aaKnown RBP19.91■□□□□ 0.78
MBD3-206ENST00000589901 PANK1Q8TE04 598 aa19.91■□□□□ 0.78
MBD3-206ENST00000589901 PXYLP1Q8TE99 480 aa19.91■□□□□ 0.78
MBD3-206ENST00000589901 U2AF1L4Q8WU68 220 aaKnown RBP19.91■□□□□ 0.78
MBD3-206ENST00000589901 COA7Q96BR5 231 aa19.91■□□□□ 0.78
MBD3-206ENST00000589901 WDR18Q9BV38 432 aa19.91■□□□□ 0.78
MBD3-206ENST00000589901 AS3MTQ9HBK9 375 aa19.91■□□□□ 0.78
MBD3-206ENST00000589901 TAOK2Q9UL54 1235 aa19.91■□□□□ 0.78
MBD3-206ENST00000589901 COLQQ9Y215 455 aaPredicted RBP19.91■□□□□ 0.78
MBD3-206ENST00000589901 CEP290O15078 2479 aa19.9■□□□□ 0.78
MBD3-206ENST00000589901 IDH1O75874 414 aaKnown RBP19.9■□□□□ 0.78
MBD3-206ENST00000589901 GDF11O95390 407 aa19.9■□□□□ 0.78
MBD3-206ENST00000589901 GCLCP48506 637 aaPredicted RBP19.9■□□□□ 0.78
MBD3-206ENST00000589901 PABPC4Q13310 644 aaKnown RBP eCLIP19.9■□□□□ 0.78
MBD3-206ENST00000589901 FOXP4Q8IVH2 680 aaPredicted RBP19.9■□□□□ 0.78
MBD3-206ENST00000589901 CRACR2BQ8N4Y2 399 aaPredicted RBP19.9■□□□□ 0.78
MBD3-206ENST00000589901 MIGA1Q8NAN2 632 aa19.9■□□□□ 0.78
MBD3-206ENST00000589901 EXOC6BQ9Y2D4 811 aa19.9■□□□□ 0.78
MBD3-206ENST00000589901 MAST2Q6P0Q8 1798 aa19.9■□□□□ 0.78
MBD3-206ENST00000589901 SIPA1L1O43166 1804 aa19.89■□□□□ 0.77
MBD3-206ENST00000589901 MGAMO43451 1857 aa19.89■□□□□ 0.77
MBD3-206ENST00000589901 ASNSP08243 561 aa19.89■□□□□ 0.77
MBD3-206ENST00000589901 BACE1P56817 501 aa19.89■□□□□ 0.77
MBD3-206ENST00000589901 DPF3Q92784 378 aa19.89■□□□□ 0.77
MBD3-206ENST00000589901 TRIM34Q9BYJ4 488 aa19.89■□□□□ 0.77
MBD3-206ENST00000589901 ANTXR1Q9H6X2 564 aa19.89■□□□□ 0.77
MBD3-206ENST00000589901 IGSF3O75054 1194 aa19.88■□□□□ 0.77
MBD3-206ENST00000589901 SGPL1O95470 568 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms