RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 SCYL3Q8IZE3 742 aa12.9□□□□□ -0.34
CLPTM1-211ENST00000589347 ZNF384Q8TF68 577 aa12.9□□□□□ -0.34
CLPTM1-211ENST00000589347 CNKSR2Q8WXI2 1034 aa12.9□□□□□ -0.34
CLPTM1-211ENST00000589347 TRIM34Q9BYJ4 488 aa12.9□□□□□ -0.34
CLPTM1-211ENST00000589347 OSBPL5Q9H0X9 879 aaPredicted RBP12.9□□□□□ -0.34
CLPTM1-211ENST00000589347 ZFYVE28Q9HCC9 887 aa12.9□□□□□ -0.34
CLPTM1-211ENST00000589347 IL1RAPL2Q9NP60 686 aa12.9□□□□□ -0.34
CLPTM1-211ENST00000589347 DDX4Q9NQI0 724 aaKnown RBP12.9□□□□□ -0.34
CLPTM1-211ENST00000589347 AATFQ9NY61 560 aaKnown RBP eCLIP12.9□□□□□ -0.34
CLPTM1-211ENST00000589347 BAZ2AQ9UIF9 1905 aaKnown RBP12.9□□□□□ -0.35
CLPTM1-211ENST00000589347 ARHGEF6Q15052 776 aa12.89□□□□□ -0.35
CLPTM1-211ENST00000589347 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.89□□□□□ -0.35
CLPTM1-211ENST00000589347 BRI3BPQ8WY22 251 aa12.89□□□□□ -0.35
CLPTM1-211ENST00000589347 MS4A4AQ96JQ5 239 aa12.89□□□□□ -0.35
CLPTM1-211ENST00000589347 DDTLA6NHG4 134 aaPredicted RBP12.88□□□□□ -0.35
CLPTM1-211ENST00000589347 IRF6O14896 467 aa12.88□□□□□ -0.35
CLPTM1-211ENST00000589347 TBC1D12O60347 775 aa12.88□□□□□ -0.35
CLPTM1-211ENST00000589347 HLA-DOAP06340 250 aa12.88□□□□□ -0.35
CLPTM1-211ENST00000589347 CYP7A1P22680 504 aa12.88□□□□□ -0.35
CLPTM1-211ENST00000589347 SP3Q02447 781 aa12.88□□□□□ -0.35
CLPTM1-211ENST00000589347 SLC9C1Q4G0N8 1177 aa12.88□□□□□ -0.35
CLPTM1-211ENST00000589347 C20orf194Q5TEA3 1177 aa12.88□□□□□ -0.35
CLPTM1-211ENST00000589347 ZFPM1Q8IX07 1006 aa12.88□□□□□ -0.35
CLPTM1-211ENST00000589347 SH3RF3Q8TEJ3 882 aaPredicted RBP12.88□□□□□ -0.35
CLPTM1-211ENST00000589347 TBC1D2Q9BYX2 928 aa12.88□□□□□ -0.35
CLPTM1-211ENST00000589347 DHX36Q9H2U1 1008 aaKnown RBP12.88□□□□□ -0.35
CLPTM1-211ENST00000589347 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.88□□□□□ -0.35
CLPTM1-211ENST00000589347 PIH1D3Q9NQM4 214 aaKnown RBP12.88□□□□□ -0.35
CLPTM1-211ENST00000589347 HERC5Q9UII4 1024 aaKnown RBP12.88□□□□□ -0.35
CLPTM1-211ENST00000589347 ZSWIM8A7E2V4 1837 aa12.88□□□□□ -0.35
CLPTM1-211ENST00000589347 CTNND1O60716 968 aaKnown RBP12.87□□□□□ -0.35
CLPTM1-211ENST00000589347 MNX1P50219 401 aaPredicted RBP12.87□□□□□ -0.35
CLPTM1-211ENST00000589347 PPP4CP60510 307 aa12.87□□□□□ -0.35
CLPTM1-211ENST00000589347 SH3BP5LQ7L8J4 393 aa12.87□□□□□ -0.35
CLPTM1-211ENST00000589347 MAGEB6Q8N7X4 407 aa12.87□□□□□ -0.35
CLPTM1-211ENST00000589347 GPATCH3Q96I76 525 aa12.87□□□□□ -0.35
CLPTM1-211ENST00000589347 YTHDC1Q96MU7 727 aaKnown RBP12.87□□□□□ -0.35
CLPTM1-211ENST00000589347 LRRCC1Q9C099 1032 aa12.87□□□□□ -0.35
CLPTM1-211ENST00000589347 KCNH4Q9UQ05 1017 aa12.87□□□□□ -0.35
CLPTM1-211ENST00000589347 PTCH2Q9Y6C5 1203 aa12.87□□□□□ -0.35
CLPTM1-211ENST00000589347 FLT1P17948 1338 aa12.87□□□□□ -0.35
CLPTM1-211ENST00000589347 USP5P45974 858 aa12.86□□□□□ -0.35
CLPTM1-211ENST00000589347 RRP1P56182 461 aaKnown RBP12.86□□□□□ -0.35
CLPTM1-211ENST00000589347 MAP3K10Q02779 954 aa12.86□□□□□ -0.35
CLPTM1-211ENST00000589347 KIF22Q14807 665 aa12.86□□□□□ -0.35
CLPTM1-211ENST00000589347 ANKRD23Q86SG2 305 aa12.86□□□□□ -0.35
CLPTM1-211ENST00000589347 NBPF11Q86T75 865 aa12.86□□□□□ -0.35
CLPTM1-211ENST00000589347 SIRT2Q8IXJ6 389 aa12.86□□□□□ -0.35
CLPTM1-211ENST00000589347 PARK7Q99497 189 aaKnown RBP12.86□□□□□ -0.35
CLPTM1-211ENST00000589347 DNAJC2Q99543 621 aaKnown RBP12.86□□□□□ -0.35
CLPTM1-211ENST00000589347 PTPN18Q99952 460 aa12.86□□□□□ -0.35
CLPTM1-211ENST00000589347 BCL11AQ9H165 835 aa12.86□□□□□ -0.35
CLPTM1-211ENST00000589347 PI4KBQ9UBF8 816 aa12.86□□□□□ -0.35
CLPTM1-211ENST00000589347 BTBD19C9JJ37 291 aa12.85□□□□□ -0.35
CLPTM1-211ENST00000589347 CXCL11O14625 94 aa12.85□□□□□ -0.35
CLPTM1-211ENST00000589347 SLC4A8Q2Y0W8 1093 aa12.85□□□□□ -0.35
CLPTM1-211ENST00000589347 FASTKD5Q7L8L6 764 aaKnown RBP12.85□□□□□ -0.35
CLPTM1-211ENST00000589347 MAPKAPK5Q8IW41 473 aa12.85□□□□□ -0.35
CLPTM1-211ENST00000589347 FAM43AQ8N2R8 423 aa12.85□□□□□ -0.35
CLPTM1-211ENST00000589347 CRACR2BQ8N4Y2 399 aaPredicted RBP12.85□□□□□ -0.35
CLPTM1-211ENST00000589347 TGFBRAP1Q8WUH2 860 aa12.85□□□□□ -0.35
CLPTM1-211ENST00000589347 SHISA4Q96DD7 197 aa12.85□□□□□ -0.35
CLPTM1-211ENST00000589347 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.85□□□□□ -0.35
CLPTM1-211ENST00000589347 AS3MTQ9HBK9 375 aa12.85□□□□□ -0.35
CLPTM1-211ENST00000589347 VCANP13611 3396 aa12.85□□□□□ -0.35
CLPTM1-211ENST00000589347 PHF20L1A8MW92 1017 aa12.84□□□□□ -0.35
CLPTM1-211ENST00000589347 GOLIM4O00461 696 aa12.84□□□□□ -0.35
CLPTM1-211ENST00000589347 PTPRAP18433 802 aa12.84□□□□□ -0.35
CLPTM1-211ENST00000589347 UBE2Q1Q7Z7E8 422 aa12.84□□□□□ -0.35
CLPTM1-211ENST00000589347 ADGRA1Q86SQ6 560 aa12.84□□□□□ -0.35
CLPTM1-211ENST00000589347 MIGA1Q8NAN2 632 aa12.84□□□□□ -0.35
CLPTM1-211ENST00000589347 NDUFB9Q9Y6M9 179 aa12.84□□□□□ -0.35
CLPTM1-211ENST00000589347 ZHX2Q9Y6X8 837 aa12.84□□□□□ -0.35
CLPTM1-211ENST00000589347 A0A0G2JLL6 359 aaPredicted RBP12.83□□□□□ -0.36
CLPTM1-211ENST00000589347 MAGEB6P1A0A0J9YX57 407 aa12.83□□□□□ -0.36
CLPTM1-211ENST00000589347 A0A1W2PPC1 479 aa12.83□□□□□ -0.36
CLPTM1-211ENST00000589347 PDHXO00330 501 aa12.83□□□□□ -0.36
CLPTM1-211ENST00000589347 TLR2O60603 784 aa12.83□□□□□ -0.36
CLPTM1-211ENST00000589347 GADL1Q6ZQY3 521 aa12.83□□□□□ -0.36
CLPTM1-211ENST00000589347 PRRT2Q7Z6L0 340 aaPredicted RBP12.83□□□□□ -0.36
CLPTM1-211ENST00000589347 ANTXR1Q9H6X2 564 aa12.83□□□□□ -0.36
CLPTM1-211ENST00000589347 GINM1Q9NU53 330 aa12.83□□□□□ -0.36
CLPTM1-211ENST00000589347 PAG1Q9NWQ8 432 aa12.83□□□□□ -0.36
CLPTM1-211ENST00000589347 PNMA3Q9UL41 463 aa12.83□□□□□ -0.36
CLPTM1-211ENST00000589347 FAM196BA6NMK8 535 aa12.82□□□□□ -0.36
CLPTM1-211ENST00000589347 PDE6AP16499 860 aa12.82□□□□□ -0.36
CLPTM1-211ENST00000589347 ATP5JP18859 108 aa12.82□□□□□ -0.36
CLPTM1-211ENST00000589347 CAP2P40123 477 aa12.82□□□□□ -0.36
CLPTM1-211ENST00000589347 DYNLL1P63167 89 aaKnown RBP12.82□□□□□ -0.36
CLPTM1-211ENST00000589347 PABPC4Q13310 644 aaKnown RBP eCLIP12.82□□□□□ -0.36
CLPTM1-211ENST00000589347 SLC9C2Q5TAH2 1124 aa12.82□□□□□ -0.36
CLPTM1-211ENST00000589347 ZSCAN25Q6NSZ9 544 aa12.82□□□□□ -0.36
CLPTM1-211ENST00000589347 CRNKL1Q9BZJ0 848 aaKnown RBP12.82□□□□□ -0.36
CLPTM1-211ENST00000589347 BOLA2Q9H3K6 86 aa12.82□□□□□ -0.36
CLPTM1-211ENST00000589347 ZBTB47Q9UFB7 747 aaPredicted RBP12.82□□□□□ -0.36
CLPTM1-211ENST00000589347 SLC45A1Q9Y2W3 748 aa12.82□□□□□ -0.36
CLPTM1-211ENST00000589347 DOCK3Q8IZD9 2030 aa12.81□□□□□ -0.36
CLPTM1-211ENST00000589347 TRIM75PA6NK02 468 aa12.81□□□□□ -0.36
CLPTM1-211ENST00000589347 USP17L5A8MUK1 530 aa12.81□□□□□ -0.36
CLPTM1-211ENST00000589347 GNRH1P01148 92 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms