RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 PDE4BQ07343 736 aa30.64■■■□□ 2.5
SCAMP4-210ENST00000588555 STK3Q13188 491 aa30.64■■■□□ 2.5
SCAMP4-210ENST00000588555 DYNLL2Q96FJ2 89 aa30.64■■■□□ 2.5
SCAMP4-210ENST00000588555 BRPF3Q9ULD4 1205 aa30.64■■■□□ 2.5
SCAMP4-210ENST00000588555 TNIP1Q15025 636 aa30.64■■■□□ 2.49
SCAMP4-210ENST00000588555 PRMT6Q96LA8 375 aaPredicted RBP30.64■■■□□ 2.49
SCAMP4-210ENST00000588555 IDI2Q9BXS1 227 aa30.64■■■□□ 2.49
SCAMP4-210ENST00000588555 LY9Q9HBG7 655 aa30.64■■■□□ 2.49
SCAMP4-210ENST00000588555 HDAC9Q9UKV0 1011 aa30.64■■■□□ 2.49
SCAMP4-210ENST00000588555 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.64■■■□□ 2.49
SCAMP4-210ENST00000588555 PDIA3P30101 505 aaKnown RBP30.63■■■□□ 2.49
SCAMP4-210ENST00000588555 OGFOD1Q8N543 542 aa30.63■■■□□ 2.49
SCAMP4-210ENST00000588555 OSBPL5Q9H0X9 879 aaPredicted RBP30.63■■■□□ 2.49
SCAMP4-210ENST00000588555 DICER1Q9UPY3 1922 aaKnown RBP30.62■■■□□ 2.49
SCAMP4-210ENST00000588555 SPDYE2BA6NHP3 402 aa30.62■■■□□ 2.49
SCAMP4-210ENST00000588555 SPDYE6P0CI01 402 aa30.62■■■□□ 2.49
SCAMP4-210ENST00000588555 LIFRP42702 1097 aa30.62■■■□□ 2.49
SCAMP4-210ENST00000588555 TMEM67Q5HYA8 995 aa30.62■■■□□ 2.49
SCAMP4-210ENST00000588555 ARHGAP27Q6ZUM4 889 aa30.62■■■□□ 2.49
SCAMP4-210ENST00000588555 SGMS1Q86VZ5 419 aa30.62■■■□□ 2.49
SCAMP4-210ENST00000588555 SENP2Q9HC62 589 aa30.62■■■□□ 2.49
SCAMP4-210ENST00000588555 IFIT3O14879 490 aaKnown RBP30.61■■■□□ 2.49
SCAMP4-210ENST00000588555 KLF18A0A0U1RQI7 1052 aa30.61■■■□□ 2.49
SCAMP4-210ENST00000588555 RANBP6O60518 1105 aaKnown RBP30.61■■■□□ 2.49
SCAMP4-210ENST00000588555 NPM3O75607 178 aaKnown RBP30.61■■■□□ 2.49
SCAMP4-210ENST00000588555 SCRN1Q12765 414 aa30.61■■■□□ 2.49
SCAMP4-210ENST00000588555 C16orf86Q6ZW13 317 aa30.61■■■□□ 2.49
SCAMP4-210ENST00000588555 ZKSCAN3Q9BRR0 538 aa30.61■■■□□ 2.49
SCAMP4-210ENST00000588555 TDRD3Q9H7E2 651 aaKnown RBP30.61■■■□□ 2.49
SCAMP4-210ENST00000588555 FAM198AQ9UFP1 575 aa30.61■■■□□ 2.49
SCAMP4-210ENST00000588555 SBF1O95248 1867 aa30.61■■■□□ 2.49
SCAMP4-210ENST00000588555 NT5C2P49902 561 aa30.6■■■□□ 2.49
SCAMP4-210ENST00000588555 CACNB3P54284 484 aa30.6■■■□□ 2.49
SCAMP4-210ENST00000588555 MTMR14Q8NCE2 650 aa30.6■■■□□ 2.49
SCAMP4-210ENST00000588555 SART3Q15020 963 aaKnown RBP30.59■■■□□ 2.49
SCAMP4-210ENST00000588555 SLC44A5Q8NCS7 719 aa30.59■■■□□ 2.49
SCAMP4-210ENST00000588555 HPS5Q9UPZ3 1129 aa30.59■■■□□ 2.49
SCAMP4-210ENST00000588555 YBX3P16989 372 aaKnown RBP eCLIP30.59■■■□□ 2.49
SCAMP4-210ENST00000588555 LMNB1P20700 586 aa30.59■■■□□ 2.49
SCAMP4-210ENST00000588555 RPS12P25398 132 aaKnown RBP30.59■■■□□ 2.49
SCAMP4-210ENST00000588555 SEC23AQ15436 765 aa30.59■■■□□ 2.49
SCAMP4-210ENST00000588555 EIF6P56537 245 aaKnown RBP30.58■■■□□ 2.49
SCAMP4-210ENST00000588555 DLGAP5Q15398 846 aa30.58■■■□□ 2.49
SCAMP4-210ENST00000588555 TTC6Q86TZ1 520 aa30.58■■■□□ 2.49
SCAMP4-210ENST00000588555 ZFPM1Q8IX07 1006 aa30.58■■■□□ 2.49
SCAMP4-210ENST00000588555 UBAC1Q9BSL1 405 aa30.58■■■□□ 2.49
SCAMP4-210ENST00000588555 TNKSO95271 1327 aa30.57■■■□□ 2.48
SCAMP4-210ENST00000588555 GABPAQ06546 454 aa30.57■■■□□ 2.48
SCAMP4-210ENST00000588555 APOA5Q6Q788 366 aa30.57■■■□□ 2.48
SCAMP4-210ENST00000588555 ZBED3Q96IU2 234 aaPredicted RBP30.57■■■□□ 2.48
SCAMP4-210ENST00000588555 ZSCAN10Q96SZ4 725 aaPredicted RBP30.57■■■□□ 2.48
SCAMP4-210ENST00000588555 SMC3Q9UQE7 1217 aa30.57■■■□□ 2.48
SCAMP4-210ENST00000588555 ZNF541Q9H0D2 1346 aa30.57■■■□□ 2.48
SCAMP4-210ENST00000588555 GOLGA8BA8MQT2 603 aa30.56■■■□□ 2.48
SCAMP4-210ENST00000588555 CDK8P49336 464 aa30.56■■■□□ 2.48
SCAMP4-210ENST00000588555 FAM47AQ5JRC9 791 aa30.56■■■□□ 2.48
SCAMP4-210ENST00000588555 RASA1P20936 1047 aa30.56■■■□□ 2.48
SCAMP4-210ENST00000588555 MMP14P50281 582 aa30.56■■■□□ 2.48
SCAMP4-210ENST00000588555 ZNF280AP59817 542 aaPredicted RBP30.56■■■□□ 2.48
SCAMP4-210ENST00000588555 WTAPQ15007 396 aa30.56■■■□□ 2.48
SCAMP4-210ENST00000588555 IQCA1Q86XH1 822 aa30.56■■■□□ 2.48
SCAMP4-210ENST00000588555 ENAHQ8N8S7 591 aaPredicted RBP30.56■■■□□ 2.48
SCAMP4-210ENST00000588555 MKNK2Q9HBH9 465 aa30.56■■■□□ 2.48
SCAMP4-210ENST00000588555 NAP1L2Q9ULW6 460 aaPredicted RBP30.56■■■□□ 2.48
SCAMP4-210ENST00000588555 SIPA1L1O43166 1804 aa30.56■■■□□ 2.48
SCAMP4-210ENST00000588555 DTNBO60941 627 aa30.55■■■□□ 2.48
SCAMP4-210ENST00000588555 CCT2P78371 535 aaKnown RBP30.55■■■□□ 2.48
SCAMP4-210ENST00000588555 PKP1Q13835 747 aa30.55■■■□□ 2.48
SCAMP4-210ENST00000588555 RAB3GAP1Q15042 981 aa30.55■■■□□ 2.48
SCAMP4-210ENST00000588555 ZNF287Q9HBT7 754 aa30.55■■■□□ 2.48
SCAMP4-210ENST00000588555 NCOA5Q9HCD5 579 aaKnown RBP30.55■■■□□ 2.48
SCAMP4-210ENST00000588555 SHTN1A0MZ66 631 aa30.54■■■□□ 2.48
SCAMP4-210ENST00000588555 ERICH2A1L162 156 aa30.54■■■□□ 2.48
SCAMP4-210ENST00000588555 GJB2P29033 226 aa30.54■■■□□ 2.48
SCAMP4-210ENST00000588555 COL2A1P02458 1487 aaPredicted RBP30.54■■■□□ 2.48
SCAMP4-210ENST00000588555 TSPY2A6NKD2 308 aa30.54■■■□□ 2.48
SCAMP4-210ENST00000588555 TMTC2Q8N394 836 aa30.54■■■□□ 2.48
SCAMP4-210ENST00000588555 DPF2Q92785 391 aa30.54■■■□□ 2.48
SCAMP4-210ENST00000588555 ENTPD3O75355 529 aa30.53■■■□□ 2.48
SCAMP4-210ENST00000588555 CTDNEP1O95476 244 aa30.53■■■□□ 2.48
SCAMP4-210ENST00000588555 GMPSP49915 693 aaPredicted RBP30.53■■■□□ 2.48
SCAMP4-210ENST00000588555 NUCB2P80303 420 aa30.53■■■□□ 2.48
SCAMP4-210ENST00000588555 TCP10Q12799 353 aa30.53■■■□□ 2.48
SCAMP4-210ENST00000588555 SPDYE2Q495Y8 402 aa30.53■■■□□ 2.48
SCAMP4-210ENST00000588555 NFXL1Q6ZNB6 911 aa30.53■■■□□ 2.48
SCAMP4-210ENST00000588555 SH3BP5LQ7L8J4 393 aa30.53■■■□□ 2.48
SCAMP4-210ENST00000588555 LLPHQ9BRT6 129 aaKnown RBP30.53■■■□□ 2.48
SCAMP4-210ENST00000588555 DHX36Q9H2U1 1008 aaKnown RBP30.53■■■□□ 2.48
SCAMP4-210ENST00000588555 MYOZ2Q9NPC6 264 aa30.53■■■□□ 2.48
SCAMP4-210ENST00000588555 ZNF70Q9UC06 446 aaPredicted RBP30.53■■■□□ 2.48
SCAMP4-210ENST00000588555 TFAP4Q01664 338 aa30.52■■■□□ 2.48
SCAMP4-210ENST00000588555 SMARCC2Q8TAQ2 1214 aa30.52■■■□□ 2.48
SCAMP4-210ENST00000588555 EHD4Q9H223 541 aa30.52■■■□□ 2.48
SCAMP4-210ENST00000588555 SERPINB13Q9UIV8 391 aa30.52■■■□□ 2.48
SCAMP4-210ENST00000588555 ATRNL1Q5VV63 1379 aa30.52■■■□□ 2.48
SCAMP4-210ENST00000588555 DDTLA6NHG4 134 aaPredicted RBP30.51■■■□□ 2.48
SCAMP4-210ENST00000588555 CCDC69A6NI79 296 aa30.51■■■□□ 2.48
SCAMP4-210ENST00000588555 NMT2O60551 498 aa30.51■■■□□ 2.48
SCAMP4-210ENST00000588555 RAB11FIP4Q86YS3 637 aa30.51■■■□□ 2.48
SCAMP4-210ENST00000588555 NSUN7Q8NE18 718 aaKnown RBP30.51■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms