RNA–Protein interactions for RNA: ENST00000588408.5

CNTD1-204, Transcript of cyclin N-terminal domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTD1, Length 2,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-204ENST00000588408 ARID5BQ14865 1188 aa16.05■□□□□ 0.16
CNTD1-204ENST00000588408 SPECC1Q5M775 1068 aa16.05■□□□□ 0.16
CNTD1-204ENST00000588408 FBXO33Q7Z6M2 555 aa16.05■□□□□ 0.16
CNTD1-204ENST00000588408 ARHGEF1Q92888 912 aaKnown RBP16.05■□□□□ 0.16
CNTD1-204ENST00000588408 ANO10Q9NW15 660 aa16.05■□□□□ 0.16
CNTD1-204ENST00000588408 KIAA1468Q9P260 1216 aa16.05■□□□□ 0.16
CNTD1-204ENST00000588408 CCNL1Q9UK58 526 aaPredicted RBP16.05■□□□□ 0.16
CNTD1-204ENST00000588408 TNKSO95271 1327 aa16.05■□□□□ 0.16
CNTD1-204ENST00000588408 COL24A1Q17RW2 1714 aa16.04■□□□□ 0.16
CNTD1-204ENST00000588408 CMA1P23946 247 aa16.04■□□□□ 0.16
CNTD1-204ENST00000588408 PRDX5P30044 214 aa16.04■□□□□ 0.16
CNTD1-204ENST00000588408 TOB1P50616 345 aaPredicted RBP16.04■□□□□ 0.16
CNTD1-204ENST00000588408 MECOMQ03112 1051 aa16.04■□□□□ 0.16
CNTD1-204ENST00000588408 TRIM29Q14134 588 aa16.04■□□□□ 0.16
CNTD1-204ENST00000588408 SEC23AQ15436 765 aa16.04■□□□□ 0.16
CNTD1-204ENST00000588408 SLC4A8Q2Y0W8 1093 aa16.04■□□□□ 0.16
CNTD1-204ENST00000588408 NLRP3Q96P20 1036 aa16.04■□□□□ 0.16
CNTD1-204ENST00000588408 SPTLC3Q9NUV7 552 aa16.04■□□□□ 0.16
CNTD1-204ENST00000588408 CLIP2Q9UDT6 1046 aa16.04■□□□□ 0.16
CNTD1-204ENST00000588408 UQCRHLA0A096LP55 91 aa16.04■□□□□ 0.16
CNTD1-204ENST00000588408 ZPR1O75312 459 aa16.04■□□□□ 0.16
CNTD1-204ENST00000588408 UQCRHP07919 91 aa16.04■□□□□ 0.16
CNTD1-204ENST00000588408 TM4SF1P30408 202 aa16.04■□□□□ 0.16
CNTD1-204ENST00000588408 GRIN1Q05586 938 aa16.04■□□□□ 0.16
CNTD1-204ENST00000588408 NR5A1Q13285 461 aa16.04■□□□□ 0.16
CNTD1-204ENST00000588408 CRACR2BQ8N4Y2 399 aaPredicted RBP16.04■□□□□ 0.16
CNTD1-204ENST00000588408 FANCBQ8NB91 859 aa16.04■□□□□ 0.16
CNTD1-204ENST00000588408 OXER1Q8TDS5 423 aa16.04■□□□□ 0.16
CNTD1-204ENST00000588408 NSUN4Q96CB9 384 aaKnown RBP16.04■□□□□ 0.16
CNTD1-204ENST00000588408 AATFQ9NY61 560 aaKnown RBP eCLIP16.04■□□□□ 0.16
CNTD1-204ENST00000588408 STK36Q9NRP7 1315 aa16.03■□□□□ 0.16
CNTD1-204ENST00000588408 DUOX1Q9NRD9 1551 aa16.03■□□□□ 0.16
CNTD1-204ENST00000588408 ERICH2A1L162 156 aa16.03■□□□□ 0.16
CNTD1-204ENST00000588408 GOLGA6L6A8MZA4 724 aa16.03■□□□□ 0.16
CNTD1-204ENST00000588408 SART3Q15020 963 aaKnown RBP16.03■□□□□ 0.16
CNTD1-204ENST00000588408 ENAHQ8N8S7 591 aaPredicted RBP16.03■□□□□ 0.16
CNTD1-204ENST00000588408 UBAC1Q9BSL1 405 aa16.03■□□□□ 0.16
CNTD1-204ENST00000588408 NID2Q14112 1375 aa16.03■□□□□ 0.16
CNTD1-204ENST00000588408 TAF1LQ8IZX4 1826 aa16.03■□□□□ 0.16
CNTD1-204ENST00000588408 BECN2A8MW95 431 aa16.02■□□□□ 0.16
CNTD1-204ENST00000588408 MMP1P03956 469 aa16.02■□□□□ 0.16
CNTD1-204ENST00000588408 CYP2D6P10635 497 aa16.02■□□□□ 0.16
CNTD1-204ENST00000588408 CTR9Q6PD62 1173 aa16.02■□□□□ 0.16
CNTD1-204ENST00000588408 DIS3L2Q8IYB7 885 aaKnown RBP16.02■□□□□ 0.16
CNTD1-204ENST00000588408 RNF41Q9H4P4 317 aaPredicted RBP16.02■□□□□ 0.16
CNTD1-204ENST00000588408 ANAPC4Q9UJX5 808 aa16.02■□□□□ 0.16
CNTD1-204ENST00000588408 USP21Q9UK80 565 aa16.02■□□□□ 0.16
CNTD1-204ENST00000588408 USP17L12C9JPN9 530 aa16.02■□□□□ 0.15
CNTD1-204ENST00000588408 USP17L21D6R901 530 aa16.02■□□□□ 0.15
CNTD1-204ENST00000588408 NMT2O60551 498 aa16.02■□□□□ 0.15
CNTD1-204ENST00000588408 SLC3A2P08195 630 aaKnown RBP16.02■□□□□ 0.15
CNTD1-204ENST00000588408 CACTINQ8WUQ7 758 aaKnown RBP16.02■□□□□ 0.15
CNTD1-204ENST00000588408 FAM205CA6NFA0 338 aa16.01■□□□□ 0.15
CNTD1-204ENST00000588408 CAVIN2O95810 425 aa16.01■□□□□ 0.15
CNTD1-204ENST00000588408 HIBADHP31937 336 aaKnown RBP16.01■□□□□ 0.15
CNTD1-204ENST00000588408 RBM10P98175 930 aaKnown RBP16.01■□□□□ 0.15
CNTD1-204ENST00000588408 RC3H1Q5TC82 1133 aaKnown RBP16.01■□□□□ 0.15
CNTD1-204ENST00000588408 NOSTRINQ8IVI9 506 aa16.01■□□□□ 0.15
CNTD1-204ENST00000588408 CEP57L1Q8IYX8 460 aa16.01■□□□□ 0.15
CNTD1-204ENST00000588408 GPR101Q96P66 508 aaPredicted RBP16.01■□□□□ 0.15
CNTD1-204ENST00000588408 HPSEQ9Y251 543 aa16.01■□□□□ 0.15
CNTD1-204ENST00000588408 PLEKHA8P1O95397 391 aa16.01■□□□□ 0.15
CNTD1-204ENST00000588408 SYKP43405 635 aa16.01■□□□□ 0.15
CNTD1-204ENST00000588408 SARM1Q6SZW1 724 aa16.01■□□□□ 0.15
CNTD1-204ENST00000588408 FNBP4Q8N3X1 1017 aaPredicted RBP16.01■□□□□ 0.15
CNTD1-204ENST00000588408 ESR2Q92731 530 aa16.01■□□□□ 0.15
CNTD1-204ENST00000588408 NYXQ9GZU5 481 aa16.01■□□□□ 0.15
CNTD1-204ENST00000588408 RTCBQ9Y3I0 505 aaKnown RBP16.01■□□□□ 0.15
CNTD1-204ENST00000588408 PPP6R2O75170 966 aa16■□□□□ 0.15
CNTD1-204ENST00000588408 ATP2B1P20020 1258 aa16■□□□□ 0.15
CNTD1-204ENST00000588408 PNOCQ13519 176 aa16■□□□□ 0.15
CNTD1-204ENST00000588408 TSC1Q92574 1164 aa16■□□□□ 0.15
CNTD1-204ENST00000588408 ZSCAN10Q96SZ4 725 aaPredicted RBP16■□□□□ 0.15
CNTD1-204ENST00000588408 NHSQ6T4R5 1651 aa16■□□□□ 0.15
CNTD1-204ENST00000588408 SBF2Q86WG5 1849 aa16■□□□□ 0.15
CNTD1-204ENST00000588408 FOXN1O15353 648 aa16■□□□□ 0.15
CNTD1-204ENST00000588408 FAM47AQ5JRC9 791 aa16■□□□□ 0.15
CNTD1-204ENST00000588408 TPTE2Q6XPS3 522 aa16■□□□□ 0.15
CNTD1-204ENST00000588408 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16■□□□□ 0.15
CNTD1-204ENST00000588408 TRIM22Q8IYM9 498 aa16■□□□□ 0.15
CNTD1-204ENST00000588408 BRIP1Q9BX63 1249 aa16■□□□□ 0.15
CNTD1-204ENST00000588408 PCDHB6Q9Y5E3 794 aa16■□□□□ 0.15
CNTD1-204ENST00000588408 TPM3P06753 285 aa15.99■□□□□ 0.15
CNTD1-204ENST00000588408 TERF1P54274 439 aa15.99■□□□□ 0.15
CNTD1-204ENST00000588408 HSP90AA2PQ14568 343 aaPredicted RBP15.99■□□□□ 0.15
CNTD1-204ENST00000588408 LONRF3Q496Y0 759 aa15.99■□□□□ 0.15
CNTD1-204ENST00000588408 EARS2Q5JPH6 523 aaKnown RBP15.99■□□□□ 0.15
CNTD1-204ENST00000588408 RESP18Q5W5W9 173 aa15.99■□□□□ 0.15
CNTD1-204ENST00000588408 VPS54Q9P1Q0 977 aa15.99■□□□□ 0.15
CNTD1-204ENST00000588408 DEXIO95424 95 aa15.99■□□□□ 0.15
CNTD1-204ENST00000588408 GRIK5Q16478 980 aa15.99■□□□□ 0.15
CNTD1-204ENST00000588408 PKN1Q16512 942 aa15.99■□□□□ 0.15
CNTD1-204ENST00000588408 RGS22Q8NE09 1264 aa15.99■□□□□ 0.15
CNTD1-204ENST00000588408 THSD7AQ9UPZ6 1657 aa15.99■□□□□ 0.15
CNTD1-204ENST00000588408 CCDC88AQ3V6T2 1871 aa15.99■□□□□ 0.15
CNTD1-204ENST00000588408 IRS2Q9Y4H2 1338 aa15.98■□□□□ 0.15
CNTD1-204ENST00000588408 NPHP1O15259 732 aa15.98■□□□□ 0.15
CNTD1-204ENST00000588408 FUT2Q10981 343 aa15.98■□□□□ 0.15
CNTD1-204ENST00000588408 NFIXQ14938 502 aa15.98■□□□□ 0.15
CNTD1-204ENST00000588408 NOM1Q5C9Z4 860 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms