RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 GCC1Q96CN9 775 aa20.77■□□□□ 0.92
TMED1-203ENST00000588259 GPR108Q9NPR9 543 aa20.77■□□□□ 0.92
TMED1-203ENST00000588259 AATFQ9NY61 560 aaKnown RBP eCLIP20.77■□□□□ 0.92
TMED1-203ENST00000588259 COL2A1P02458 1487 aaPredicted RBP20.76■□□□□ 0.91
TMED1-203ENST00000588259 BAG3O95817 575 aa20.76■□□□□ 0.91
TMED1-203ENST00000588259 PRKCZQ05513 592 aa20.76■□□□□ 0.91
TMED1-203ENST00000588259 TBC1D12O60347 775 aa20.75■□□□□ 0.91
TMED1-203ENST00000588259 RLBP1P12271 317 aa20.75■□□□□ 0.91
TMED1-203ENST00000588259 PLCG2P16885 1265 aa20.75■□□□□ 0.91
TMED1-203ENST00000588259 MTFR1Q15390 333 aa20.75■□□□□ 0.91
TMED1-203ENST00000588259 TRIM34Q9BYJ4 488 aa20.75■□□□□ 0.91
TMED1-203ENST00000588259 AGTPBP1Q9UPW5 1226 aa20.75■□□□□ 0.91
TMED1-203ENST00000588259 SLC45A1Q9Y2W3 748 aa20.75■□□□□ 0.91
TMED1-203ENST00000588259 BRCA2P51587 3418 aa20.75■□□□□ 0.91
TMED1-203ENST00000588259 CDK5RAP2Q96SN8 1893 aa20.75■□□□□ 0.91
TMED1-203ENST00000588259 CEP290O15078 2479 aa20.75■□□□□ 0.91
TMED1-203ENST00000588259 SPP2Q13103 211 aa20.74■□□□□ 0.91
TMED1-203ENST00000588259 DIEXFQ68CQ4 756 aaKnown RBP20.74■□□□□ 0.91
TMED1-203ENST00000588259 TAOK2Q9UL54 1235 aa20.74■□□□□ 0.91
TMED1-203ENST00000588259 TNPO2O14787 897 aaKnown RBP20.73■□□□□ 0.91
TMED1-203ENST00000588259 ZAP70P43403 619 aa20.73■□□□□ 0.91
TMED1-203ENST00000588259 TREML2Q5T2D2 321 aa20.73■□□□□ 0.91
TMED1-203ENST00000588259 MAPKAPK5Q8IW41 473 aa20.73■□□□□ 0.91
TMED1-203ENST00000588259 TGFBRAP1Q8WUH2 860 aa20.73■□□□□ 0.91
TMED1-203ENST00000588259 PNMA3Q9UL41 463 aa20.73■□□□□ 0.91
TMED1-203ENST00000588259 LOC285556D6RIA3 1793 aa20.72■□□□□ 0.91
TMED1-203ENST00000588259 FOCADQ5VW36 1801 aa20.72■□□□□ 0.91
TMED1-203ENST00000588259 CYP2E1P05181 493 aaPredicted RBP20.72■□□□□ 0.91
TMED1-203ENST00000588259 CCL5P13501 91 aa20.72■□□□□ 0.91
TMED1-203ENST00000588259 HMGCS2P54868 508 aa20.72■□□□□ 0.91
TMED1-203ENST00000588259 UBXN2AP68543 259 aa20.72■□□□□ 0.91
TMED1-203ENST00000588259 CRACR2BQ8N4Y2 399 aaPredicted RBP20.72■□□□□ 0.91
TMED1-203ENST00000588259 ANKRD13CQ8N6S4 541 aa20.72■□□□□ 0.91
TMED1-203ENST00000588259 ZNF280CQ8ND82 737 aa20.72■□□□□ 0.91
TMED1-203ENST00000588259 CCDC8Q9H0W5 538 aaPredicted RBP20.72■□□□□ 0.91
TMED1-203ENST00000588259 TLR7Q9NYK1 1049 aaKnown RBP20.72■□□□□ 0.91
TMED1-203ENST00000588259 PI4KBQ9UBF8 816 aa20.72■□□□□ 0.91
TMED1-203ENST00000588259 HERC5Q9UII4 1024 aaKnown RBP20.72■□□□□ 0.91
TMED1-203ENST00000588259 DBNLQ9UJU6 430 aaKnown RBP20.72■□□□□ 0.91
TMED1-203ENST00000588259 GABRQQ9UN88 632 aa20.72■□□□□ 0.91
TMED1-203ENST00000588259 IDH1O75874 414 aaKnown RBP20.71■□□□□ 0.91
TMED1-203ENST00000588259 CAP2P40123 477 aa20.71■□□□□ 0.91
TMED1-203ENST00000588259 SLAIN1Q8ND83 568 aa20.71■□□□□ 0.91
TMED1-203ENST00000588259 RNF208Q9H0X6 261 aa20.71■□□□□ 0.91
TMED1-203ENST00000588259 DHX36Q9H2U1 1008 aaKnown RBP20.71■□□□□ 0.91
TMED1-203ENST00000588259 PIH1D3Q9NQM4 214 aaKnown RBP20.71■□□□□ 0.91
TMED1-203ENST00000588259 SAP30BPQ9UHR5 308 aaKnown RBP20.71■□□□□ 0.91
TMED1-203ENST00000588259 SIPA1L1O43166 1804 aa20.71■□□□□ 0.91
TMED1-203ENST00000588259 USP17L5A8MUK1 530 aa20.7■□□□□ 0.9
TMED1-203ENST00000588259 ZBTB7BO15156 539 aaPredicted RBP20.7■□□□□ 0.9
TMED1-203ENST00000588259 ADGRA1Q86SQ6 560 aa20.7■□□□□ 0.9
TMED1-203ENST00000588259 PROCA1Q8NCQ7 364 aaPredicted RBP20.7■□□□□ 0.9
TMED1-203ENST00000588259 AS3MTQ9HBK9 375 aa20.7■□□□□ 0.9
TMED1-203ENST00000588259 FLT1P17948 1338 aa20.7■□□□□ 0.9
TMED1-203ENST00000588259 ADCY3O60266 1144 aa20.69■□□□□ 0.9
TMED1-203ENST00000588259 ELNP15502 786 aa20.69■□□□□ 0.9
TMED1-203ENST00000588259 CYP7A1P22680 504 aa20.69■□□□□ 0.9
TMED1-203ENST00000588259 FLT3LGP49771 235 aa20.69■□□□□ 0.9
TMED1-203ENST00000588259 PABPC4Q13310 644 aaKnown RBP eCLIP20.69■□□□□ 0.9
TMED1-203ENST00000588259 RRP1BQ14684 758 aaKnown RBP20.69■□□□□ 0.9
TMED1-203ENST00000588259 NKX2-3Q8TAU0 364 aa20.69■□□□□ 0.9
TMED1-203ENST00000588259 PANK1Q8TE04 598 aa20.69■□□□□ 0.9
TMED1-203ENST00000588259 TBC1D2Q9BYX2 928 aa20.69■□□□□ 0.9
TMED1-203ENST00000588259 NOP58Q9Y2X3 529 aaKnown RBP20.69■□□□□ 0.9
TMED1-203ENST00000588259 DOCK3Q8IZD9 2030 aa20.69■□□□□ 0.9
TMED1-203ENST00000588259 MTMR2Q13614 643 aa20.68■□□□□ 0.9
TMED1-203ENST00000588259 CEP85Q6P2H3 762 aa20.68■□□□□ 0.9
TMED1-203ENST00000588259 COA7Q96BR5 231 aa20.68■□□□□ 0.9
TMED1-203ENST00000588259 EAF2Q96CJ1 260 aaPredicted RBP20.68■□□□□ 0.9
TMED1-203ENST00000588259 SHISA4Q96DD7 197 aa20.68■□□□□ 0.9
TMED1-203ENST00000588259 ZNF512BQ96KM6 892 aaPredicted RBP20.68■□□□□ 0.9
TMED1-203ENST00000588259 BCL11AQ9H165 835 aa20.68■□□□□ 0.9
TMED1-203ENST00000588259 PALD1Q9ULE6 856 aa20.68■□□□□ 0.9
TMED1-203ENST00000588259 EXOC6BQ9Y2D4 811 aa20.68■□□□□ 0.9
TMED1-203ENST00000588259 MYH1P12882 1939 aa20.68■□□□□ 0.9
TMED1-203ENST00000588259 HLA-DOAP06340 250 aa20.67■□□□□ 0.9
TMED1-203ENST00000588259 GJB1P08034 283 aa20.67■□□□□ 0.9
TMED1-203ENST00000588259 ASNSP08243 561 aa20.67■□□□□ 0.9
TMED1-203ENST00000588259 PPP4CP60510 307 aa20.67■□□□□ 0.9
TMED1-203ENST00000588259 DYNLL1P63167 89 aaKnown RBP20.67■□□□□ 0.9
TMED1-203ENST00000588259 HABP4Q5JVS0 413 aaKnown RBP20.67■□□□□ 0.9
TMED1-203ENST00000588259 AACSQ86V21 672 aa20.67■□□□□ 0.9
TMED1-203ENST00000588259 ERC1Q8IUD2 1116 aa20.67■□□□□ 0.9
TMED1-203ENST00000588259 MIGA1Q8NAN2 632 aa20.67■□□□□ 0.9
TMED1-203ENST00000588259 UNC93B1Q9H1C4 597 aa20.67■□□□□ 0.9
TMED1-203ENST00000588259 TMOD4Q9NZQ9 345 aa20.67■□□□□ 0.9
TMED1-203ENST00000588259 NDUFB9Q9Y6M9 179 aa20.67■□□□□ 0.9
TMED1-203ENST00000588259 ZBED9Q6R2W3 1325 aa20.67■□□□□ 0.9
TMED1-203ENST00000588259 GDF11O95390 407 aa20.66■□□□□ 0.9
TMED1-203ENST00000588259 INHAP05111 366 aa20.66■□□□□ 0.9
TMED1-203ENST00000588259 USP5P45974 858 aa20.66■□□□□ 0.9
TMED1-203ENST00000588259 GCLCP48506 637 aaPredicted RBP20.66■□□□□ 0.9
TMED1-203ENST00000588259 IRX3P78415 501 aaPredicted RBP20.66■□□□□ 0.9
TMED1-203ENST00000588259 FAM110CQ1W6H9 321 aa20.66■□□□□ 0.9
TMED1-203ENST00000588259 MAGEB6Q8N7X4 407 aa20.66■□□□□ 0.9
TMED1-203ENST00000588259 ASCC2Q9H1I8 757 aaPredicted RBP20.66■□□□□ 0.9
TMED1-203ENST00000588259 APBB1O00213 710 aa20.65■□□□□ 0.9
TMED1-203ENST00000588259 GJA8P48165 433 aa20.65■□□□□ 0.9
TMED1-203ENST00000588259 DPF3Q92784 378 aa20.65■□□□□ 0.9
TMED1-203ENST00000588259 H0YGN5 161 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms