RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 TBC1D12O60347 775 aa12.77□□□□□ -0.37
SMARCA4-213ENST00000587988 NF2P35240 595 aa12.77□□□□□ -0.37
SMARCA4-213ENST00000587988 GABPAQ06546 454 aa12.77□□□□□ -0.37
SMARCA4-213ENST00000587988 PPARAQ07869 468 aa12.77□□□□□ -0.37
SMARCA4-213ENST00000587988 RRP1BQ14684 758 aaKnown RBP12.77□□□□□ -0.37
SMARCA4-213ENST00000587988 C8orf34Q49A92 452 aa12.77□□□□□ -0.37
SMARCA4-213ENST00000587988 KIAA1211Q6ZU35 1233 aa12.77□□□□□ -0.37
SMARCA4-213ENST00000587988 FOXP4Q8IVH2 680 aaPredicted RBP12.77□□□□□ -0.37
SMARCA4-213ENST00000587988 SLC44A5Q8NCS7 719 aa12.77□□□□□ -0.37
SMARCA4-213ENST00000587988 MAP4K1Q92918 833 aa12.77□□□□□ -0.37
SMARCA4-213ENST00000587988 EHD4Q9H223 541 aa12.77□□□□□ -0.37
SMARCA4-213ENST00000587988 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.77□□□□□ -0.37
SMARCA4-213ENST00000587988 GBA2Q9HCG7 927 aaPredicted RBP12.77□□□□□ -0.37
SMARCA4-213ENST00000587988 ANO2Q9NQ90 1003 aa12.77□□□□□ -0.37
SMARCA4-213ENST00000587988 SERPINB13Q9UIV8 391 aa12.77□□□□□ -0.37
SMARCA4-213ENST00000587988 ANGEL1Q9UNK9 670 aaKnown RBP12.77□□□□□ -0.37
SMARCA4-213ENST00000587988 TACC3Q9Y6A5 838 aa12.77□□□□□ -0.37
SMARCA4-213ENST00000587988 PHF20L1A8MW92 1017 aa12.76□□□□□ -0.37
SMARCA4-213ENST00000587988 UBE2Q2LH0YL09 131 aa12.76□□□□□ -0.37
SMARCA4-213ENST00000587988 PPP1R12BO60237 982 aaPredicted RBP12.76□□□□□ -0.37
SMARCA4-213ENST00000587988 HAND2P61296 217 aa12.76□□□□□ -0.37
SMARCA4-213ENST00000587988 CTDSPL2Q05D32 466 aa12.76□□□□□ -0.37
SMARCA4-213ENST00000587988 TTLL12Q14166 644 aaPredicted RBP12.76□□□□□ -0.37
SMARCA4-213ENST00000587988 MAP3K11Q16584 847 aa12.76□□□□□ -0.37
SMARCA4-213ENST00000587988 DCAF15Q66K64 600 aa12.76□□□□□ -0.37
SMARCA4-213ENST00000587988 AMOTL1Q8IY63 956 aa12.76□□□□□ -0.37
SMARCA4-213ENST00000587988 CRACR2BQ8N4Y2 399 aaPredicted RBP12.76□□□□□ -0.37
SMARCA4-213ENST00000587988 KLRG1Q96E93 195 aa12.76□□□□□ -0.37
SMARCA4-213ENST00000587988 HOOK2Q96ED9 719 aa12.76□□□□□ -0.37
SMARCA4-213ENST00000587988 ZNF341Q9BYN7 854 aa12.76□□□□□ -0.37
SMARCA4-213ENST00000587988 NBPF3Q9H094 633 aa12.76□□□□□ -0.37
SMARCA4-213ENST00000587988 INCENPQ9NQS7 918 aa12.76□□□□□ -0.37
SMARCA4-213ENST00000587988 HERC5Q9UII4 1024 aaKnown RBP12.76□□□□□ -0.37
SMARCA4-213ENST00000587988 RBM8AQ9Y5S9 174 aaKnown RBP12.76□□□□□ -0.37
SMARCA4-213ENST00000587988 ZMYM6O95789 1325 aa12.76□□□□□ -0.37
SMARCA4-213ENST00000587988 SEC24BO95487 1268 aa12.75□□□□□ -0.37
SMARCA4-213ENST00000587988 INPP5BP32019 993 aa12.75□□□□□ -0.37
SMARCA4-213ENST00000587988 SHMT1P34896 483 aa12.75□□□□□ -0.37
SMARCA4-213ENST00000587988 CDK8P49336 464 aa12.75□□□□□ -0.37
SMARCA4-213ENST00000587988 APLP1P51693 650 aa12.75□□□□□ -0.37
SMARCA4-213ENST00000587988 SHROOM1Q2M3G4 852 aaPredicted RBP12.75□□□□□ -0.37
SMARCA4-213ENST00000587988 C16orf86Q6ZW13 317 aa12.75□□□□□ -0.37
SMARCA4-213ENST00000587988 ARMC9Q7Z3E5 817 aa12.75□□□□□ -0.37
SMARCA4-213ENST00000587988 C2orf69Q8N8R5 385 aa12.75□□□□□ -0.37
SMARCA4-213ENST00000587988 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.75□□□□□ -0.37
SMARCA4-213ENST00000587988 PAPPA2Q9BXP8 1791 aa12.75□□□□□ -0.37
SMARCA4-213ENST00000587988 ZNF112Q9UJU3 913 aa12.75□□□□□ -0.37
SMARCA4-213ENST00000587988 ANAPC4Q9UJX5 808 aa12.75□□□□□ -0.37
SMARCA4-213ENST00000587988 OTOFQ9HC10 1997 aa12.74□□□□□ -0.37
SMARCA4-213ENST00000587988 ROBO3Q96MS0 1386 aa12.74□□□□□ -0.37
SMARCA4-213ENST00000587988 TMEM88BA6NKF7 163 aa12.74□□□□□ -0.37
SMARCA4-213ENST00000587988 IREB2P48200 963 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-213ENST00000587988 C1QTNF8P60827 252 aa12.74□□□□□ -0.37
SMARCA4-213ENST00000587988 JAG1P78504 1218 aa12.74□□□□□ -0.37
SMARCA4-213ENST00000587988 TATDN1Q6P1N9 297 aa12.74□□□□□ -0.37
SMARCA4-213ENST00000587988 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.74□□□□□ -0.37
SMARCA4-213ENST00000587988 TBC1D10CQ8IV04 446 aa12.74□□□□□ -0.37
SMARCA4-213ENST00000587988 ZKSCAN4Q969J2 545 aaPredicted RBP12.74□□□□□ -0.37
SMARCA4-213ENST00000587988 CLMNQ96JQ2 1002 aa12.74□□□□□ -0.37
SMARCA4-213ENST00000587988 WRNIP1Q96S55 665 aa12.74□□□□□ -0.37
SMARCA4-213ENST00000587988 TRIM34Q9BYJ4 488 aa12.74□□□□□ -0.37
SMARCA4-213ENST00000587988 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.74□□□□□ -0.37
SMARCA4-213ENST00000587988 TAF6LQ9Y6J9 622 aa12.74□□□□□ -0.37
SMARCA4-213ENST00000587988 U3KPZ7 1027 aaPredicted RBP12.74□□□□□ -0.37
SMARCA4-213ENST00000587988 LAMA4Q16363 1823 aa12.74□□□□□ -0.37
SMARCA4-213ENST00000587988 ZNF213O14771 459 aa12.73□□□□□ -0.37
SMARCA4-213ENST00000587988 PRDM1O75626 825 aa12.73□□□□□ -0.37
SMARCA4-213ENST00000587988 CYP21A2P08686 494 aa12.73□□□□□ -0.37
SMARCA4-213ENST00000587988 FKBP1BP68106 108 aa12.73□□□□□ -0.37
SMARCA4-213ENST00000587988 MAP3K9P80192 1104 aa12.73□□□□□ -0.37
SMARCA4-213ENST00000587988 HTRA3P83110 453 aa12.73□□□□□ -0.37
SMARCA4-213ENST00000587988 NECTIN1Q15223 517 aa12.73□□□□□ -0.37
SMARCA4-213ENST00000587988 IMMTQ16891 758 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-213ENST00000587988 LDLRAD1Q5T700 205 aa12.73□□□□□ -0.37
SMARCA4-213ENST00000587988 SAPCD2Q86UD0 394 aa12.73□□□□□ -0.37
SMARCA4-213ENST00000587988 NKX2-3Q8TAU0 364 aa12.73□□□□□ -0.37
SMARCA4-213ENST00000587988 USP26Q9BXU7 913 aa12.73□□□□□ -0.37
SMARCA4-213ENST00000587988 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-213ENST00000587988 SWAP70Q9UH65 585 aa12.73□□□□□ -0.37
SMARCA4-213ENST00000587988 CTNNA3Q9UI47 895 aa12.73□□□□□ -0.37
SMARCA4-213ENST00000587988 TLL2Q9Y6L7 1015 aa12.73□□□□□ -0.37
SMARCA4-213ENST00000587988 MYH8P13535 1937 aa12.72□□□□□ -0.37
SMARCA4-213ENST00000587988 SLC27A2O14975 620 aa12.72□□□□□ -0.37
SMARCA4-213ENST00000587988 REC8O95072 547 aa12.72□□□□□ -0.37
SMARCA4-213ENST00000587988 GDF11O95390 407 aa12.72□□□□□ -0.37
SMARCA4-213ENST00000587988 RASA1P20936 1047 aa12.72□□□□□ -0.37
SMARCA4-213ENST00000587988 CAP2P40123 477 aa12.72□□□□□ -0.37
SMARCA4-213ENST00000587988 HUNKP57058 714 aa12.72□□□□□ -0.37
SMARCA4-213ENST00000587988 VGLL4Q14135 290 aa12.72□□□□□ -0.37
SMARCA4-213ENST00000587988 CERKLQ49MI3 558 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-213ENST00000587988 ABT1Q9ULW3 272 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-213ENST00000587988 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.72□□□□□ -0.37
SMARCA4-213ENST00000587988 CTNND1O60716 968 aaKnown RBP12.71□□□□□ -0.37
SMARCA4-213ENST00000587988 SLC3A2P08195 630 aaKnown RBP12.71□□□□□ -0.37
SMARCA4-213ENST00000587988 FGRP09769 529 aa12.71□□□□□ -0.37
SMARCA4-213ENST00000587988 AKR1B1P15121 316 aa12.71□□□□□ -0.37
SMARCA4-213ENST00000587988 PDE4BQ07343 736 aa12.71□□□□□ -0.37
SMARCA4-213ENST00000587988 AKNAD1Q5T1N1 836 aa12.71□□□□□ -0.37
SMARCA4-213ENST00000587988 CREB3L3Q68CJ9 461 aa12.71□□□□□ -0.37
SMARCA4-213ENST00000587988 STOX1Q6ZVD7 989 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms