RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 OS9Q13438 667 aaPredicted RBP17.41■□□□□ 0.38
ERCC1-205ENST00000587888 ZKSCAN2Q63HK3 967 aa17.41■□□□□ 0.38
ERCC1-205ENST00000587888 UNC93B1Q9H1C4 597 aa17.41■□□□□ 0.38
ERCC1-205ENST00000587888 TAOK2Q9UL54 1235 aa17.41■□□□□ 0.38
ERCC1-205ENST00000587888 MGAMO43451 1857 aa17.4■□□□□ 0.38
ERCC1-205ENST00000587888 DOCK1Q14185 1865 aa17.4■□□□□ 0.38
ERCC1-205ENST00000587888 ELNP15502 786 aa17.4■□□□□ 0.38
ERCC1-205ENST00000587888 TTC39AQ5SRH9 613 aa17.4■□□□□ 0.38
ERCC1-205ENST00000587888 SLAIN1Q8ND83 568 aa17.4■□□□□ 0.38
ERCC1-205ENST00000587888 SURF6O75683 361 aaKnown RBP17.39■□□□□ 0.37
ERCC1-205ENST00000587888 CAP2P40123 477 aa17.39■□□□□ 0.37
ERCC1-205ENST00000587888 ATP8B2P98198 1209 aa17.39■□□□□ 0.37
ERCC1-205ENST00000587888 RRP1BQ14684 758 aaKnown RBP17.39■□□□□ 0.37
ERCC1-205ENST00000587888 CCDC158Q5M9N0 1113 aa17.39■□□□□ 0.37
ERCC1-205ENST00000587888 NAA16Q6N069 864 aaPredicted RBP17.39■□□□□ 0.37
ERCC1-205ENST00000587888 ZNF280CQ8ND82 737 aa17.39■□□□□ 0.37
ERCC1-205ENST00000587888 DBNDD2Q9BQY9 259 aa17.39■□□□□ 0.37
ERCC1-205ENST00000587888 AATFQ9NY61 560 aaKnown RBP eCLIP17.39■□□□□ 0.37
ERCC1-205ENST00000587888 PHIPQ8WWQ0 1821 aa17.39■□□□□ 0.37
ERCC1-205ENST00000587888 USP17L5A8MUK1 530 aa17.38■□□□□ 0.37
ERCC1-205ENST00000587888 BAG3O95817 575 aa17.38■□□□□ 0.37
ERCC1-205ENST00000587888 HMGCS2P54868 508 aa17.38■□□□□ 0.37
ERCC1-205ENST00000587888 POLA2Q14181 598 aa17.38■□□□□ 0.37
ERCC1-205ENST00000587888 TNNI3KQ59H18 835 aa17.38■□□□□ 0.37
ERCC1-205ENST00000587888 U2AF1L4Q8WU68 220 aaKnown RBP17.38■□□□□ 0.37
ERCC1-205ENST00000587888 TGFBRAP1Q8WUH2 860 aa17.38■□□□□ 0.37
ERCC1-205ENST00000587888 COA7Q96BR5 231 aa17.38■□□□□ 0.37
ERCC1-205ENST00000587888 C1orf115Q9H7X2 142 aa17.38■□□□□ 0.37
ERCC1-205ENST00000587888 PNMA3Q9UL41 463 aa17.38■□□□□ 0.37
ERCC1-205ENST00000587888 FPGT-TNNI3KV9GXZ4 949 aa17.38■□□□□ 0.37
ERCC1-205ENST00000587888 SGPL1O95470 568 aa17.37■□□□□ 0.37
ERCC1-205ENST00000587888 TFRCP02786 760 aaKnown RBP17.37■□□□□ 0.37
ERCC1-205ENST00000587888 INHAP05111 366 aa17.37■□□□□ 0.37
ERCC1-205ENST00000587888 FXR1P51114 621 aaKnown RBP eCLIP17.37■□□□□ 0.37
ERCC1-205ENST00000587888 PROCA1Q8NCQ7 364 aaPredicted RBP17.37■□□□□ 0.37
ERCC1-205ENST00000587888 PI4KBQ9UBF8 816 aa17.37■□□□□ 0.37
ERCC1-205ENST00000587888 PTPRFP10586 1907 aa17.37■□□□□ 0.37
ERCC1-205ENST00000587888 MKI67P46013 3256 aaKnown RBP17.36■□□□□ 0.37
ERCC1-205ENST00000587888 CYP2E1P05181 493 aaPredicted RBP17.36■□□□□ 0.37
ERCC1-205ENST00000587888 MAPKAPK5Q8IW41 473 aa17.36■□□□□ 0.37
ERCC1-205ENST00000587888 SSH3Q8TE77 659 aa17.36■□□□□ 0.37
ERCC1-205ENST00000587888 PXYLP1Q8TE99 480 aa17.36■□□□□ 0.37
ERCC1-205ENST00000587888 HTATIP2Q9BUP3 242 aa17.36■□□□□ 0.37
ERCC1-205ENST00000587888 TRIM34Q9BYJ4 488 aa17.36■□□□□ 0.37
ERCC1-205ENST00000587888 AS3MTQ9HBK9 375 aa17.36■□□□□ 0.37
ERCC1-205ENST00000587888 GPR108Q9NPR9 543 aa17.36■□□□□ 0.37
ERCC1-205ENST00000587888 HERC5Q9UII4 1024 aaKnown RBP17.36■□□□□ 0.37
ERCC1-205ENST00000587888 PLCG2P16885 1265 aa17.35■□□□□ 0.37
ERCC1-205ENST00000587888 ZAP70P43403 619 aa17.35■□□□□ 0.37
ERCC1-205ENST00000587888 PABPC4Q13310 644 aaKnown RBP eCLIP17.35■□□□□ 0.374e-6■■□□□ 11.7
ERCC1-205ENST00000587888 IRF5Q13568 498 aa17.35■□□□□ 0.37
ERCC1-205ENST00000587888 CHRDL2Q6WN34 429 aa17.35■□□□□ 0.37
ERCC1-205ENST00000587888 ADGRA1Q86SQ6 560 aa17.35■□□□□ 0.37
ERCC1-205ENST00000587888 DEFB118Q96PH6 123 aa17.35■□□□□ 0.37
ERCC1-205ENST00000587888 TBC1D2Q9BYX2 928 aa17.35■□□□□ 0.37
ERCC1-205ENST00000587888 CCDC8Q9H0W5 538 aaPredicted RBP17.35■□□□□ 0.37
ERCC1-205ENST00000587888 ASCC2Q9H1I8 757 aaPredicted RBP17.35■□□□□ 0.37
ERCC1-205ENST00000587888 DHX36Q9H2U1 1008 aaKnown RBP17.35■□□□□ 0.37
ERCC1-205ENST00000587888 PALD1Q9ULE6 856 aa17.35■□□□□ 0.37
ERCC1-205ENST00000587888 FARP2O94887 1054 aaPredicted RBP17.34■□□□□ 0.37
ERCC1-205ENST00000587888 COL2A1P02458 1487 aaPredicted RBP17.34■□□□□ 0.37
ERCC1-205ENST00000587888 GCLCP48506 637 aaPredicted RBP17.34■□□□□ 0.37
ERCC1-205ENST00000587888 JAG1P78504 1218 aa17.34■□□□□ 0.37
ERCC1-205ENST00000587888 FAM110CQ1W6H9 321 aa17.34■□□□□ 0.37
ERCC1-205ENST00000587888 UBE2Q1Q7Z7E8 422 aa17.34■□□□□ 0.37
ERCC1-205ENST00000587888 FOXP4Q8IVH2 680 aaPredicted RBP17.34■□□□□ 0.37
ERCC1-205ENST00000587888 ITPRIPQ8IWB1 547 aa17.34■□□□□ 0.37
ERCC1-205ENST00000587888 FTSJ3Q8IY81 847 aaKnown RBP17.34■□□□□ 0.37
ERCC1-205ENST00000587888 CRACR2BQ8N4Y2 399 aaPredicted RBP17.34■□□□□ 0.37
ERCC1-205ENST00000587888 PIH1D3Q9NQM4 214 aaKnown RBP17.34■□□□□ 0.37
ERCC1-205ENST00000587888 SAP30BPQ9UHR5 308 aaKnown RBP17.34■□□□□ 0.37
ERCC1-205ENST00000587888 PPP4CP60510 307 aa17.33■□□□□ 0.36
ERCC1-205ENST00000587888 HNRNPUQ00839 825 aaKnown RBP eCLIP17.33■□□□□ 0.36
ERCC1-205ENST00000587888 MTMR2Q13614 643 aa17.33■□□□□ 0.36
ERCC1-205ENST00000587888 SH3D19Q5HYK7 790 aa17.33■□□□□ 0.36
ERCC1-205ENST00000587888 ATAD5Q96QE3 1844 aa17.33■□□□□ 0.36
ERCC1-205ENST00000587888 FLT1P17948 1338 aa17.32■□□□□ 0.36
ERCC1-205ENST00000587888 ZBTB7BO15156 539 aaPredicted RBP17.32■□□□□ 0.36
ERCC1-205ENST00000587888 GDF11O95390 407 aa17.32■□□□□ 0.36
ERCC1-205ENST00000587888 CYP7A1P22680 504 aa17.32■□□□□ 0.36
ERCC1-205ENST00000587888 DYNLL1P63167 89 aaKnown RBP17.32■□□□□ 0.36
ERCC1-205ENST00000587888 SHROOM1Q2M3G4 852 aaPredicted RBP17.32■□□□□ 0.36
ERCC1-205ENST00000587888 WDR18Q9BV38 432 aa17.32■□□□□ 0.36
ERCC1-205ENST00000587888 TLR7Q9NYK1 1049 aaKnown RBP17.32■□□□□ 0.36
ERCC1-205ENST00000587888 TMOD4Q9NZQ9 345 aa17.32■□□□□ 0.36
ERCC1-205ENST00000587888 NR2E3Q9Y5X4 410 aa17.32■□□□□ 0.36
ERCC1-205ENST00000587888 BRCA2P51587 3418 aa17.32■□□□□ 0.36
ERCC1-205ENST00000587888 PEX10O60683 326 aa17.31■□□□□ 0.36
ERCC1-205ENST00000587888 ASNSP08243 561 aa17.31■□□□□ 0.36
ERCC1-205ENST00000587888 RLBP1P12271 317 aa17.31■□□□□ 0.36
ERCC1-205ENST00000587888 BACE1P56817 501 aa17.31■□□□□ 0.36
ERCC1-205ENST00000587888 IRX3P78415 501 aaPredicted RBP17.31■□□□□ 0.36
ERCC1-205ENST00000587888 EAF2Q96CJ1 260 aaPredicted RBP17.31■□□□□ 0.36
ERCC1-205ENST00000587888 ZNF512BQ96KM6 892 aaPredicted RBP17.31■□□□□ 0.36
ERCC1-205ENST00000587888 P2RX7Q99572 595 aaKnown RBP17.31■□□□□ 0.36
ERCC1-205ENST00000587888 DNAJC18Q9H819 358 aa17.31■□□□□ 0.36
ERCC1-205ENST00000587888 RBM27Q9P2N5 1060 aaKnown RBP17.31■□□□□ 0.36
ERCC1-205ENST00000587888 DBNLQ9UJU6 430 aaKnown RBP17.31■□□□□ 0.36
ERCC1-205ENST00000587888 NOP58Q9Y2X3 529 aaKnown RBP17.31■□□□□ 0.36
ERCC1-205ENST00000587888 NDUFB9Q9Y6M9 179 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms