RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 DDX4Q9NQI0 724 aaKnown RBP10.67□□□□□ -0.7
SDF2-204ENST00000587338 GNL3LQ9NVN8 582 aaKnown RBP10.67□□□□□ -0.7
SDF2-204ENST00000587338 PHIPQ8WWQ0 1821 aa10.67□□□□□ -0.7
SDF2-204ENST00000587338 SALL1Q9NSC2 1324 aa10.66□□□□□ -0.7
SDF2-204ENST00000587338 CYP2B6P20813 491 aa10.66□□□□□ -0.7
SDF2-204ENST00000587338 HMGCS2P54868 508 aa10.66□□□□□ -0.7
SDF2-204ENST00000587338 SPP2Q13103 211 aa10.66□□□□□ -0.7
SDF2-204ENST00000587338 PABPC4Q13310 644 aaKnown RBP eCLIP10.66□□□□□ -0.7
SDF2-204ENST00000587338 ATP2B3Q16720 1220 aa10.66□□□□□ -0.7
SDF2-204ENST00000587338 ASCC2Q9H1I8 757 aaPredicted RBP10.66□□□□□ -0.7
SDF2-204ENST00000587338 RNF39Q9H2S5 420 aa10.66□□□□□ -0.7
SDF2-204ENST00000587338 GJD2Q9UKL4 321 aa10.66□□□□□ -0.7
SDF2-204ENST00000587338 GAKO14976 1311 aa10.65□□□□□ -0.7
SDF2-204ENST00000587338 BTDP43251 543 aa10.65□□□□□ -0.7
SDF2-204ENST00000587338 PHKA1P46020 1223 aa10.65□□□□□ -0.7
SDF2-204ENST00000587338 MAP3K10Q02779 954 aa10.65□□□□□ -0.7
SDF2-204ENST00000587338 LRRC26Q2I0M4 334 aa10.65□□□□□ -0.7
SDF2-204ENST00000587338 NCBP3Q53F19 620 aaKnown RBP10.65□□□□□ -0.7
SDF2-204ENST00000587338 SIL1Q9H173 461 aa10.65□□□□□ -0.7
SDF2-204ENST00000587338 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.65□□□□□ -0.7
SDF2-204ENST00000587338 DENND2AQ9ULE3 1009 aa10.65□□□□□ -0.7
SDF2-204ENST00000587338 LOC285556D6RIA3 1793 aa10.65□□□□□ -0.71
SDF2-204ENST00000587338 MYH2Q9UKX2 1941 aa10.64□□□□□ -0.71
SDF2-204ENST00000587338 POTEB2H3BUK9 544 aa10.64□□□□□ -0.71
SDF2-204ENST00000587338 SEMA3EO15041 775 aa10.64□□□□□ -0.71
SDF2-204ENST00000587338 COL6A1P12109 1028 aa10.64□□□□□ -0.71
SDF2-204ENST00000587338 ZKSCAN1P17029 563 aaPredicted RBP10.64□□□□□ -0.71
SDF2-204ENST00000587338 RFX5P48382 616 aaPredicted RBP10.64□□□□□ -0.71
SDF2-204ENST00000587338 IRX3P78415 501 aaPredicted RBP10.64□□□□□ -0.71
SDF2-204ENST00000587338 MAP3K21Q5TCX8 1036 aa10.64□□□□□ -0.71
SDF2-204ENST00000587338 ATG9AQ7Z3C6 839 aa10.64□□□□□ -0.71
SDF2-204ENST00000587338 SLF2Q8IX21 1173 aa10.64□□□□□ -0.71
SDF2-204ENST00000587338 ZGPATQ8N5A5 531 aaKnown RBP10.64□□□□□ -0.71
SDF2-204ENST00000587338 ZNF280CQ8ND82 737 aa10.64□□□□□ -0.71
SDF2-204ENST00000587338 SOCS4Q8WXH5 440 aa10.64□□□□□ -0.71
SDF2-204ENST00000587338 NUDT12Q9BQG2 462 aa10.64□□□□□ -0.71
SDF2-204ENST00000587338 ABCF2Q9UG63 623 aa10.64□□□□□ -0.71
SDF2-204ENST00000587338 PEX10O60683 326 aa10.63□□□□□ -0.71
SDF2-204ENST00000587338 CACNB2Q08289 660 aaPredicted RBP10.63□□□□□ -0.71
SDF2-204ENST00000587338 PDE3AQ14432 1141 aa10.63□□□□□ -0.71
SDF2-204ENST00000587338 ZNF697Q5TEC3 545 aa10.63□□□□□ -0.71
SDF2-204ENST00000587338 FAM109BQ6ICB4 259 aaPredicted RBP10.63□□□□□ -0.71
SDF2-204ENST00000587338 LBHD1Q9BQE6 289 aaPredicted RBP10.63□□□□□ -0.71
SDF2-204ENST00000587338 USP44Q9H0E7 712 aa10.63□□□□□ -0.71
SDF2-204ENST00000587338 OSBPL5Q9H0X9 879 aaPredicted RBP10.63□□□□□ -0.71
SDF2-204ENST00000587338 CEP126Q9P2H0 1117 aa10.63□□□□□ -0.71
SDF2-204ENST00000587338 MORF4L1Q9UBU8 362 aa10.63□□□□□ -0.71
SDF2-204ENST00000587338 PLXNB2O15031 1838 aa10.63□□□□□ -0.71
SDF2-204ENST00000587338 COL2A1P02458 1487 aaPredicted RBP10.62□□□□□ -0.71
SDF2-204ENST00000587338 MROH7-TTC4A0A0A0MT08 1334 aa10.62□□□□□ -0.71
SDF2-204ENST00000587338 CDH23Q9H251 3354 aa10.62□□□□□ -0.71
SDF2-204ENST00000587338 USP17L5A8MUK1 530 aa10.62□□□□□ -0.71
SDF2-204ENST00000587338 TBC1D12O60347 775 aa10.62□□□□□ -0.71
SDF2-204ENST00000587338 XRCC5P13010 732 aaKnown RBP10.62□□□□□ -0.71
SDF2-204ENST00000587338 CCND3P30281 292 aaPredicted RBP10.62□□□□□ -0.71
SDF2-204ENST00000587338 ADORA1P30542 326 aa10.62□□□□□ -0.71
SDF2-204ENST00000587338 MTMR2Q13614 643 aa10.62□□□□□ -0.71
SDF2-204ENST00000587338 RASGRF1Q13972 1273 aa10.62□□□□□ -0.71
SDF2-204ENST00000587338 GPRC5AQ8NFJ5 357 aa10.62□□□□□ -0.71
SDF2-204ENST00000587338 MAFAQ8NHW3 353 aaPredicted RBP10.62□□□□□ -0.71
SDF2-204ENST00000587338 TBC1D2Q9BYX2 928 aa10.62□□□□□ -0.71
SDF2-204ENST00000587338 CAP2P40123 477 aa10.61□□□□□ -0.71
SDF2-204ENST00000587338 RHBDL3P58872 404 aa10.61□□□□□ -0.71
SDF2-204ENST00000587338 HNRNPUQ00839 825 aaKnown RBP eCLIP10.61□□□□□ -0.71
SDF2-204ENST00000587338 CCL14Q16627 93 aa10.61□□□□□ -0.71
SDF2-204ENST00000587338 SPTY2D1Q68D10 685 aaPredicted RBP10.61□□□□□ -0.71
SDF2-204ENST00000587338 CCDC102BQ68D86 513 aa10.61□□□□□ -0.71
SDF2-204ENST00000587338 LHX8Q68G74 356 aa10.61□□□□□ -0.71
SDF2-204ENST00000587338 CCAR1Q8IX12 1150 aaKnown RBP10.61□□□□□ -0.71
SDF2-204ENST00000587338 TRMT44Q8IYL2 757 aaKnown RBP10.61□□□□□ -0.71
SDF2-204ENST00000587338 FAM163AQ96GL9 167 aaPredicted RBP10.61□□□□□ -0.71
SDF2-204ENST00000587338 CDX2Q99626 313 aaPredicted RBP10.61□□□□□ -0.71
SDF2-204ENST00000587338 AS3MTQ9HBK9 375 aa10.61□□□□□ -0.71
SDF2-204ENST00000587338 TXNRD2Q9NNW7 524 aa10.61□□□□□ -0.71
SDF2-204ENST00000587338 PRDM6Q9NQX0 595 aa10.61□□□□□ -0.71
SDF2-204ENST00000587338 TMOD4Q9NZQ9 345 aa10.61□□□□□ -0.71
SDF2-204ENST00000587338 MUC3AQ02505 3323 aa10.61□□□□□ -0.71
SDF2-204ENST00000587338 GPR75-ASB3A0A0A6YYF3 556 aa10.6□□□□□ -0.71
SDF2-204ENST00000587338 CIAO1O76071 339 aa10.6□□□□□ -0.71
SDF2-204ENST00000587338 MAPK4P31152 587 aa10.6□□□□□ -0.71
SDF2-204ENST00000587338 RGS2P41220 211 aa10.6□□□□□ -0.71
SDF2-204ENST00000587338 ATN1P54259 1190 aaPredicted RBP10.6□□□□□ -0.71
SDF2-204ENST00000587338 HERVK_113P62684 666 aa10.6□□□□□ -0.71
SDF2-204ENST00000587338 MECOMQ03112 1051 aa10.6□□□□□ -0.71
SDF2-204ENST00000587338 RRP1BQ14684 758 aaKnown RBP10.6□□□□□ -0.71
SDF2-204ENST00000587338 SH3D19Q5HYK7 790 aa10.6□□□□□ -0.71
SDF2-204ENST00000587338 MRPL50Q8N5N7 158 aaKnown RBP10.6□□□□□ -0.71
SDF2-204ENST00000587338 P2RX7Q99572 595 aaKnown RBP10.6□□□□□ -0.71
SDF2-204ENST00000587338 APBA2Q99767 749 aa10.6□□□□□ -0.71
SDF2-204ENST00000587338 PAGR1Q9BTK6 254 aa10.6□□□□□ -0.71
SDF2-204ENST00000587338 SENP6Q9GZR1 1112 aaPredicted RBP10.6□□□□□ -0.71
SDF2-204ENST00000587338 CWC22Q9HCG8 908 aaKnown RBP10.6□□□□□ -0.71
SDF2-204ENST00000587338 PRKAG2Q9UGJ0 569 aa10.6□□□□□ -0.71
SDF2-204ENST00000587338 ATAD5Q96QE3 1844 aa10.6□□□□□ -0.71
SDF2-204ENST00000587338 PTPRCP08575 1304 aa10.59□□□□□ -0.71
SDF2-204ENST00000587338 ERICH6Q7L0X2 663 aa10.59□□□□□ -0.71
SDF2-204ENST00000587338 GPR142Q7Z601 462 aa10.59□□□□□ -0.71
SDF2-204ENST00000587338 PORCNQ9H237 461 aa10.59□□□□□ -0.71
SDF2-204ENST00000587338 FBXO3Q9UK99 471 aa10.59□□□□□ -0.71
SDF2-204ENST00000587338 PDS5AQ29RF7 1337 aaKnown RBP10.58□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms