RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 GJB1P08034 283 aa19.28■□□□□ 0.68
VAT1-205ENST00000587173 GJA8P48165 433 aa19.28■□□□□ 0.68
VAT1-205ENST00000587173 SPP2Q13103 211 aa19.28■□□□□ 0.68
VAT1-205ENST00000587173 TREML2Q5T2D2 321 aa19.28■□□□□ 0.68
VAT1-205ENST00000587173 NAA16Q6N069 864 aaPredicted RBP19.28■□□□□ 0.68
VAT1-205ENST00000587173 FTSJ3Q8IY81 847 aaKnown RBP19.28■□□□□ 0.68
VAT1-205ENST00000587173 SH3RF3Q8TEJ3 882 aaPredicted RBP19.28■□□□□ 0.68
VAT1-205ENST00000587173 DBNDD2Q9BQY9 259 aa19.28■□□□□ 0.68
VAT1-205ENST00000587173 GPR108Q9NPR9 543 aa19.28■□□□□ 0.68
VAT1-205ENST00000587173 TNPO2O14787 897 aaKnown RBP19.27■□□□□ 0.68
VAT1-205ENST00000587173 CAP2P40123 477 aa19.27■□□□□ 0.68
VAT1-205ENST00000587173 FLT3LGP49771 235 aa19.27■□□□□ 0.68
VAT1-205ENST00000587173 CCDC158Q5M9N0 1113 aa19.27■□□□□ 0.68
VAT1-205ENST00000587173 ANKRD13CQ8N6S4 541 aa19.27■□□□□ 0.68
VAT1-205ENST00000587173 C1orf115Q9H7X2 142 aa19.27■□□□□ 0.68
VAT1-205ENST00000587173 AATFQ9NY61 560 aaKnown RBP eCLIP19.27■□□□□ 0.68
VAT1-205ENST00000587173 PNMA3Q9UL41 463 aa19.27■□□□□ 0.68
VAT1-205ENST00000587173 H0YGN5 161 aa19.26■□□□□ 0.67
VAT1-205ENST00000587173 ADCY3O60266 1144 aa19.26■□□□□ 0.67
VAT1-205ENST00000587173 SURF6O75683 361 aaKnown RBP19.26■□□□□ 0.67
VAT1-205ENST00000587173 BAG3O95817 575 aa19.26■□□□□ 0.67
VAT1-205ENST00000587173 ATP8B2P98198 1209 aa19.26■□□□□ 0.67
VAT1-205ENST00000587173 RRP1BQ14684 758 aaKnown RBP19.26■□□□□ 0.67
VAT1-205ENST00000587173 PROCA1Q8NCQ7 364 aaPredicted RBP19.26■□□□□ 0.67
VAT1-205ENST00000587173 ZNF280CQ8ND82 737 aa19.26■□□□□ 0.67
VAT1-205ENST00000587173 SSH3Q8TE77 659 aa19.26■□□□□ 0.67
VAT1-205ENST00000587173 TBC1D2Q9BYX2 928 aa19.26■□□□□ 0.67
VAT1-205ENST00000587173 UNC93B1Q9H1C4 597 aa19.26■□□□□ 0.67
VAT1-205ENST00000587173 HERC5Q9UII4 1024 aaKnown RBP19.26■□□□□ 0.67
VAT1-205ENST00000587173 COLQQ9Y215 455 aaPredicted RBP19.26■□□□□ 0.67
VAT1-205ENST00000587173 USP17L5A8MUK1 530 aa19.25■□□□□ 0.67
VAT1-205ENST00000587173 HMGCS2P54868 508 aa19.25■□□□□ 0.67
VAT1-205ENST00000587173 MIER1Q8N108 512 aa19.25■□□□□ 0.67
VAT1-205ENST00000587173 PHIPQ8WWQ0 1821 aa19.25■□□□□ 0.67
VAT1-205ENST00000587173 INHAP05111 366 aa19.24■□□□□ 0.67
VAT1-205ENST00000587173 CYP2E1P05181 493 aaPredicted RBP19.24■□□□□ 0.67
VAT1-205ENST00000587173 ELNP15502 786 aa19.24■□□□□ 0.67
VAT1-205ENST00000587173 PLCG2P16885 1265 aa19.24■□□□□ 0.67
VAT1-205ENST00000587173 IRF5Q13568 498 aa19.24■□□□□ 0.67
VAT1-205ENST00000587173 FAM110CQ1W6H9 321 aa19.24■□□□□ 0.67
VAT1-205ENST00000587173 U2AF1L4Q8WU68 220 aaKnown RBP19.24■□□□□ 0.67
VAT1-205ENST00000587173 DPF3Q92784 378 aa19.24■□□□□ 0.67
VAT1-205ENST00000587173 COA7Q96BR5 231 aa19.24■□□□□ 0.67
VAT1-205ENST00000587173 DHX36Q9H2U1 1008 aaKnown RBP19.24■□□□□ 0.67
VAT1-205ENST00000587173 PI4KBQ9UBF8 816 aa19.24■□□□□ 0.67
VAT1-205ENST00000587173 ZAP70P43403 619 aa19.23■□□□□ 0.67
VAT1-205ENST00000587173 FXR1P51114 621 aaKnown RBP eCLIP19.23■□□□□ 0.67
VAT1-205ENST00000587173 PABPC4Q13310 644 aaKnown RBP eCLIP19.23■□□□□ 0.672e-8■■■■■ 28.2
VAT1-205ENST00000587173 DIEXFQ68CQ4 756 aaKnown RBP19.23■□□□□ 0.67
VAT1-205ENST00000587173 UBE2Q1Q7Z7E8 422 aa19.23■□□□□ 0.67
VAT1-205ENST00000587173 ADGRA1Q86SQ6 560 aa19.23■□□□□ 0.67
VAT1-205ENST00000587173 MAPKAPK5Q8IW41 473 aa19.23■□□□□ 0.67
VAT1-205ENST00000587173 ITPRIPQ8IWB1 547 aa19.23■□□□□ 0.67
VAT1-205ENST00000587173 PXYLP1Q8TE99 480 aa19.23■□□□□ 0.67
VAT1-205ENST00000587173 TGFBRAP1Q8WUH2 860 aa19.23■□□□□ 0.67
VAT1-205ENST00000587173 AS3MTQ9HBK9 375 aa19.23■□□□□ 0.67
VAT1-205ENST00000587173 TAOK2Q9UL54 1235 aa19.23■□□□□ 0.67
VAT1-205ENST00000587173 PTPRFP10586 1907 aa19.23■□□□□ 0.67
VAT1-205ENST00000587173 FLT1P17948 1338 aa19.23■□□□□ 0.67
VAT1-205ENST00000587173 GCLCP48506 637 aaPredicted RBP19.22■□□□□ 0.67
VAT1-205ENST00000587173 PPP4CP60510 307 aa19.22■□□□□ 0.67
VAT1-205ENST00000587173 SH3D19Q5HYK7 790 aa19.22■□□□□ 0.67
VAT1-205ENST00000587173 ZNF512BQ96KM6 892 aaPredicted RBP19.22■□□□□ 0.67
VAT1-205ENST00000587173 HTATIP2Q9BUP3 242 aa19.22■□□□□ 0.67
VAT1-205ENST00000587173 PIH1D3Q9NQM4 214 aaKnown RBP19.22■□□□□ 0.67
VAT1-205ENST00000587173 NOP58Q9Y2X3 529 aaKnown RBP19.22■□□□□ 0.67
VAT1-205ENST00000587173 FARP2O94887 1054 aaPredicted RBP19.21■□□□□ 0.67
VAT1-205ENST00000587173 SGPL1O95470 568 aa19.21■□□□□ 0.67
VAT1-205ENST00000587173 TRIM34Q9BYJ4 488 aa19.21■□□□□ 0.67
VAT1-205ENST00000587173 ASCC2Q9H1I8 757 aaPredicted RBP19.21■□□□□ 0.67
VAT1-205ENST00000587173 DNAJC18Q9H819 358 aa19.21■□□□□ 0.67
VAT1-205ENST00000587173 TLR7Q9NYK1 1049 aaKnown RBP19.21■□□□□ 0.67
VAT1-205ENST00000587173 DBNLQ9UJU6 430 aaKnown RBP19.21■□□□□ 0.67
VAT1-205ENST00000587173 MAST2Q6P0Q8 1798 aa19.21■□□□□ 0.67
VAT1-205ENST00000587173 MGAMO43451 1857 aa19.2■□□□□ 0.66
VAT1-205ENST00000587173 ZBTB7BO15156 539 aaPredicted RBP19.2■□□□□ 0.66
VAT1-205ENST00000587173 IGSF3O75054 1194 aa19.2■□□□□ 0.66
VAT1-205ENST00000587173 RLBP1P12271 317 aa19.2■□□□□ 0.66
VAT1-205ENST00000587173 MTMR2Q13614 643 aa19.2■□□□□ 0.66
VAT1-205ENST00000587173 CRACR2BQ8N4Y2 399 aaPredicted RBP19.2■□□□□ 0.66
VAT1-205ENST00000587173 WDR18Q9BV38 432 aa19.2■□□□□ 0.66
VAT1-205ENST00000587173 CCDC8Q9H0W5 538 aaPredicted RBP19.2■□□□□ 0.66
VAT1-205ENST00000587173 PALD1Q9ULE6 856 aa19.2■□□□□ 0.66
VAT1-205ENST00000587173 LOC285556D6RIA3 1793 aa19.19■□□□□ 0.66
VAT1-205ENST00000587173 ASNSP08243 561 aa19.19■□□□□ 0.66
VAT1-205ENST00000587173 JAG1P78504 1218 aa19.19■□□□□ 0.66
VAT1-205ENST00000587173 CHRDL2Q6WN34 429 aa19.19■□□□□ 0.66
VAT1-205ENST00000587173 METTL16Q86W50 562 aaKnown RBP19.19■□□□□ 0.66
VAT1-205ENST00000587173 FOXP4Q8IVH2 680 aaPredicted RBP19.19■□□□□ 0.66
VAT1-205ENST00000587173 DEFB118Q96PH6 123 aa19.19■□□□□ 0.66
VAT1-205ENST00000587173 TMOD4Q9NZQ9 345 aa19.19■□□□□ 0.66
VAT1-205ENST00000587173 SAP30BPQ9UHR5 308 aaKnown RBP19.19■□□□□ 0.66
VAT1-205ENST00000587173 GDF11O95390 407 aa19.18■□□□□ 0.66
VAT1-205ENST00000587173 TFRCP02786 760 aaKnown RBP19.18■□□□□ 0.66
VAT1-205ENST00000587173 HLA-DOAP06340 250 aa19.18■□□□□ 0.66
VAT1-205ENST00000587173 CYP7A1P22680 504 aa19.18■□□□□ 0.66
VAT1-205ENST00000587173 BACE1P56817 501 aa19.18■□□□□ 0.66
VAT1-205ENST00000587173 DYNLL1P63167 89 aaKnown RBP19.18■□□□□ 0.66
VAT1-205ENST00000587173 IRX3P78415 501 aaPredicted RBP19.18■□□□□ 0.66
VAT1-205ENST00000587173 SHROOM1Q2M3G4 852 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms