RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 TNFAIP1Q13829 316 aa21.77■■□□□ 1.08
RETREG3-205ENST00000586870 SPDYE2Q495Y8 402 aa21.77■■□□□ 1.08
RETREG3-205ENST00000586870 APOBEC3HQ6NTF7 200 aaKnown RBP21.77■■□□□ 1.08
RETREG3-205ENST00000586870 NSUN4Q96CB9 384 aaKnown RBP21.77■■□□□ 1.08
RETREG3-205ENST00000586870 ATP6V1DQ9Y5K8 247 aa21.77■■□□□ 1.08
RETREG3-205ENST00000586870 IGSF3O75054 1194 aa21.77■■□□□ 1.07
RETREG3-205ENST00000586870 CELF2O95319 508 aaKnown RBP21.77■■□□□ 1.07
RETREG3-205ENST00000586870 PDCP20941 246 aa21.77■■□□□ 1.07
RETREG3-205ENST00000586870 TNNI2P48788 182 aa21.77■■□□□ 1.07
RETREG3-205ENST00000586870 FGD1P98174 961 aa21.77■■□□□ 1.07
RETREG3-205ENST00000586870 FMR1Q06787 632 aaKnown RBP eCLIP21.77■■□□□ 1.07
RETREG3-205ENST00000586870 FBXL16Q8N461 479 aa21.77■■□□□ 1.07
RETREG3-205ENST00000586870 USP40Q9NVE5 1235 aa21.77■■□□□ 1.07
RETREG3-205ENST00000586870 ADAMTSL1Q8N6G6 1762 aa21.76■■□□□ 1.07
RETREG3-205ENST00000586870 FSD2A1L4K1 749 aa21.76■■□□□ 1.07
RETREG3-205ENST00000586870 GOLGA6L3A6NEY3 463 aa21.76■■□□□ 1.07
RETREG3-205ENST00000586870 TMEM88BA6NKF7 163 aa21.76■■□□□ 1.07
RETREG3-205ENST00000586870 TCP10L2B9ZVM9 353 aa21.76■■□□□ 1.07
RETREG3-205ENST00000586870 DLK2Q6UY11 383 aa21.76■■□□□ 1.07
RETREG3-205ENST00000586870 GTF3C6Q969F1 213 aa21.76■■□□□ 1.07
RETREG3-205ENST00000586870 DEFB129Q9H1M3 183 aa21.76■■□□□ 1.07
RETREG3-205ENST00000586870 ZNF646O15015 1829 aaPredicted RBP21.75■■□□□ 1.07
RETREG3-205ENST00000586870 F13A1P00488 732 aa21.75■■□□□ 1.07
RETREG3-205ENST00000586870 NF2P35240 595 aa21.75■■□□□ 1.07
RETREG3-205ENST00000586870 BRF1Q92994 677 aa21.75■■□□□ 1.07
RETREG3-205ENST00000586870 CHMP4CQ96CF2 233 aa21.75■■□□□ 1.07
RETREG3-205ENST00000586870 CDCA5Q96FF9 252 aa21.75■■□□□ 1.07
RETREG3-205ENST00000586870 FAM163AQ96GL9 167 aaPredicted RBP21.75■■□□□ 1.07
RETREG3-205ENST00000586870 MROH7-TTC4A0A0A0MT08 1334 aa21.74■■□□□ 1.07
RETREG3-205ENST00000586870 ZNF213O14771 459 aa21.74■■□□□ 1.07
RETREG3-205ENST00000586870 BAG3O95817 575 aa21.74■■□□□ 1.07
RETREG3-205ENST00000586870 BTDP43251 543 aa21.74■■□□□ 1.07
RETREG3-205ENST00000586870 PRAMEF18Q5VWM3 479 aa21.74■■□□□ 1.07
RETREG3-205ENST00000586870 MTMR6Q9Y217 621 aa21.74■■□□□ 1.07
RETREG3-205ENST00000586870 MYO5AQ9Y4I1 1855 aaKnown RBP21.74■■□□□ 1.07
RETREG3-205ENST00000586870 PFKFB2O60825 505 aa21.73■■□□□ 1.07
RETREG3-205ENST00000586870 MBD3O95983 291 aa21.73■■□□□ 1.07
RETREG3-205ENST00000586870 CYP7A1P22680 504 aa21.73■■□□□ 1.07
RETREG3-205ENST00000586870 CACNB3P54284 484 aa21.73■■□□□ 1.07
RETREG3-205ENST00000586870 ALX1Q15699 326 aa21.73■■□□□ 1.07
RETREG3-205ENST00000586870 CDC42EP5Q6NZY7 148 aa21.73■■□□□ 1.07
RETREG3-205ENST00000586870 MAGEB6Q8N7X4 407 aa21.73■■□□□ 1.07
RETREG3-205ENST00000586870 STRBPQ96SI9 672 aaKnown RBP21.73■■□□□ 1.07
RETREG3-205ENST00000586870 ABT1Q9ULW3 272 aaKnown RBP21.73■■□□□ 1.07
RETREG3-205ENST00000586870 PPP2R3BQ9Y5P8 575 aa21.73■■□□□ 1.07
RETREG3-205ENST00000586870 CEP350Q5VT06 3117 aa21.73■■□□□ 1.07
RETREG3-205ENST00000586870 GAKO14976 1311 aa21.73■■□□□ 1.07
RETREG3-205ENST00000586870 STK3Q13188 491 aa21.73■■□□□ 1.07
RETREG3-205ENST00000586870 RASA3Q14644 834 aa21.73■■□□□ 1.07
RETREG3-205ENST00000586870 LARP1BQ659C4 914 aaKnown RBP21.73■■□□□ 1.07
RETREG3-205ENST00000586870 C2orf69Q8N8R5 385 aa21.73■■□□□ 1.07
RETREG3-205ENST00000586870 AIDAQ96BJ3 306 aa21.73■■□□□ 1.07
RETREG3-205ENST00000586870 LLPHQ9BRT6 129 aaKnown RBP21.73■■□□□ 1.07
RETREG3-205ENST00000586870 CREBZFQ9NS37 354 aa21.73■■□□□ 1.07
RETREG3-205ENST00000586870 MYH13Q9UKX3 1938 aa21.72■■□□□ 1.07
RETREG3-205ENST00000586870 ZMYM6O95789 1325 aa21.72■■□□□ 1.07
RETREG3-205ENST00000586870 WDR19Q8NEZ3 1342 aa21.72■■□□□ 1.07
RETREG3-205ENST00000586870 GPR75-ASB3A0A0A6YYF3 556 aa21.72■■□□□ 1.07
RETREG3-205ENST00000586870 NCOA7Q8NI08 942 aa21.72■■□□□ 1.07
RETREG3-205ENST00000586870 TTLL12Q14166 644 aaPredicted RBP21.71■■□□□ 1.07
RETREG3-205ENST00000586870 CST9Q5W186 159 aa21.71■■□□□ 1.07
RETREG3-205ENST00000586870 TMED8Q6PL24 325 aaPredicted RBP21.71■■□□□ 1.07
RETREG3-205ENST00000586870 TMEM87AQ8NBN3 555 aa21.71■■□□□ 1.07
RETREG3-205ENST00000586870 ZNF384Q8TF68 577 aa21.71■■□□□ 1.07
RETREG3-205ENST00000586870 ZNF274Q96GC6 653 aaPredicted RBP21.71■■□□□ 1.07
RETREG3-205ENST00000586870 CHAMP1Q96JM3 812 aa21.71■■□□□ 1.07
RETREG3-205ENST00000586870 LRRC2Q9BYS8 371 aa21.71■■□□□ 1.07
RETREG3-205ENST00000586870 PATL2C9JE40 543 aaKnown RBP21.7■■□□□ 1.06
RETREG3-205ENST00000586870 NCLP19338 710 aaKnown RBP21.7■■□□□ 1.06
RETREG3-205ENST00000586870 MCM5P33992 734 aa21.7■■□□□ 1.06
RETREG3-205ENST00000586870 EVCP57679 992 aa21.7■■□□□ 1.06
RETREG3-205ENST00000586870 HAND2P61296 217 aa21.7■■□□□ 1.06
RETREG3-205ENST00000586870 SUPT20HL1Q3ZLR7 823 aa21.7■■□□□ 1.06
RETREG3-205ENST00000586870 MB21D2Q8IYB1 491 aaPredicted RBP21.7■■□□□ 1.06
RETREG3-205ENST00000586870 AATFQ9NY61 560 aaKnown RBP eCLIP21.7■■□□□ 1.06
RETREG3-205ENST00000586870 GNAT2P19087 354 aa21.69■■□□□ 1.06
RETREG3-205ENST00000586870 HTRA3P83110 453 aa21.69■■□□□ 1.06
RETREG3-205ENST00000586870 FKBP1CQ5VVH2 108 aa21.69■■□□□ 1.06
RETREG3-205ENST00000586870 RALYLQ86SE5 291 aaKnown RBP21.69■■□□□ 1.06
RETREG3-205ENST00000586870 GPT2Q8TD30 523 aa21.69■■□□□ 1.06
RETREG3-205ENST00000586870 GBA2Q9HCG7 927 aaPredicted RBP21.69■■□□□ 1.06
RETREG3-205ENST00000586870 APPP05067 770 aa21.69■■□□□ 1.06
RETREG3-205ENST00000586870 PLCG2P16885 1265 aa21.69■■□□□ 1.06
RETREG3-205ENST00000586870 APOBRQ0VD83 1088 aa21.69■■□□□ 1.06
RETREG3-205ENST00000586870 TCP10Q12799 353 aa21.69■■□□□ 1.06
RETREG3-205ENST00000586870 SMARCC2Q8TAQ2 1214 aa21.69■■□□□ 1.06
RETREG3-205ENST00000586870 VPS37CA5D8V6 355 aaPredicted RBP21.68■■□□□ 1.06
RETREG3-205ENST00000586870 MBD4O95243 580 aa21.68■■□□□ 1.06
RETREG3-205ENST00000586870 SCRN1Q12765 414 aa21.68■■□□□ 1.06
RETREG3-205ENST00000586870 TRDNQ13061 729 aa21.68■■□□□ 1.06
RETREG3-205ENST00000586870 FAM83AQ86UY5 434 aa21.68■■□□□ 1.06
RETREG3-205ENST00000586870 MRE11P49959 708 aa21.67■■□□□ 1.06
RETREG3-205ENST00000586870 PICALMQ13492 652 aa21.67■■□□□ 1.06
RETREG3-205ENST00000586870 PRKG1Q13976 671 aa21.67■■□□□ 1.06
RETREG3-205ENST00000586870 CSPP1Q1MSJ5 1256 aa21.67■■□□□ 1.06
RETREG3-205ENST00000586870 PAXIP1Q6ZW49 1069 aaPredicted RBP21.67■■□□□ 1.06
RETREG3-205ENST00000586870 TEX11Q8IYF3 940 aa21.67■■□□□ 1.06
RETREG3-205ENST00000586870 MIGA1Q8NAN2 632 aa21.67■■□□□ 1.06
RETREG3-205ENST00000586870 TMEM39BQ9GZU3 492 aa21.67■■□□□ 1.06
RETREG3-205ENST00000586870 PRC1O43663 620 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms