RNA–Protein interactions for RNA: ENST00000586574.5

GIT1-215, Transcript of GIT ArfGAP 1, human

TSL 4

Gene GIT1, Length 576 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GIT1-215	ENST00000586574	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.23	□□□□□ -0.29
GIT1-215	ENST00000586574	NSUN4	Q96CB9	384 aa	Known RBP	13.23	□□□□□ -0.29
GIT1-215	ENST00000586574	GDF15	Q99988	308 aa		13.23	□□□□□ -0.29
GIT1-215	ENST00000586574	HMG20B	Q9P0W2	317 aa		13.23	□□□□□ -0.29
GIT1-215	ENST00000586574	TRIM32	Q13049	653 aa		13.22	□□□□□ -0.29
GIT1-215	ENST00000586574	MTX1	Q13505	466 aa		13.22	□□□□□ -0.29
GIT1-215	ENST00000586574	SH3D19	Q5HYK7	790 aa		13.22	□□□□□ -0.29
GIT1-215	ENST00000586574	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.22	□□□□□ -0.29
GIT1-215	ENST00000586574	PI16	Q6UXB8	463 aa		13.22	□□□□□ -0.29
GIT1-215	ENST00000586574	TBC1D9	Q6ZT07	1266 aa		13.22	□□□□□ -0.29
GIT1-215	ENST00000586574	ERICH6	Q7L0X2	663 aa		13.22	□□□□□ -0.29
GIT1-215	ENST00000586574	SLF2	Q8IX21	1173 aa		13.22	□□□□□ -0.29
GIT1-215	ENST00000586574	COA7	Q96BR5	231 aa		13.22	□□□□□ -0.29
GIT1-215	ENST00000586574	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
GIT1-215	ENST00000586574	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.22	□□□□□ -0.29
GIT1-215	ENST00000586574	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
GIT1-215	ENST00000586574	COL6A3	P12111	3177 aa		13.22	□□□□□ -0.29
GIT1-215	ENST00000586574	PLXNB2	O15031	1838 aa		13.21	□□□□□ -0.29
GIT1-215	ENST00000586574	CAP2	P40123	477 aa		13.21	□□□□□ -0.29
GIT1-215	ENST00000586574	JAG1	P78504	1218 aa		13.21	□□□□□ -0.29
GIT1-215	ENST00000586574	ZNF280C	Q8ND82	737 aa		13.21	□□□□□ -0.29
GIT1-215	ENST00000586574	LOC285556	D6RIA3	1793 aa		13.21	□□□□□ -0.29
GIT1-215	ENST00000586574	COL2A1	P02458	1487 aa	Predicted RBP	13.21	□□□□□ -0.3
GIT1-215	ENST00000586574	PEX10	O60683	326 aa		13.2	□□□□□ -0.3
GIT1-215	ENST00000586574	BMP8B	P34820	402 aa		13.2	□□□□□ -0.3
GIT1-215	ENST00000586574	GCLC	P48506	637 aa	Predicted RBP	13.2	□□□□□ -0.3
GIT1-215	ENST00000586574	HMGCS2	P54868	508 aa		13.2	□□□□□ -0.3
GIT1-215	ENST00000586574	NECAB2	Q7Z6G3	386 aa		13.2	□□□□□ -0.3
GIT1-215	ENST00000586574	API5	Q9BZZ5	524 aa	Known RBP	13.2	□□□□□ -0.3
GIT1-215	ENST00000586574	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.2	□□□□□ -0.3
GIT1-215	ENST00000586574	MORF4L1	Q9UBU8	362 aa		13.2	□□□□□ -0.3
GIT1-215	ENST00000586574	PNMA3	Q9UL41	463 aa		13.2	□□□□□ -0.3
GIT1-215	ENST00000586574	TAOK2	Q9UL54	1235 aa		13.2	□□□□□ -0.3
GIT1-215	ENST00000586574	RPTOR	Q8N122	1335 aa		13.19	□□□□□ -0.3
GIT1-215	ENST00000586574	SIPA1L1	O43166	1804 aa		13.19	□□□□□ -0.3
GIT1-215	ENST00000586574	MAP4K4	O95819	1239 aa	Predicted RBP	13.19	□□□□□ -0.3
GIT1-215	ENST00000586574	HMGCR	P04035	888 aa		13.19	□□□□□ -0.3
GIT1-215	ENST00000586574	ARID4A	P29374	1257 aa	Predicted RBP	13.19	□□□□□ -0.3
GIT1-215	ENST00000586574	MVP	Q14764	893 aa	Known RBP	13.19	□□□□□ -0.3
GIT1-215	ENST00000586574	POTEE	Q6S8J3	1075 aa		13.19	□□□□□ -0.3
GIT1-215	ENST00000586574	ANKLE1	Q8NAG6	615 aa		13.19	□□□□□ -0.3
GIT1-215	ENST00000586574	SPATA5	Q8NB90	893 aa		13.19	□□□□□ -0.3
GIT1-215	ENST00000586574	TRIB2	Q92519	343 aa		13.19	□□□□□ -0.3
GIT1-215	ENST00000586574	HDAC5	Q9UQL6	1122 aa		13.19	□□□□□ -0.3
GIT1-215	ENST00000586574	AKAP2	Q9Y2D5	859 aa		13.19	□□□□□ -0.3
GIT1-215	ENST00000586574	USP17L5	A8MUK1	530 aa		13.18	□□□□□ -0.3
GIT1-215	ENST00000586574	SRGAP3	O43295	1099 aa		13.18	□□□□□ -0.3
GIT1-215	ENST00000586574	CT47B1	P0C2W7	299 aa	Predicted RBP	13.18	□□□□□ -0.3
GIT1-215	ENST00000586574	MCAM	P43121	646 aa		13.18	□□□□□ -0.3
GIT1-215	ENST00000586574	MAP3K21	Q5TCX8	1036 aa		13.18	□□□□□ -0.3
GIT1-215	ENST00000586574	SLC17A8	Q8NDX2	589 aa		13.18	□□□□□ -0.3
GIT1-215	ENST00000586574	NEUROD6	Q96NK8	337 aa		13.18	□□□□□ -0.3
GIT1-215	ENST00000586574	P2RX7	Q99572	595 aa	Known RBP	13.18	□□□□□ -0.3
GIT1-215	ENST00000586574	WDR18	Q9BV38	432 aa		13.18	□□□□□ -0.3
GIT1-215	ENST00000586574	DNAJC18	Q9H819	358 aa		13.18	□□□□□ -0.3
GIT1-215	ENST00000586574	TXNRD2	Q9NNW7	524 aa		13.18	□□□□□ -0.3
GIT1-215	ENST00000586574	OGDHL	Q9ULD0	1010 aa		13.18	□□□□□ -0.3
GIT1-215	ENST00000586574	ATAD5	Q96QE3	1844 aa		13.18	□□□□□ -0.3
GIT1-215	ENST00000586574	DLL1	O00548	723 aa		13.17	□□□□□ -0.3
GIT1-215	ENST00000586574	LDHC	P07864	332 aa		13.17	□□□□□ -0.3
GIT1-215	ENST00000586574	HOXA7	P31268	230 aa	Predicted RBP	13.17	□□□□□ -0.3
GIT1-215	ENST00000586574	RARS	P54136	660 aa	Known RBP	13.17	□□□□□ -0.3
GIT1-215	ENST00000586574	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.17	□□□□□ -0.3
GIT1-215	ENST00000586574	METTL16	Q86W50	562 aa	Known RBP	13.17	□□□□□ -0.3
GIT1-215	ENST00000586574	C7orf61	Q8IZ16	206 aa		13.17	□□□□□ -0.3
GIT1-215	ENST00000586574	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.17	□□□□□ -0.3
GIT1-215	ENST00000586574	TBC1D2	Q9BYX2	928 aa		13.17	□□□□□ -0.3
GIT1-215	ENST00000586574	HMX1	Q9NP08	348 aa	Predicted RBP	13.17	□□□□□ -0.3
GIT1-215	ENST00000586574	RBPJL	Q9UBG7	517 aa		13.17	□□□□□ -0.3
GIT1-215	ENST00000586574	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.17	□□□□□ -0.3
GIT1-215	ENST00000586574	PFAS	O15067	1338 aa		13.16	□□□□□ -0.3
GIT1-215	ENST00000586574		A0A0C4DFX4	3053 aa		13.16	□□□□□ -0.3
GIT1-215	ENST00000586574	PNMA6E	A0A0J9YXQ4	647 aa		13.16	□□□□□ -0.3
GIT1-215	ENST00000586574	BACE1	P56817	501 aa		13.16	□□□□□ -0.3
GIT1-215	ENST00000586574	GSTO1	P78417	241 aa		13.16	□□□□□ -0.3
GIT1-215	ENST00000586574		Q3C1V9	767 aa		13.16	□□□□□ -0.3
GIT1-215	ENST00000586574	ADGRA1	Q86SQ6	560 aa		13.16	□□□□□ -0.3
GIT1-215	ENST00000586574	TEX11	Q8IYF3	940 aa		13.16	□□□□□ -0.3
GIT1-215	ENST00000586574	ARHGAP45	Q92619	1136 aa		13.16	□□□□□ -0.3
GIT1-215	ENST00000586574	USP6NL	Q92738	828 aa		13.16	□□□□□ -0.3
GIT1-215	ENST00000586574	NBPF3	Q9H094	633 aa		13.16	□□□□□ -0.3
GIT1-215	ENST00000586574	RAI14	Q9P0K7	980 aa		13.16	□□□□□ -0.3
GIT1-215	ENST00000586574	HERC5	Q9UII4	1024 aa	Known RBP	13.16	□□□□□ -0.3
GIT1-215	ENST00000586574	TNN	Q9UQP3	1299 aa		13.16	□□□□□ -0.3
GIT1-215	ENST00000586574	GNAI3	P08754	354 aa		13.15	□□□□□ -0.3
GIT1-215	ENST00000586574	COL6A1	P12109	1028 aa		13.15	□□□□□ -0.3
GIT1-215	ENST00000586574	XRCC5	P13010	732 aa	Known RBP	13.15	□□□□□ -0.3
GIT1-215	ENST00000586574	SYN1	P17600	705 aa		13.15	□□□□□ -0.3
GIT1-215	ENST00000586574	CYP2B6	P20813	491 aa		13.15	□□□□□ -0.3
GIT1-215	ENST00000586574	PPP4C	P60510	307 aa		13.15	□□□□□ -0.3
GIT1-215	ENST00000586574	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
GIT1-215	ENST00000586574	MTMR2	Q13614	643 aa		13.15	□□□□□ -0.3
GIT1-215	ENST00000586574	GPR153	Q6NV75	609 aa		13.15	□□□□□ -0.3
GIT1-215	ENST00000586574	AS3MT	Q9HBK9	375 aa		13.15	□□□□□ -0.3
GIT1-215	ENST00000586574	PI4KB	Q9UBF8	816 aa		13.15	□□□□□ -0.3
GIT1-215	ENST00000586574	DDX60L	Q5H9U9	1706 aa	Known RBP	13.15	□□□□□ -0.3
GIT1-215	ENST00000586574	CUL9	Q8IWT3	2517 aa		13.15	□□□□□ -0.3
GIT1-215	ENST00000586574	MAGEA10	P43363	369 aa	Predicted RBP	13.14	□□□□□ -0.31
GIT1-215	ENST00000586574	HERVK_113	P62684	666 aa		13.14	□□□□□ -0.31
GIT1-215	ENST00000586574	LRIT3	Q3SXY7	679 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 66 ms