RNA–Protein interactions for RNA: ENST00000586287.1

TREM1-203, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

TSL 2

Gene TREM1, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-203ENST00000586287 APOBEC3FQ8IUX4 373 aaKnown RBP9.77□□□□□ -0.85
TREM1-203ENST00000586287 DYNLL2Q96FJ2 89 aa9.77□□□□□ -0.85
TREM1-203ENST00000586287 DEFB129Q9H1M3 183 aa9.77□□□□□ -0.85
TREM1-203ENST00000586287 DHX36Q9H2U1 1008 aaKnown RBP9.77□□□□□ -0.85
TREM1-203ENST00000586287 DNAJC18Q9H819 358 aa9.77□□□□□ -0.85
TREM1-203ENST00000586287 UPF2Q9HAU5 1272 aaKnown RBP9.77□□□□□ -0.85
TREM1-203ENST00000586287 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.77□□□□□ -0.85
TREM1-203ENST00000586287 CEP350Q5VT06 3117 aa9.76□□□□□ -0.85
TREM1-203ENST00000586287 E7EWF7 191 aa9.76□□□□□ -0.85
TREM1-203ENST00000586287 MCCP23508 829 aa9.76□□□□□ -0.85
TREM1-203ENST00000586287 TNNI2P48788 182 aa9.76□□□□□ -0.85
TREM1-203ENST00000586287 MAP3K10Q02779 954 aa9.76□□□□□ -0.85
TREM1-203ENST00000586287 TNFAIP1Q13829 316 aa9.76□□□□□ -0.85
TREM1-203ENST00000586287 EAPPQ56P03 285 aaPredicted RBP9.76□□□□□ -0.85
TREM1-203ENST00000586287 AKNAD1Q5T1N1 836 aa9.76□□□□□ -0.85
TREM1-203ENST00000586287 RNF20Q5VTR2 975 aa9.76□□□□□ -0.85
TREM1-203ENST00000586287 C16orf86Q6ZW13 317 aa9.76□□□□□ -0.85
TREM1-203ENST00000586287 TTC6Q86TZ1 520 aa9.76□□□□□ -0.85
TREM1-203ENST00000586287 PNMA8AQ86V59 439 aaPredicted RBP9.76□□□□□ -0.85
TREM1-203ENST00000586287 SLC44A5Q8NCS7 719 aa9.76□□□□□ -0.85
TREM1-203ENST00000586287 ZNF526Q8TF50 670 aaPredicted RBP9.76□□□□□ -0.85
TREM1-203ENST00000586287 STAG1Q8WVM7 1258 aa9.76□□□□□ -0.85
TREM1-203ENST00000586287 EHD4Q9H223 541 aa9.76□□□□□ -0.85
TREM1-203ENST00000586287 PI4KBQ9UBF8 816 aa9.76□□□□□ -0.85
TREM1-203ENST00000586287 NAV1Q8NEY1 1877 aa9.76□□□□□ -0.85
TREM1-203ENST00000586287 NEDD4P46934 1319 aa9.76□□□□□ -0.85
TREM1-203ENST00000586287 ADM5C9JUS6 153 aa9.75□□□□□ -0.85
TREM1-203ENST00000586287 HLA-DOAP06340 250 aa9.75□□□□□ -0.85
TREM1-203ENST00000586287 ZKSCAN1P17029 563 aaPredicted RBP9.75□□□□□ -0.85
TREM1-203ENST00000586287 CDK8P49336 464 aa9.75□□□□□ -0.85
TREM1-203ENST00000586287 NBPF12Q5TAG4 269 aaPredicted RBP9.75□□□□□ -0.85
TREM1-203ENST00000586287 PRAMEF18Q5VWM3 479 aa9.75□□□□□ -0.85
TREM1-203ENST00000586287 FOXP4Q8IVH2 680 aaPredicted RBP9.75□□□□□ -0.85
TREM1-203ENST00000586287 STK11IPQ8N1F8 1099 aa9.75□□□□□ -0.85
TREM1-203ENST00000586287 DCPSQ96C86 337 aaKnown RBP9.75□□□□□ -0.85
TREM1-203ENST00000586287 CSRNP1Q96S65 589 aa9.75□□□□□ -0.85
TREM1-203ENST00000586287 SERPINB13Q9UIV8 391 aa9.75□□□□□ -0.85
TREM1-203ENST00000586287 PPP2R3BQ9Y5P8 575 aa9.75□□□□□ -0.85
TREM1-203ENST00000586287 MYH1P12882 1939 aa9.75□□□□□ -0.85
TREM1-203ENST00000586287 SIPA1L1O43166 1804 aa9.75□□□□□ -0.85
TREM1-203ENST00000586287 FAM196BA6NMK8 535 aa9.74□□□□□ -0.85
TREM1-203ENST00000586287 ORC4O43929 436 aa9.74□□□□□ -0.85
TREM1-203ENST00000586287 TBC1D12O60347 775 aa9.74□□□□□ -0.85
TREM1-203ENST00000586287 PRDM1O75626 825 aa9.74□□□□□ -0.85
TREM1-203ENST00000586287 SHMT1P34896 483 aa9.74□□□□□ -0.85
TREM1-203ENST00000586287 EXOSC10Q01780 885 aaKnown RBP9.74□□□□□ -0.85
TREM1-203ENST00000586287 RRP1BQ14684 758 aaKnown RBP9.74□□□□□ -0.85
TREM1-203ENST00000586287 MFSD6Q6ZSS7 791 aa9.74□□□□□ -0.85
TREM1-203ENST00000586287 KRT26Q7Z3Y9 468 aa9.74□□□□□ -0.85
TREM1-203ENST00000586287 USP48Q86UV5 1035 aa9.74□□□□□ -0.85
TREM1-203ENST00000586287 ZSCAN29Q8IWY8 852 aaPredicted RBP9.74□□□□□ -0.85
TREM1-203ENST00000586287 AMOTL1Q8IY63 956 aa9.74□□□□□ -0.85
TREM1-203ENST00000586287 MB21D2Q8IYB1 491 aaPredicted RBP9.74□□□□□ -0.85
TREM1-203ENST00000586287 JAKMIP1Q96N16 626 aaKnown RBP9.74□□□□□ -0.85
TREM1-203ENST00000586287 NEK1Q96PY6 1258 aa9.74□□□□□ -0.85
TREM1-203ENST00000586287 GLIS2Q9BZE0 524 aaPredicted RBP9.74□□□□□ -0.85
TREM1-203ENST00000586287 TM6SF1Q9BZW5 370 aa9.74□□□□□ -0.85
TREM1-203ENST00000586287 ZSWIM6Q9HCJ5 1215 aa9.74□□□□□ -0.85
TREM1-203ENST00000586287 TSHZ2Q9NRE2 1034 aa9.74□□□□□ -0.85
TREM1-203ENST00000586287 POLR2AP24928 1970 aaKnown RBP9.74□□□□□ -0.85
TREM1-203ENST00000586287 LAMA4Q16363 1823 aa9.73□□□□□ -0.85
TREM1-203ENST00000586287 SSC5DA1L4H1 1573 aa9.73□□□□□ -0.85
TREM1-203ENST00000586287 B4E1Z4 1266 aa9.73□□□□□ -0.85
TREM1-203ENST00000586287 KIF3CO14782 793 aa9.73□□□□□ -0.85
TREM1-203ENST00000586287 PCP11498 1178 aaKnown RBP9.73□□□□□ -0.85
TREM1-203ENST00000586287 CPA1P15085 419 aa9.73□□□□□ -0.85
TREM1-203ENST00000586287 RASA1P20936 1047 aa9.73□□□□□ -0.85
TREM1-203ENST00000586287 KCNA4P22459 653 aa9.73□□□□□ -0.85
TREM1-203ENST00000586287 ANTXR2P58335 489 aa9.73□□□□□ -0.85
TREM1-203ENST00000586287 PDE4BQ07343 736 aa9.73□□□□□ -0.85
TREM1-203ENST00000586287 KRT32Q14532 448 aa9.73□□□□□ -0.85
TREM1-203ENST00000586287 MAP1SQ66K74 1059 aaPredicted RBP9.73□□□□□ -0.85
TREM1-203ENST00000586287 TATDN1Q6P1N9 297 aa9.73□□□□□ -0.85
TREM1-203ENST00000586287 CYB5R4Q7L1T6 521 aa9.73□□□□□ -0.85
TREM1-203ENST00000586287 CDC37L1Q7L3B6 337 aa9.73□□□□□ -0.85
TREM1-203ENST00000586287 MIGA2Q7L4E1 593 aa9.73□□□□□ -0.85
TREM1-203ENST00000586287 LDHDQ86WU2 507 aa9.73□□□□□ -0.85
TREM1-203ENST00000586287 SULF1Q8IWU6 871 aa9.73□□□□□ -0.85
TREM1-203ENST00000586287 NCOA7Q8NI08 942 aa9.73□□□□□ -0.85
TREM1-203ENST00000586287 RNF41Q9H4P4 317 aaPredicted RBP9.73□□□□□ -0.85
TREM1-203ENST00000586287 ZSWIM5Q9P217 1185 aa9.73□□□□□ -0.85
TREM1-203ENST00000586287 HERC5Q9UII4 1024 aaKnown RBP9.73□□□□□ -0.85
TREM1-203ENST00000586287 TAOK2Q9UL54 1235 aa9.73□□□□□ -0.85
TREM1-203ENST00000586287 CLEC11AQ9Y240 323 aa9.73□□□□□ -0.85
TREM1-203ENST00000586287 LAMB1P07942 1786 aa9.73□□□□□ -0.85
TREM1-203ENST00000586287 PHF20L1A8MW92 1017 aa9.72□□□□□ -0.85
TREM1-203ENST00000586287 KDM4AO75164 1064 aa9.72□□□□□ -0.85
TREM1-203ENST00000586287 SLC3A2P08195 630 aaKnown RBP9.72□□□□□ -0.85
TREM1-203ENST00000586287 PSMA5P28066 241 aa9.72□□□□□ -0.85
TREM1-203ENST00000586287 JAG1P78504 1218 aa9.72□□□□□ -0.85
TREM1-203ENST00000586287 FMR1Q06787 632 aaKnown RBP eCLIP9.72□□□□□ -0.85
TREM1-203ENST00000586287 RRP12Q5JTH9 1297 aaKnown RBP9.72□□□□□ -0.85
TREM1-203ENST00000586287 RUFY3Q7L099 469 aa9.72□□□□□ -0.85
TREM1-203ENST00000586287 TCEANC2Q96MN5 208 aa9.72□□□□□ -0.85
TREM1-203ENST00000586287 TTC14Q96N46 770 aa9.72□□□□□ -0.85
TREM1-203ENST00000586287 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.72□□□□□ -0.85
TREM1-203ENST00000586287 UPF3BQ9BZI7 483 aaKnown RBP9.72□□□□□ -0.85
TREM1-203ENST00000586287 KRT23Q9C075 422 aa9.72□□□□□ -0.85
TREM1-203ENST00000586287 GPBP1L1Q9HC44 474 aaPredicted RBP9.72□□□□□ -0.85
TREM1-203ENST00000586287 SWAP70Q9UH65 585 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms