RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	ADCY3	O60266	1144 aa		20.11	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	SURF6	O75683	361 aa	Known RBP	20.11	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	PPP4C	P60510	307 aa		20.11	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	UBXN2A	P68543	259 aa		20.11	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	ANKRD13C	Q8N6S4	541 aa		20.11	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	ZNF280C	Q8ND82	737 aa		20.11	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	SLAIN1	Q8ND83	568 aa		20.11	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	SMCR8	Q8TEV9	937 aa	Predicted RBP	20.11	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	AK9	Q5TCS8	1911 aa		20.11	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	RBBP6	Q7Z6E9	1792 aa	Known RBP	20.11	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	MYH2	Q9UKX2	1941 aa		20.1	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	MYH13	Q9UKX3	1938 aa		20.1	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	CYP2E1	P05181	493 aa	Predicted RBP	20.1	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	CCDC158	Q5M9N0	1113 aa		20.1	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	TTC39A	Q5SRH9	613 aa		20.1	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	NAA16	Q6N069	864 aa	Predicted RBP	20.1	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	UBE2Q1	Q7Z7E8	422 aa		20.1	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	PROCA1	Q8NCQ7	364 aa	Predicted RBP	20.1	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	UNC93B1	Q9H1C4	597 aa		20.1	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	PI4KB	Q9UBF8	816 aa		20.1	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	USP17L5	A8MUK1	530 aa		20.09	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	TNPO2	O14787	897 aa	Known RBP	20.09	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	ZBTB7B	O15156	539 aa	Predicted RBP	20.09	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	BAG3	O95817	575 aa		20.09	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	ELN	P15502	786 aa		20.09	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	IRF5	Q13568	498 aa		20.09	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	ADGRA1	Q86SQ6	560 aa		20.09	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	ZNF512B	Q96KM6	892 aa	Predicted RBP	20.09	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	C1orf115	Q9H7X2	142 aa		20.09	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	AATF	Q9NY61	560 aa	Known RBP eCLIP	20.09	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	HERC5	Q9UII4	1024 aa	Known RBP	20.09	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	NOP58	Q9Y2X3	529 aa	Known RBP	20.09	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	HMGCS2	P54868	508 aa		20.08	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	JAG1	P78504	1218 aa		20.08	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	OS9	Q13438	667 aa	Predicted RBP	20.08	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	PXYLP1	Q8TE99	480 aa		20.08	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	TGFBRAP1	Q8WUH2	860 aa		20.08	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	DPF3	Q92784	378 aa		20.08	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	NOL10	Q9BSC4	688 aa	Known RBP	20.08	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	TBC1D2	Q9BYX2	928 aa		20.08	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	DHX36	Q9H2U1	1008 aa	Known RBP	20.08	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	SGPL1	O95470	568 aa		20.07	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	RLBP1	P12271	317 aa		20.07	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	PLCG2	P16885	1265 aa		20.07	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	ZAP70	P43403	619 aa		20.07	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	FXR1	P51114	621 aa	Known RBP eCLIP	20.07	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	SH3D19	Q5HYK7	790 aa		20.07	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	METTL16	Q86W50	562 aa	Known RBP	20.07	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	FOXP4	Q8IVH2	680 aa	Predicted RBP	20.07	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	MAPKAPK5	Q8IW41	473 aa		20.07	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	U2AF1L4	Q8WU68	220 aa	Known RBP	20.07	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	PIH1D3	Q9NQM4	214 aa	Known RBP	20.07	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	PNMA3	Q9UL41	463 aa		20.07	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	COL2A1	P02458	1487 aa	Predicted RBP	20.06	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	FAM110C	Q1W6H9	321 aa		20.06	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	COA7	Q96BR5	231 aa		20.06	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	WDR18	Q9BV38	432 aa		20.06	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	CCDC8	Q9H0W5	538 aa	Predicted RBP	20.06	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	ASCC2	Q9H1I8	757 aa	Predicted RBP	20.06	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	INHA	P05111	366 aa		20.05	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	GCLC	P48506	637 aa	Predicted RBP	20.05	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	EAF2	Q96CJ1	260 aa	Predicted RBP	20.05	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	DNAJC18	Q9H819	358 aa		20.05	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	DBNL	Q9UJU6	430 aa	Known RBP	20.05	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	PALD1	Q9ULE6	856 aa		20.05	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	HNRNPU	Q00839	825 aa	Known RBP eCLIP	20.04	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	PABPC4	Q13310	644 aa	Known RBP eCLIP	20.04	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	AS3MT	Q9HBK9	375 aa		20.04	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	TLR7	Q9NYK1	1049 aa	Known RBP	20.04	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	GJD2	Q9UKL4	321 aa		20.04	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	IGSF3	O75054	1194 aa		20.03	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	TFRC	P02786	760 aa	Known RBP	20.03	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	BACE1	P56817	501 aa		20.03	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	DYNLL1	P63167	89 aa	Known RBP	20.03	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	SHROOM1	Q2M3G4	852 aa	Predicted RBP	20.03	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	ITPRIP	Q8IWB1	547 aa		20.03	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	FTSJ3	Q8IY81	847 aa	Known RBP	20.03	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	MIER1	Q8N108	512 aa		20.03	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	TAOK2	Q9UL54	1235 aa		20.03	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	FLT1	P17948	1338 aa		20.02	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	ASNS	P08243	561 aa		20.02	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	CYP7A1	P22680	504 aa		20.02	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	MTMR2	Q13614	643 aa		20.02	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	DEFB118	Q96PH6	123 aa		20.02	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	P2RX7	Q99572	595 aa	Known RBP	20.02	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	HTATIP2	Q9BUP3	242 aa		20.02	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	SAP30BP	Q9UHR5	308 aa	Known RBP	20.02	■□□□□ 0.8
PRKAR1A-206	ENST00000585460	DOCK2	Q92608	1830 aa		20.02	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	FARP2	O94887	1054 aa	Predicted RBP	20.01	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	HOXA7	P31268	230 aa	Predicted RBP	20.01	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	PAK6	Q9NQU5	681 aa	Predicted RBP	20.01	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	CEP290	O15078	2479 aa		20.01	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	C19orf81	C9J6K1	198 aa		20	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	PEX10	O60683	326 aa		20	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	CEP85	Q6P2H3	762 aa		20	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	CHRDL2	Q6WN34	429 aa		20	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	20	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	CRISPLD2	Q9H0B8	497 aa		20	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	GINM1	Q9NU53	330 aa		20	■□□□□ 0.79
PRKAR1A-206	ENST00000585460	TMOD4	Q9NZQ9	345 aa		20	■□□□□ 0.79

Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms