RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 RFX7Q2KHR2 1363 aa27.9■■■□□ 2.06
LSM7-202ENST00000585395 PDE1AP54750 535 aa27.9■■■□□ 2.06
LSM7-202ENST00000585395 OTUD7AQ8TE49 926 aaPredicted RBP27.9■■■□□ 2.06
LSM7-202ENST00000585395 TMEM106CQ9BVX2 250 aa27.9■■■□□ 2.06
LSM7-202ENST00000585395 ANTXR1Q9H6X2 564 aa27.9■■■□□ 2.06
LSM7-202ENST00000585395 GJA5P36382 358 aa27.89■■■□□ 2.06
LSM7-202ENST00000585395 SP3Q02447 781 aa27.89■■■□□ 2.06
LSM7-202ENST00000585395 MAGEB6Q8N7X4 407 aa27.89■■■□□ 2.06
LSM7-202ENST00000585395 SH3RF3Q8TEJ3 882 aaPredicted RBP27.89■■■□□ 2.06
LSM7-202ENST00000585395 ERO1BQ86YB8 467 aa27.88■■■□□ 2.05
LSM7-202ENST00000585395 PI4K2BQ8TCG2 481 aa27.88■■■□□ 2.05
LSM7-202ENST00000585395 CNKSR2Q8WXI2 1034 aa27.88■■■□□ 2.05
LSM7-202ENST00000585395 COLQQ9Y215 455 aaPredicted RBP27.88■■■□□ 2.05
LSM7-202ENST00000585395 SNCAIPQ9Y6H5 919 aa27.88■■■□□ 2.05
LSM7-202ENST00000585395 SPDYE5A6NIY4 337 aa27.87■■■□□ 2.05
LSM7-202ENST00000585395 INPP5BP32019 993 aa27.87■■■□□ 2.05
LSM7-202ENST00000585395 GTF2A2P52657 109 aa27.87■■■□□ 2.05
LSM7-202ENST00000585395 SLC9C2Q5TAH2 1124 aa27.87■■■□□ 2.05
LSM7-202ENST00000585395 TSHZ3Q63HK5 1081 aa27.87■■■□□ 2.05
LSM7-202ENST00000585395 PPP4R2Q9NY27 417 aa27.87■■■□□ 2.05
LSM7-202ENST00000585395 DDTLA6NHG4 134 aaPredicted RBP27.86■■■□□ 2.05
LSM7-202ENST00000585395 ZNF333Q96JL9 665 aa27.86■■■□□ 2.05
LSM7-202ENST00000585395 OSBPL5Q9H0X9 879 aaPredicted RBP27.86■■■□□ 2.05
LSM7-202ENST00000585395 OSBPL3Q9H4L5 887 aa27.86■■■□□ 2.05
LSM7-202ENST00000585395 CEP290O15078 2479 aa27.86■■■□□ 2.05
LSM7-202ENST00000585395 TESPA1A2RU30 521 aaPredicted RBP27.85■■■□□ 2.05
LSM7-202ENST00000585395 NPM3O75607 178 aaKnown RBP27.85■■■□□ 2.05
LSM7-202ENST00000585395 ARHGEF6Q15052 776 aa27.85■■■□□ 2.05
LSM7-202ENST00000585395 NBPF11Q86T75 865 aa27.85■■■□□ 2.05
LSM7-202ENST00000585395 KBTBD3Q8NAB2 608 aa27.85■■■□□ 2.05
LSM7-202ENST00000585395 MIGA1Q8NAN2 632 aa27.85■■■□□ 2.05
LSM7-202ENST00000585395 TGFBRAP1Q8WUH2 860 aa27.85■■■□□ 2.05
LSM7-202ENST00000585395 CCL15-CCL14A0A0B4J2E2 113 aa27.84■■■□□ 2.05
LSM7-202ENST00000585395 ZFYP08048 801 aaPredicted RBP27.84■■■□□ 2.05
LSM7-202ENST00000585395 PDE6AP16499 860 aa27.84■■■□□ 2.05
LSM7-202ENST00000585395 PPP4CP60510 307 aa27.84■■■□□ 2.05
LSM7-202ENST00000585395 CCL15Q16663 113 aa27.84■■■□□ 2.05
LSM7-202ENST00000585395 SH3BP5LQ7L8J4 393 aa27.84■■■□□ 2.05
LSM7-202ENST00000585395 ADGRA1Q86SQ6 560 aa27.84■■■□□ 2.05
LSM7-202ENST00000585395 PLEKHM2Q8IWE5 1019 aa27.84■■■□□ 2.05
LSM7-202ENST00000585395 TRIM34Q9BYJ4 488 aa27.84■■■□□ 2.05
LSM7-202ENST00000585395 PICK1Q9NRD5 415 aa27.84■■■□□ 2.05
LSM7-202ENST00000585395 DYNLL1P63167 89 aaKnown RBP27.83■■■□□ 2.05
LSM7-202ENST00000585395 PPIL2Q13356 520 aa27.83■■■□□ 2.05
LSM7-202ENST00000585395 MAPKAPK5Q8IW41 473 aa27.83■■■□□ 2.05
LSM7-202ENST00000585395 EDC3Q96F86 508 aaKnown RBP27.83■■■□□ 2.05
LSM7-202ENST00000585395 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.83■■■□□ 2.05
LSM7-202ENST00000585395 ZNF112Q9UJU3 913 aa27.83■■■□□ 2.05
LSM7-202ENST00000585395 USP5P45974 858 aa27.82■■■□□ 2.04
LSM7-202ENST00000585395 SNAPC2Q13487 334 aa27.82■■■□□ 2.04
LSM7-202ENST00000585395 TICAM2Q86XR7 235 aa27.82■■■□□ 2.04
LSM7-202ENST00000585395 EVI5LQ96CN4 794 aa27.82■■■□□ 2.04
LSM7-202ENST00000585395 PTPN18Q99952 460 aa27.82■■■□□ 2.04
LSM7-202ENST00000585395 CDK5RAP2Q96SN8 1893 aa27.82■■■□□ 2.04
LSM7-202ENST00000585395 ATRNL1Q5VV63 1379 aa27.82■■■□□ 2.04
LSM7-202ENST00000585395 TRIOBPQ9H2D6 2365 aa27.81■■■□□ 2.04
LSM7-202ENST00000585395 CETPP11597 493 aa27.81■■■□□ 2.04
LSM7-202ENST00000585395 PPATQ06203 517 aa27.81■■■□□ 2.04
LSM7-202ENST00000585395 UBE3CQ15386 1083 aa27.81■■■□□ 2.04
LSM7-202ENST00000585395 SLC9C1Q4G0N8 1177 aa27.81■■■□□ 2.04
LSM7-202ENST00000585395 FSD1Q9BTV5 496 aa27.81■■■□□ 2.04
LSM7-202ENST00000585395 COL2A1P02458 1487 aaPredicted RBP27.81■■■□□ 2.04
LSM7-202ENST00000585395 ADD2P35612 726 aa27.8■■■□□ 2.04
LSM7-202ENST00000585395 NOL9Q5SY16 702 aaKnown RBP27.8■■■□□ 2.04
LSM7-202ENST00000585395 DHX36Q9H2U1 1008 aaKnown RBP27.8■■■□□ 2.04
LSM7-202ENST00000585395 ZNF532Q9HCE3 1301 aa27.8■■■□□ 2.04
LSM7-202ENST00000585395 FOCADQ5VW36 1801 aa27.79■■■□□ 2.04
LSM7-202ENST00000585395 FLT1P17948 1338 aa27.79■■■□□ 2.04
LSM7-202ENST00000585395 IRF6O14896 467 aa27.79■■■□□ 2.04
LSM7-202ENST00000585395 CAP1Q01518 475 aa27.79■■■□□ 2.04
LSM7-202ENST00000585395 SCYL3Q8IZE3 742 aa27.79■■■□□ 2.04
LSM7-202ENST00000585395 CRACR2BQ8N4Y2 399 aaPredicted RBP27.79■■■□□ 2.04
LSM7-202ENST00000585395 DOCK1Q14185 1865 aa27.78■■■□□ 2.04
LSM7-202ENST00000585395 MAGEB6P1A0A0J9YX57 407 aa27.78■■■□□ 2.04
LSM7-202ENST00000585395 FAM196BA6NMK8 535 aa27.78■■■□□ 2.04
LSM7-202ENST00000585395 TRIM6-TRIM34B2RNG4 842 aa27.78■■■□□ 2.04
LSM7-202ENST00000585395 HLA-DOAP06340 250 aa27.78■■■□□ 2.04
LSM7-202ENST00000585395 SLC4A8Q2Y0W8 1093 aa27.78■■■□□ 2.04
LSM7-202ENST00000585395 BRI3BPQ8WY22 251 aa27.78■■■□□ 2.04
LSM7-202ENST00000585395 MS4A4AQ96JQ5 239 aa27.78■■■□□ 2.04
LSM7-202ENST00000585395 SAP30BPQ9UHR5 308 aaKnown RBP27.78■■■□□ 2.04
LSM7-202ENST00000585395 MYH7P12883 1935 aa27.77■■■□□ 2.04
LSM7-202ENST00000585395 TAF1CQ15572 869 aaPredicted RBP27.77■■■□□ 2.04
LSM7-202ENST00000585395 PI4KBQ9UBF8 816 aa27.77■■■□□ 2.04
LSM7-202ENST00000585395 MYH1P12882 1939 aa27.77■■■□□ 2.04
LSM7-202ENST00000585395 RNF113AO15541 343 aaKnown RBP27.76■■■□□ 2.03
LSM7-202ENST00000585395 TBC1D12O60347 775 aa27.76■■■□□ 2.03
LSM7-202ENST00000585395 CTNND1O60716 968 aaKnown RBP27.76■■■□□ 2.03
LSM7-202ENST00000585395 HERC5Q9UII4 1024 aaKnown RBP27.76■■■□□ 2.03
LSM7-202ENST00000585395 PTCH2Q9Y6C5 1203 aa27.76■■■□□ 2.03
LSM7-202ENST00000585395 SZT2Q5T011 3432 aa27.75■■■□□ 2.03
LSM7-202ENST00000585395 PHF20L1A8MW92 1017 aa27.75■■■□□ 2.03
LSM7-202ENST00000585395 H0YGN5 161 aa27.75■■■□□ 2.03
LSM7-202ENST00000585395 SLURP2P0DP57 97 aa27.75■■■□□ 2.03
LSM7-202ENST00000585395 PDE4AP27815 886 aa27.75■■■□□ 2.03
LSM7-202ENST00000585395 CRNKL1Q9BZJ0 848 aaKnown RBP27.75■■■□□ 2.03
LSM7-202ENST00000585395 ZFYVE28Q9HCC9 887 aa27.75■■■□□ 2.03
LSM7-202ENST00000585395 PALD1Q9ULE6 856 aa27.75■■■□□ 2.03
LSM7-202ENST00000585395 ZHX2Q9Y6X8 837 aa27.75■■■□□ 2.03
LSM7-202ENST00000585395 TCRBV5S4A2TA0A5A2 114 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms