RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 DOCK1Q14185 1865 aa18.45■□□□□ 0.54
VAPA-209ENST00000585042 PHIPQ8WWQ0 1821 aa18.44■□□□□ 0.54
VAPA-209ENST00000585042 TRIM75PA6NK02 468 aa18.44■□□□□ 0.54
VAPA-209ENST00000585042 CCL5P13501 91 aa18.44■□□□□ 0.54
VAPA-209ENST00000585042 CAP2P40123 477 aa18.44■□□□□ 0.54
VAPA-209ENST00000585042 PPP4CP60510 307 aa18.44■□□□□ 0.54
VAPA-209ENST00000585042 PRKCZQ05513 592 aa18.44■□□□□ 0.54
VAPA-209ENST00000585042 PI16Q6UXB8 463 aa18.44■□□□□ 0.54
VAPA-209ENST00000585042 ZNF280CQ8ND82 737 aa18.44■□□□□ 0.54
VAPA-209ENST00000585042 SMCR8Q8TEV9 937 aaPredicted RBP18.44■□□□□ 0.54
VAPA-209ENST00000585042 CLUAP1Q96AJ1 413 aa18.44■□□□□ 0.54
VAPA-209ENST00000585042 PI4KBQ9UBF8 816 aa18.44■□□□□ 0.54
VAPA-209ENST00000585042 BIN2Q9UBW5 565 aaPredicted RBP18.44■□□□□ 0.54
VAPA-209ENST00000585042 MGAMO43451 1857 aa18.43■□□□□ 0.54
VAPA-209ENST00000585042 PTPRFP10586 1907 aa18.43■□□□□ 0.54
VAPA-209ENST00000585042 PABPC4Q13310 644 aaKnown RBP eCLIP18.43■□□□□ 0.54
VAPA-209ENST00000585042 TEX11Q8IYF3 940 aa18.43■□□□□ 0.54
VAPA-209ENST00000585042 TMEM57Q8N5G2 664 aa18.43■□□□□ 0.54
VAPA-209ENST00000585042 RNF208Q9H0X6 261 aa18.43■□□□□ 0.54
VAPA-209ENST00000585042 USP17L5A8MUK1 530 aa18.42■□□□□ 0.54
VAPA-209ENST00000585042 ADCY3O60266 1144 aa18.42■□□□□ 0.54
VAPA-209ENST00000585042 ECM2O94769 699 aaPredicted RBP18.42■□□□□ 0.54
VAPA-209ENST00000585042 GCLCP48506 637 aaPredicted RBP18.42■□□□□ 0.54
VAPA-209ENST00000585042 SPP2Q13103 211 aa18.42■□□□□ 0.54
VAPA-209ENST00000585042 FAM110CQ1W6H9 321 aa18.42■□□□□ 0.54
VAPA-209ENST00000585042 TNNI3KQ59H18 835 aa18.42■□□□□ 0.54
VAPA-209ENST00000585042 SH3D19Q5HYK7 790 aa18.42■□□□□ 0.54
VAPA-209ENST00000585042 NAA16Q6N069 864 aaPredicted RBP18.42■□□□□ 0.54
VAPA-209ENST00000585042 UBE2Q1Q7Z7E8 422 aa18.42■□□□□ 0.54
VAPA-209ENST00000585042 FOXP4Q8IVH2 680 aaPredicted RBP18.42■□□□□ 0.54
VAPA-209ENST00000585042 SHISA4Q96DD7 197 aa18.42■□□□□ 0.54
VAPA-209ENST00000585042 AS3MTQ9HBK9 375 aa18.42■□□□□ 0.54
VAPA-209ENST00000585042 GINM1Q9NU53 330 aa18.42■□□□□ 0.54
VAPA-209ENST00000585042 GABRQQ9UN88 632 aa18.42■□□□□ 0.54
VAPA-209ENST00000585042 TNNQ9UQP3 1299 aa18.42■□□□□ 0.54
VAPA-209ENST00000585042 NOP58Q9Y2X3 529 aaKnown RBP18.42■□□□□ 0.54
VAPA-209ENST00000585042 FPGT-TNNI3KV9GXZ4 949 aa18.42■□□□□ 0.54
VAPA-209ENST00000585042 TNPO2O14787 897 aaKnown RBP18.41■□□□□ 0.54
VAPA-209ENST00000585042 SLURP2P0DP57 97 aa18.41■□□□□ 0.54
VAPA-209ENST00000585042 FLT3LGP49771 235 aa18.41■□□□□ 0.54
VAPA-209ENST00000585042 TTC39AQ5SRH9 613 aa18.41■□□□□ 0.54
VAPA-209ENST00000585042 METTL16Q86W50 562 aaKnown RBP18.41■□□□□ 0.54
VAPA-209ENST00000585042 COA7Q96BR5 231 aa18.41■□□□□ 0.54
VAPA-209ENST00000585042 HTATIP2Q9BUP3 242 aa18.41■□□□□ 0.54
VAPA-209ENST00000585042 TMED8Q6PL24 325 aaPredicted RBP18.4■□□□□ 0.54
VAPA-209ENST00000585042 SH3RF3Q8TEJ3 882 aaPredicted RBP18.4■□□□□ 0.54
VAPA-209ENST00000585042 WDR18Q9BV38 432 aa18.4■□□□□ 0.54
VAPA-209ENST00000585042 SURF6O75683 361 aaKnown RBP18.39■□□□□ 0.53
VAPA-209ENST00000585042 SGPL1O95470 568 aa18.39■□□□□ 0.53
VAPA-209ENST00000585042 ASNSP08243 561 aa18.39■□□□□ 0.53
VAPA-209ENST00000585042 OS9Q13438 667 aaPredicted RBP18.39■□□□□ 0.53
VAPA-209ENST00000585042 TREML2Q5T2D2 321 aa18.39■□□□□ 0.53
VAPA-209ENST00000585042 CERS3Q8IU89 383 aa18.39■□□□□ 0.53
VAPA-209ENST00000585042 ANKRD13CQ8N6S4 541 aa18.39■□□□□ 0.53
VAPA-209ENST00000585042 U2AF1L4Q8WU68 220 aaKnown RBP18.39■□□□□ 0.53
VAPA-209ENST00000585042 FAM196BA6NMK8 535 aa18.38■□□□□ 0.53
VAPA-209ENST00000585042 H0YGN5 161 aa18.38■□□□□ 0.53
VAPA-209ENST00000585042 ZBTB7BO15156 539 aaPredicted RBP18.38■□□□□ 0.53
VAPA-209ENST00000585042 CYP2E1P05181 493 aaPredicted RBP18.38■□□□□ 0.53
VAPA-209ENST00000585042 DPF3Q92784 378 aa18.38■□□□□ 0.53
VAPA-209ENST00000585042 DBNDD2Q9BQY9 259 aa18.38■□□□□ 0.53
VAPA-209ENST00000585042 AATFQ9NY61 560 aaKnown RBP eCLIP18.38■□□□□ 0.53
VAPA-209ENST00000585042 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.38■□□□□ 0.53
VAPA-209ENST00000585042 COLQQ9Y215 455 aaPredicted RBP18.38■□□□□ 0.53
VAPA-209ENST00000585042 C19orf81C9J6K1 198 aa18.37■□□□□ 0.53
VAPA-209ENST00000585042 HOXA7P31268 230 aaPredicted RBP18.37■□□□□ 0.53
VAPA-209ENST00000585042 HMGCS2P54868 508 aa18.37■□□□□ 0.53
VAPA-209ENST00000585042 CCDC84Q86UT8 332 aaPredicted RBP18.37■□□□□ 0.53
VAPA-209ENST00000585042 FTSJ3Q8IY81 847 aaKnown RBP18.37■□□□□ 0.53
VAPA-209ENST00000585042 TGFBRAP1Q8WUH2 860 aa18.37■□□□□ 0.53
VAPA-209ENST00000585042 UNC93B1Q9H1C4 597 aa18.37■□□□□ 0.53
VAPA-209ENST00000585042 SNRKQ9NRH2 765 aa18.37■□□□□ 0.53
VAPA-209ENST00000585042 INHAP05111 366 aa18.36■□□□□ 0.53
VAPA-209ENST00000585042 FXR1P51114 621 aaKnown RBP eCLIP18.36■□□□□ 0.53
VAPA-209ENST00000585042 BACE1P56817 501 aa18.36■□□□□ 0.53
VAPA-209ENST00000585042 RRP1BQ14684 758 aaKnown RBP18.36■□□□□ 0.53
VAPA-209ENST00000585042 ASCC2Q9H1I8 757 aaPredicted RBP18.36■□□□□ 0.53
VAPA-209ENST00000585042 MORF4L1Q9UBU8 362 aa18.36■□□□□ 0.53
VAPA-209ENST00000585042 NR2E3Q9Y5X4 410 aa18.36■□□□□ 0.53
VAPA-209ENST00000585042 LOC285556D6RIA3 1793 aa18.35■□□□□ 0.53
VAPA-209ENST00000585042 ZAP70P43403 619 aa18.35■□□□□ 0.53
VAPA-209ENST00000585042 TRIM34Q9BYJ4 488 aa18.35■□□□□ 0.53
VAPA-209ENST00000585042 PAK6Q9NQU5 681 aaPredicted RBP18.35■□□□□ 0.53
VAPA-209ENST00000585042 TMOD4Q9NZQ9 345 aa18.35■□□□□ 0.53
VAPA-209ENST00000585042 ATAD5Q96QE3 1844 aa18.35■□□□□ 0.53
VAPA-209ENST00000585042 CEP290O15078 2479 aa18.34■□□□□ 0.53
VAPA-209ENST00000585042 FLT1P17948 1338 aa18.34■□□□□ 0.53
VAPA-209ENST00000585042 FARP2O94887 1054 aaPredicted RBP18.34■□□□□ 0.53
VAPA-209ENST00000585042 TFRCP02786 760 aaKnown RBP18.34■□□□□ 0.53
VAPA-209ENST00000585042 ELNP15502 786 aa18.34■□□□□ 0.53
VAPA-209ENST00000585042 CRACR2BQ8N4Y2 399 aaPredicted RBP18.34■□□□□ 0.53
VAPA-209ENST00000585042 CRISPLD2Q9H0B8 497 aa18.34■□□□□ 0.53
VAPA-209ENST00000585042 GJD2Q9UKL4 321 aa18.34■□□□□ 0.53
VAPA-209ENST00000585042 MAST2Q6P0Q8 1798 aa18.33■□□□□ 0.53
VAPA-209ENST00000585042 USP17L10C9JJH3 530 aa18.33■□□□□ 0.52
VAPA-209ENST00000585042 HLA-DOAP06340 250 aa18.33■□□□□ 0.52
VAPA-209ENST00000585042 ADGRA1Q86SQ6 560 aa18.33■□□□□ 0.52
VAPA-209ENST00000585042 ERC1Q8IUD2 1116 aa18.33■□□□□ 0.52
VAPA-209ENST00000585042 MAPKAPK5Q8IW41 473 aa18.33■□□□□ 0.52
VAPA-209ENST00000585042 ITPRIPQ8IWB1 547 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms