RNA–Protein interactions for RNA: ENST00000584876.1

TRAPPC8-213, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-213ENST00000584876 FXR1P51114 621 aaKnown RBP eCLIP28.3■■■□□ 2.12
TRAPPC8-213ENST00000584876 CDK5RAP2Q96SN8 1893 aa28.29■■■□□ 2.12
TRAPPC8-213ENST00000584876 ADCY3O60266 1144 aa28.29■■■□□ 2.12
TRAPPC8-213ENST00000584876 UQCRFS1P1P0C7P4 283 aa28.29■■■□□ 2.12
TRAPPC8-213ENST00000584876 FLT3LGP49771 235 aa28.29■■■□□ 2.12
TRAPPC8-213ENST00000584876 TEX11Q8IYF3 940 aa28.29■■■□□ 2.12
TRAPPC8-213ENST00000584876 LRP2BPQ9P2M1 347 aa28.29■■■□□ 2.12
TRAPPC8-213ENST00000584876 TRIOBPQ9H2D6 2365 aa28.28■■■□□ 2.12
TRAPPC8-213ENST00000584876 SIPA1L1O43166 1804 aa28.28■■■□□ 2.12
TRAPPC8-213ENST00000584876 TREML2Q5T2D2 321 aa28.28■■■□□ 2.12
TRAPPC8-213ENST00000584876 DPF3Q92784 378 aa28.28■■■□□ 2.12
TRAPPC8-213ENST00000584876 UNC93B1Q9H1C4 597 aa28.28■■■□□ 2.12
TRAPPC8-213ENST00000584876 PNMA3Q9UL41 463 aa28.28■■■□□ 2.12
TRAPPC8-213ENST00000584876 MYO5AQ9Y4I1 1855 aaKnown RBP28.27■■■□□ 2.12
TRAPPC8-213ENST00000584876 ANKRD13CQ8N6S4 541 aa28.27■■■□□ 2.12
TRAPPC8-213ENST00000584876 PROCA1Q8NCQ7 364 aaPredicted RBP28.27■■■□□ 2.12
TRAPPC8-213ENST00000584876 NOL10Q9BSC4 688 aaKnown RBP28.27■■■□□ 2.12
TRAPPC8-213ENST00000584876 FOCADQ5VW36 1801 aa28.27■■■□□ 2.12
TRAPPC8-213ENST00000584876 ELNP15502 786 aa28.26■■■□□ 2.11
TRAPPC8-213ENST00000584876 SPP2Q13103 211 aa28.26■■■□□ 2.11
TRAPPC8-213ENST00000584876 UBE2Q1Q7Z7E8 422 aa28.26■■■□□ 2.11
TRAPPC8-213ENST00000584876 U2AF1L4Q8WU68 220 aaKnown RBP28.26■■■□□ 2.11
TRAPPC8-213ENST00000584876 INHAP05111 366 aa28.25■■■□□ 2.11
TRAPPC8-213ENST00000584876 IRF5Q13568 498 aa28.25■■■□□ 2.11
TRAPPC8-213ENST00000584876 ZNF280CQ8ND82 737 aa28.25■■■□□ 2.11
TRAPPC8-213ENST00000584876 PXYLP1Q8TE99 480 aa28.25■■■□□ 2.11
TRAPPC8-213ENST00000584876 SH3RF3Q8TEJ3 882 aaPredicted RBP28.25■■■□□ 2.11
TRAPPC8-213ENST00000584876 HTATIP2Q9BUP3 242 aa28.25■■■□□ 2.11
TRAPPC8-213ENST00000584876 TBC1D2Q9BYX2 928 aa28.25■■■□□ 2.11
TRAPPC8-213ENST00000584876 CAP2P40123 477 aa28.24■■■□□ 2.11
TRAPPC8-213ENST00000584876 FAM110CQ1W6H9 321 aa28.24■■■□□ 2.11
TRAPPC8-213ENST00000584876 TTC39AQ5SRH9 613 aa28.24■■■□□ 2.11
TRAPPC8-213ENST00000584876 TMEM57Q8N5G2 664 aa28.24■■■□□ 2.11
TRAPPC8-213ENST00000584876 COA7Q96BR5 231 aa28.24■■■□□ 2.11
TRAPPC8-213ENST00000584876 SNRKQ9NRH2 765 aa28.24■■■□□ 2.11
TRAPPC8-213ENST00000584876 HERC5Q9UII4 1024 aaKnown RBP28.24■■■□□ 2.11
TRAPPC8-213ENST00000584876 FARP2O94887 1054 aaPredicted RBP28.23■■■□□ 2.11
TRAPPC8-213ENST00000584876 HMGCS2P54868 508 aa28.23■■■□□ 2.11
TRAPPC8-213ENST00000584876 RRP1BQ14684 758 aaKnown RBP28.23■■■□□ 2.11
TRAPPC8-213ENST00000584876 NAA16Q6N069 864 aaPredicted RBP28.23■■■□□ 2.11
TRAPPC8-213ENST00000584876 TAOK2Q9UL54 1235 aa28.23■■■□□ 2.11
TRAPPC8-213ENST00000584876 USP17L5A8MUK1 530 aa28.22■■■□□ 2.11
TRAPPC8-213ENST00000584876 SGPL1O95470 568 aa28.22■■■□□ 2.11
TRAPPC8-213ENST00000584876 PABPC4Q13310 644 aaKnown RBP eCLIP28.22■■■□□ 2.11
TRAPPC8-213ENST00000584876 OS9Q13438 667 aaPredicted RBP28.22■■■□□ 2.11
TRAPPC8-213ENST00000584876 TNNI3KQ59H18 835 aa28.22■■■□□ 2.11
TRAPPC8-213ENST00000584876 ZKSCAN2Q63HK3 967 aa28.22■■■□□ 2.11
TRAPPC8-213ENST00000584876 CHRDL2Q6WN34 429 aa28.22■■■□□ 2.11
TRAPPC8-213ENST00000584876 GPR108Q9NPR9 543 aa28.22■■■□□ 2.11
TRAPPC8-213ENST00000584876 AATFQ9NY61 560 aaKnown RBP eCLIP28.22■■■□□ 2.11
TRAPPC8-213ENST00000584876 FPGT-TNNI3KV9GXZ4 949 aa28.22■■■□□ 2.11
TRAPPC8-213ENST00000584876 BAG3O95817 575 aa28.21■■■□□ 2.11
TRAPPC8-213ENST00000584876 POLA2Q14181 598 aa28.21■■■□□ 2.11
TRAPPC8-213ENST00000584876 CCDC158Q5M9N0 1113 aa28.21■■■□□ 2.11
TRAPPC8-213ENST00000584876 DBNDD2Q9BQY9 259 aa28.21■■■□□ 2.11
TRAPPC8-213ENST00000584876 AS3MTQ9HBK9 375 aa28.21■■■□□ 2.11
TRAPPC8-213ENST00000584876 PI4KBQ9UBF8 816 aa28.21■■■□□ 2.11
TRAPPC8-213ENST00000584876 PLCG2P16885 1265 aa28.2■■■□□ 2.1
TRAPPC8-213ENST00000584876 GCLCP48506 637 aaPredicted RBP28.2■■■□□ 2.1
TRAPPC8-213ENST00000584876 DHX36Q9H2U1 1008 aaKnown RBP28.2■■■□□ 2.1
TRAPPC8-213ENST00000584876 SSH3Q8TE77 659 aa28.19■■■□□ 2.1
TRAPPC8-213ENST00000584876 SH3D19Q5HYK7 790 aa28.18■■■□□ 2.1
TRAPPC8-213ENST00000584876 TGFBRAP1Q8WUH2 860 aa28.18■■■□□ 2.1
TRAPPC8-213ENST00000584876 DEFB118Q96PH6 123 aa28.18■■■□□ 2.1
TRAPPC8-213ENST00000584876 ASCC2Q9H1I8 757 aaPredicted RBP28.18■■■□□ 2.1
TRAPPC8-213ENST00000584876 TFRCP02786 760 aaKnown RBP28.17■■■□□ 2.1
TRAPPC8-213ENST00000584876 CYP2E1P05181 493 aaPredicted RBP28.17■■■□□ 2.1
TRAPPC8-213ENST00000584876 PPP4CP60510 307 aa28.17■■■□□ 2.1
TRAPPC8-213ENST00000584876 ATP8B2P98198 1209 aa28.17■■■□□ 2.1
TRAPPC8-213ENST00000584876 MAPKAPK5Q8IW41 473 aa28.17■■■□□ 2.1
TRAPPC8-213ENST00000584876 C1orf115Q9H7X2 142 aa28.17■■■□□ 2.1
TRAPPC8-213ENST00000584876 FLT1P17948 1338 aa28.17■■■□□ 2.1
TRAPPC8-213ENST00000584876 SURF6O75683 361 aaKnown RBP28.16■■■□□ 2.1
TRAPPC8-213ENST00000584876 ADGRA1Q86SQ6 560 aa28.16■■■□□ 2.1
TRAPPC8-213ENST00000584876 PAK6Q9NQU5 681 aaPredicted RBP28.16■■■□□ 2.1
TRAPPC8-213ENST00000584876 NR2E3Q9Y5X4 410 aa28.16■■■□□ 2.1
TRAPPC8-213ENST00000584876 MYH1P12882 1939 aa28.16■■■□□ 2.1
TRAPPC8-213ENST00000584876 PLXNB2O15031 1838 aa28.15■■■□□ 2.1
TRAPPC8-213ENST00000584876 ASNSP08243 561 aa28.15■■■□□ 2.1
TRAPPC8-213ENST00000584876 MTMR2Q13614 643 aa28.15■■■□□ 2.1
TRAPPC8-213ENST00000584876 WDR18Q9BV38 432 aa28.15■■■□□ 2.1
TRAPPC8-213ENST00000584876 TRIM34Q9BYJ4 488 aa28.15■■■□□ 2.1
TRAPPC8-213ENST00000584876 DNAJC18Q9H819 358 aa28.15■■■□□ 2.1
TRAPPC8-213ENST00000584876 RBM27Q9P2N5 1060 aaKnown RBP28.15■■■□□ 2.1
TRAPPC8-213ENST00000584876 ALPK3Q96L96 1907 aa28.14■■■□□ 2.1
TRAPPC8-213ENST00000584876 CAPN2P17655 700 aa28.14■■■□□ 2.1
TRAPPC8-213ENST00000584876 ZAP70P43403 619 aa28.14■■■□□ 2.1
TRAPPC8-213ENST00000584876 CRACR2BQ8N4Y2 399 aaPredicted RBP28.14■■■□□ 2.1
TRAPPC8-213ENST00000584876 ZNF512BQ96KM6 892 aaPredicted RBP28.14■■■□□ 2.1
TRAPPC8-213ENST00000584876 TMOD4Q9NZQ9 345 aa28.14■■■□□ 2.1
TRAPPC8-213ENST00000584876 IRX3P78415 501 aaPredicted RBP28.13■■■□□ 2.09
TRAPPC8-213ENST00000584876 FTSJ3Q8IY81 847 aaKnown RBP28.13■■■□□ 2.09
TRAPPC8-213ENST00000584876 PIH1D3Q9NQM4 214 aaKnown RBP28.13■■■□□ 2.09
TRAPPC8-213ENST00000584876 ZBTB7BO15156 539 aaPredicted RBP28.12■■■□□ 2.09
TRAPPC8-213ENST00000584876 HMGCRP04035 888 aa28.12■■■□□ 2.09
TRAPPC8-213ENST00000584876 BACE1P56817 501 aa28.12■■■□□ 2.09
TRAPPC8-213ENST00000584876 JAG1P78504 1218 aa28.12■■■□□ 2.09
TRAPPC8-213ENST00000584876 METTL16Q86W50 562 aaKnown RBP28.12■■■□□ 2.09
TRAPPC8-213ENST00000584876 FOXP4Q8IVH2 680 aaPredicted RBP28.12■■■□□ 2.09
TRAPPC8-213ENST00000584876 CRISPLD2Q9H0B8 497 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms