RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 C22orf23Q9BZE7 217 aa21.74■■□□□ 1.07
RFFL-211ENST00000584541 EHD4Q9H223 541 aa21.74■■□□□ 1.07
RFFL-211ENST00000584541 RNF41Q9H4P4 317 aaPredicted RBP21.74■■□□□ 1.07
RFFL-211ENST00000584541 ZNF287Q9HBT7 754 aa21.74■■□□□ 1.07
RFFL-211ENST00000584541 SERPINB13Q9UIV8 391 aa21.74■■□□□ 1.07
RFFL-211ENST00000584541 ROBO3Q96MS0 1386 aa21.74■■□□□ 1.07
RFFL-211ENST00000584541 ADM5C9JUS6 153 aa21.73■■□□□ 1.07
RFFL-211ENST00000584541 CTDSPL2Q05D32 466 aa21.73■■□□□ 1.07
RFFL-211ENST00000584541 PDE4BQ07343 736 aa21.73■■□□□ 1.07
RFFL-211ENST00000584541 HERC5Q9UII4 1024 aaKnown RBP21.73■■□□□ 1.07
RFFL-211ENST00000584541 PCP11498 1178 aaKnown RBP21.72■■□□□ 1.07
RFFL-211ENST00000584541 NF2P35240 595 aa21.72■■□□□ 1.07
RFFL-211ENST00000584541 C1QTNF8P60827 252 aa21.72■■□□□ 1.07
RFFL-211ENST00000584541 KRT32Q14532 448 aa21.72■■□□□ 1.07
RFFL-211ENST00000584541 MAP1SQ66K74 1059 aaPredicted RBP21.72■■□□□ 1.07
RFFL-211ENST00000584541 CHADLQ6NUI6 762 aa21.72■■□□□ 1.07
RFFL-211ENST00000584541 MFSD6Q6ZSS7 791 aa21.72■■□□□ 1.07
RFFL-211ENST00000584541 STK11IPQ8N1F8 1099 aa21.72■■□□□ 1.07
RFFL-211ENST00000584541 TEPSINQ96N21 525 aa21.72■■□□□ 1.07
RFFL-211ENST00000584541 GLIS2Q9BZE0 524 aaPredicted RBP21.72■■□□□ 1.07
RFFL-211ENST00000584541 SWAP70Q9UH65 585 aa21.72■■□□□ 1.07
RFFL-211ENST00000584541 AKNAD1Q5T1N1 836 aa21.71■■□□□ 1.07
RFFL-211ENST00000584541 NBPF12Q5TAG4 269 aaPredicted RBP21.71■■□□□ 1.07
RFFL-211ENST00000584541 DCAF15Q66K64 600 aa21.71■■□□□ 1.07
RFFL-211ENST00000584541 C16orf86Q6ZW13 317 aa21.71■■□□□ 1.07
RFFL-211ENST00000584541 STAG1Q8WVM7 1258 aa21.71■■□□□ 1.07
RFFL-211ENST00000584541 MKNK2Q9HBH9 465 aa21.71■■□□□ 1.07
RFFL-211ENST00000584541 ANAPC15P60006 121 aa21.7■■□□□ 1.06
RFFL-211ENST00000584541 TRDNQ13061 729 aa21.7■■□□□ 1.06
RFFL-211ENST00000584541 TSGA10IPQ3SY00 556 aa21.7■■□□□ 1.06
RFFL-211ENST00000584541 KCNB2Q92953 911 aa21.7■■□□□ 1.06
RFFL-211ENST00000584541 DYNLL2Q96FJ2 89 aa21.7■■□□□ 1.06
RFFL-211ENST00000584541 CNNM2Q9H8M5 875 aa21.7■■□□□ 1.06
RFFL-211ENST00000584541 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.7■■□□□ 1.06
RFFL-211ENST00000584541 TOMM22Q9NS69 142 aa21.7■■□□□ 1.06
RFFL-211ENST00000584541 KIF3CO14782 793 aa21.69■■□□□ 1.06
RFFL-211ENST00000584541 TBC1D12O60347 775 aa21.69■■□□□ 1.06
RFFL-211ENST00000584541 EVX2Q03828 476 aa21.69■■□□□ 1.06
RFFL-211ENST00000584541 GABPAQ06546 454 aa21.69■■□□□ 1.06
RFFL-211ENST00000584541 PRAMEF18Q5VWM3 479 aa21.69■■□□□ 1.06
RFFL-211ENST00000584541 METTL16Q86W50 562 aaKnown RBP21.69■■□□□ 1.06
RFFL-211ENST00000584541 TBC1D10CQ8IV04 446 aa21.69■■□□□ 1.06
RFFL-211ENST00000584541 CDAN1Q8IWY9 1227 aa21.69■■□□□ 1.06
RFFL-211ENST00000584541 CDCA5Q96FF9 252 aa21.69■■□□□ 1.06
RFFL-211ENST00000584541 NBPF3Q9H094 633 aa21.69■■□□□ 1.06
RFFL-211ENST00000584541 SNX14Q9Y5W7 946 aa21.69■■□□□ 1.06
RFFL-211ENST00000584541 E7EWF7 191 aa21.68■■□□□ 1.06
RFFL-211ENST00000584541 CDK8P49336 464 aa21.68■■□□□ 1.06
RFFL-211ENST00000584541 RBM25P49756 843 aaKnown RBP21.68■■□□□ 1.06
RFFL-211ENST00000584541 NT5C2P49902 561 aa21.68■■□□□ 1.06
RFFL-211ENST00000584541 RALYLQ86SE5 291 aaKnown RBP21.68■■□□□ 1.06
RFFL-211ENST00000584541 RASEFQ8IZ41 740 aa21.68■■□□□ 1.06
RFFL-211ENST00000584541 KRT23Q9C075 422 aa21.68■■□□□ 1.06
RFFL-211ENST00000584541 TRPM7Q96QT4 1865 aa21.68■■□□□ 1.06
RFFL-211ENST00000584541 SMIM22K7EJ46 135 aa21.67■■□□□ 1.06
RFFL-211ENST00000584541 RRP12Q5JTH9 1297 aaKnown RBP21.67■■□□□ 1.06
RFFL-211ENST00000584541 MIGA2Q7L4E1 593 aa21.67■■□□□ 1.06
RFFL-211ENST00000584541 ZNF444Q8N0Y2 327 aaPredicted RBP21.67■■□□□ 1.06
RFFL-211ENST00000584541 NCOA7Q8NI08 942 aa21.67■■□□□ 1.06
RFFL-211ENST00000584541 TBC1D32Q96NH3 1257 aa21.67■■□□□ 1.06
RFFL-211ENST00000584541 ZNF341Q9BYN7 854 aa21.67■■□□□ 1.06
RFFL-211ENST00000584541 ORC4O43929 436 aa21.66■■□□□ 1.06
RFFL-211ENST00000584541 FGRP09769 529 aa21.66■■□□□ 1.06
RFFL-211ENST00000584541 PSMA5P28066 241 aa21.66■■□□□ 1.06
RFFL-211ENST00000584541 MAP3K10Q02779 954 aa21.66■■□□□ 1.06
RFFL-211ENST00000584541 SLC44A5Q8NCS7 719 aa21.66■■□□□ 1.06
RFFL-211ENST00000584541 SMC1BQ8NDV3 1235 aa21.66■■□□□ 1.06
RFFL-211ENST00000584541 ESR2Q92731 530 aa21.66■■□□□ 1.06
RFFL-211ENST00000584541 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.66■■□□□ 1.06
RFFL-211ENST00000584541 ATAD5Q96QE3 1844 aa21.65■■□□□ 1.06
RFFL-211ENST00000584541 FAM196BA6NMK8 535 aa21.65■■□□□ 1.06
RFFL-211ENST00000584541 PPP1R12BO60237 982 aaPredicted RBP21.65■■□□□ 1.06
RFFL-211ENST00000584541 PRDM1O75626 825 aa21.65■■□□□ 1.06
RFFL-211ENST00000584541 TOMM70O94826 608 aa21.65■■□□□ 1.06
RFFL-211ENST00000584541 JAKMIP1Q96N16 626 aaKnown RBP21.65■■□□□ 1.06
RFFL-211ENST00000584541 NEK1Q96PY6 1258 aa21.65■■□□□ 1.06
RFFL-211ENST00000584541 DNAJC18Q9H819 358 aa21.65■■□□□ 1.06
RFFL-211ENST00000584541 TAF6LQ9Y6J9 622 aa21.65■■□□□ 1.06
RFFL-211ENST00000584541 NEDD4P46934 1319 aa21.64■■□□□ 1.05
RFFL-211ENST00000584541 RANBP6O60518 1105 aaKnown RBP21.64■■□□□ 1.05
RFFL-211ENST00000584541 HMGB1P09429 215 aaKnown RBP21.64■■□□□ 1.05
RFFL-211ENST00000584541 SHMT1P34896 483 aa21.64■■□□□ 1.05
RFFL-211ENST00000584541 CERKLQ49MI3 558 aaPredicted RBP21.64■■□□□ 1.05
RFFL-211ENST00000584541 TATDN1Q6P1N9 297 aa21.64■■□□□ 1.05
RFFL-211ENST00000584541 DLK2Q6UY11 383 aa21.64■■□□□ 1.05
RFFL-211ENST00000584541 STOX1Q6ZVD7 989 aa21.64■■□□□ 1.05
RFFL-211ENST00000584541 RBM46Q8TBY0 533 aaKnown RBP21.64■■□□□ 1.05
RFFL-211ENST00000584541 CCDC17Q96LX7 622 aa21.64■■□□□ 1.05
RFFL-211ENST00000584541 INCENPQ9NQS7 918 aa21.64■■□□□ 1.05
RFFL-211ENST00000584541 SSC5DA1L4H1 1573 aa21.64■■□□□ 1.05
RFFL-211ENST00000584541 TSPY2A6NKD2 308 aa21.63■■□□□ 1.05
RFFL-211ENST00000584541 B4E1Z4 1266 aa21.63■■□□□ 1.05
RFFL-211ENST00000584541 TRAF5O00463 557 aa21.63■■□□□ 1.05
RFFL-211ENST00000584541 TTLL12Q14166 644 aaPredicted RBP21.63■■□□□ 1.05
RFFL-211ENST00000584541 TM6SF1Q9BZW5 370 aa21.63■■□□□ 1.05
RFFL-211ENST00000584541 ZNF408Q9H9D4 720 aa21.63■■□□□ 1.05
RFFL-211ENST00000584541 TSPY3P0CV98 308 aa21.62■■□□□ 1.05
RFFL-211ENST00000584541 TSPY8P0CW00 308 aa21.62■■□□□ 1.05
RFFL-211ENST00000584541 SLURP2P0DP57 97 aa21.62■■□□□ 1.05
RFFL-211ENST00000584541 RASA1P20936 1047 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms