RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 ANKLE1Q8NAG6 615 aa8□□□□□ -1.13
CTC1-212ENST00000584439 CFAP53Q96M91 514 aa8□□□□□ -1.13
CTC1-212ENST00000584439 WRNIP1Q96S55 665 aa8□□□□□ -1.13
CTC1-212ENST00000584439 GREM2Q9H772 168 aa8□□□□□ -1.13
CTC1-212ENST00000584439 VRTNQ9H8Y1 702 aa8□□□□□ -1.13
CTC1-212ENST00000584439 MYH13Q9UKX3 1938 aa7.99□□□□□ -1.13
CTC1-212ENST00000584439 DOCK2Q92608 1830 aa7.99□□□□□ -1.13
CTC1-212ENST00000584439 ATAD5Q96QE3 1844 aa7.99□□□□□ -1.13
CTC1-212ENST00000584439 INPP5BP32019 993 aa7.99□□□□□ -1.13
CTC1-212ENST00000584439 CLK2P49760 499 aaKnown RBP7.99□□□□□ -1.13
CTC1-212ENST00000584439 PTGDRQ13258 359 aa7.99□□□□□ -1.13
CTC1-212ENST00000584439 TRIM28Q13263 835 aaKnown RBP7.99□□□□□ -1.13
CTC1-212ENST00000584439 GRIN2CQ14957 1233 aa7.99□□□□□ -1.13
CTC1-212ENST00000584439 PPM1EQ8WY54 764 aa7.99□□□□□ -1.13
CTC1-212ENST00000584439 LRFN3Q9BTN0 628 aa7.99□□□□□ -1.13
CTC1-212ENST00000584439 BSDC1Q9NW68 430 aaPredicted RBP7.99□□□□□ -1.13
CTC1-212ENST00000584439 COL6A1P12109 1028 aa7.98□□□□□ -1.13
CTC1-212ENST00000584439 GRIK5Q16478 980 aa7.98□□□□□ -1.13
CTC1-212ENST00000584439 TTLL11Q8NHH1 800 aa7.98□□□□□ -1.13
CTC1-212ENST00000584439 MRRFQ96E11 262 aaKnown RBP7.98□□□□□ -1.13
CTC1-212ENST00000584439 UHRF1Q96T88 793 aaPredicted RBP7.98□□□□□ -1.13
CTC1-212ENST00000584439 EPHX3Q9H6B9 360 aa7.98□□□□□ -1.13
CTC1-212ENST00000584439 OGDHLQ9ULD0 1010 aa7.98□□□□□ -1.13
CTC1-212ENST00000584439 NUDCQ9Y266 331 aa7.98□□□□□ -1.13
CTC1-212ENST00000584439 DOCK1Q14185 1865 aa7.98□□□□□ -1.13
CTC1-212ENST00000584439 TNPO2O14787 897 aaKnown RBP7.97□□□□□ -1.13
CTC1-212ENST00000584439 GALR2O43603 387 aaPredicted RBP7.97□□□□□ -1.13
CTC1-212ENST00000584439 PCCAP05165 728 aaPredicted RBP7.97□□□□□ -1.13
CTC1-212ENST00000584439 NFE2L2Q16236 605 aa7.97□□□□□ -1.13
CTC1-212ENST00000584439 TMEM259Q4ZIN3 620 aa7.97□□□□□ -1.13
CTC1-212ENST00000584439 HDGFL1Q5TGJ6 251 aa7.97□□□□□ -1.13
CTC1-212ENST00000584439 MIGA2Q7L4E1 593 aa7.97□□□□□ -1.13
CTC1-212ENST00000584439 DHX37Q8IY37 1157 aaKnown RBP7.97□□□□□ -1.13
CTC1-212ENST00000584439 DCBLD2Q96PD2 775 aa7.97□□□□□ -1.13
CTC1-212ENST00000584439 ASB2Q96Q27 587 aa7.97□□□□□ -1.13
CTC1-212ENST00000584439 PHOX2BQ99453 314 aa7.97□□□□□ -1.13
CTC1-212ENST00000584439 MYD88Q99836 296 aa7.97□□□□□ -1.13
CTC1-212ENST00000584439 KCNH4Q9UQ05 1017 aa7.97□□□□□ -1.13
CTC1-212ENST00000584439 LEMD3Q9Y2U8 911 aa7.97□□□□□ -1.13
CTC1-212ENST00000584439 TRIOO75962 3097 aa7.97□□□□□ -1.13
CTC1-212ENST00000584439 TAF5LO75529 589 aa7.96□□□□□ -1.14
CTC1-212ENST00000584439 CTSWP56202 376 aa7.96□□□□□ -1.14
CTC1-212ENST00000584439 PPATQ06203 517 aa7.96□□□□□ -1.14
CTC1-212ENST00000584439 POTEEQ6S8J3 1075 aa7.96□□□□□ -1.14
CTC1-212ENST00000584439 DZIP1LQ8IYY4 767 aaKnown RBP7.96□□□□□ -1.14
CTC1-212ENST00000584439 DDX12PQ92771 950 aa7.96□□□□□ -1.14
CTC1-212ENST00000584439 PHAXQ9H814 394 aaKnown RBP7.96□□□□□ -1.14
CTC1-212ENST00000584439 LOC285556D6RIA3 1793 aa7.96□□□□□ -1.14
CTC1-212ENST00000584439 SMCHD1A6NHR9 2005 aa7.96□□□□□ -1.14
CTC1-212ENST00000584439 LRRC37A2A6NM11 1700 aa7.95□□□□□ -1.14
CTC1-212ENST00000584439 MAP3K13O43283 966 aa7.95□□□□□ -1.14
CTC1-212ENST00000584439 IL1R1P14778 569 aa7.95□□□□□ -1.14
CTC1-212ENST00000584439 CAPN2P17655 700 aa7.95□□□□□ -1.14
CTC1-212ENST00000584439 TNFAIP1Q13829 316 aa7.95□□□□□ -1.14
CTC1-212ENST00000584439 TRIB2Q92519 343 aa7.95□□□□□ -1.14
CTC1-212ENST00000584439 KHSRPQ92945 711 aaKnown RBP eCLIP7.95□□□□□ -1.14
CTC1-212ENST00000584439 CDC5LQ99459 802 aaKnown RBP7.95□□□□□ -1.14
CTC1-212ENST00000584439 PARK7Q99497 189 aaKnown RBP7.95□□□□□ -1.14
CTC1-212ENST00000584439 HMX1Q9NP08 348 aaPredicted RBP7.95□□□□□ -1.14
CTC1-212ENST00000584439 C11orf16Q9NQ32 467 aa7.95□□□□□ -1.14
CTC1-212ENST00000584439 TTF2Q9UNY4 1162 aaKnown RBP7.95□□□□□ -1.14
CTC1-212ENST00000584439 FAM86C2PA6NEL3 165 aa7.94□□□□□ -1.14
CTC1-212ENST00000584439 HMGCRP04035 888 aa7.94□□□□□ -1.14
CTC1-212ENST00000584439 SMAD3P84022 425 aaKnown RBP7.94□□□□□ -1.14
CTC1-212ENST00000584439 CHRNDQ07001 517 aa7.94□□□□□ -1.14
CTC1-212ENST00000584439 PDE3AQ14432 1141 aa7.94□□□□□ -1.14
CTC1-212ENST00000584439 CCDC85BQ15834 202 aaPredicted RBP7.94□□□□□ -1.14
CTC1-212ENST00000584439 RIC3Q7Z5B4 369 aa7.94□□□□□ -1.14
CTC1-212ENST00000584439 ANKRD13CQ8N6S4 541 aa7.94□□□□□ -1.14
CTC1-212ENST00000584439 ATXN2LQ8WWM7 1075 aaKnown RBP7.94□□□□□ -1.14
CTC1-212ENST00000584439 LBHD1Q9BQE6 289 aaPredicted RBP7.94□□□□□ -1.14
CTC1-212ENST00000584439 FAM217BQ9NTX9 383 aaPredicted RBP7.94□□□□□ -1.14
CTC1-212ENST00000584439 GJD2Q9UKL4 321 aa7.94□□□□□ -1.14
CTC1-212ENST00000584439 HCN4Q9Y3Q4 1203 aa7.94□□□□□ -1.14
CTC1-212ENST00000584439 CDK5RAP2Q96SN8 1893 aa7.94□□□□□ -1.14
CTC1-212ENST00000584439 SMARCA5O60264 1052 aaPredicted RBP7.93□□□□□ -1.14
CTC1-212ENST00000584439 PEX10O60683 326 aa7.93□□□□□ -1.14
CTC1-212ENST00000584439 SLURP2P0DP57 97 aa7.93□□□□□ -1.14
CTC1-212ENST00000584439 CCND3P30281 292 aaPredicted RBP7.93□□□□□ -1.14
CTC1-212ENST00000584439 CRKP46108 304 aa7.93□□□□□ -1.14
CTC1-212ENST00000584439 MRE11P49959 708 aa7.93□□□□□ -1.14
CTC1-212ENST00000584439 ATN1P54259 1190 aaPredicted RBP7.93□□□□□ -1.14
CTC1-212ENST00000584439 EPHB4P54760 987 aa7.93□□□□□ -1.14
CTC1-212ENST00000584439 FKBP1AP62942 108 aaKnown RBP7.93□□□□□ -1.14
CTC1-212ENST00000584439 DDX10Q13206 875 aaKnown RBP7.93□□□□□ -1.14
CTC1-212ENST00000584439 CCDC191Q8NCU4 936 aa7.93□□□□□ -1.14
CTC1-212ENST00000584439 BADQ92934 168 aa7.93□□□□□ -1.14
CTC1-212ENST00000584439 PHF12Q96QT6 1004 aa7.93□□□□□ -1.14
CTC1-212ENST00000584439 C1QTNF1Q9BXJ1 281 aa7.93□□□□□ -1.14
CTC1-212ENST00000584439 CWC25Q9NXE8 425 aaPredicted RBP7.93□□□□□ -1.14
CTC1-212ENST00000584439 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.93□□□□□ -1.14
CTC1-212ENST00000584439 THEGQ9P2T0 379 aa7.93□□□□□ -1.14
CTC1-212ENST00000584439 SPTBN4Q9H254 2564 aa7.93□□□□□ -1.14
CTC1-212ENST00000584439 ZNFX1Q9P2E3 1918 aaKnown RBP7.92□□□□□ -1.14
CTC1-212ENST00000584439 MYH2Q9UKX2 1941 aa7.92□□□□□ -1.14
CTC1-212ENST00000584439 BMP1P13497 986 aa7.92□□□□□ -1.14
CTC1-212ENST00000584439 KCNJ4P48050 445 aa7.92□□□□□ -1.14
CTC1-212ENST00000584439 TNNI2P48788 182 aa7.92□□□□□ -1.14
CTC1-212ENST00000584439 MRPS5P82675 430 aaKnown RBP7.92□□□□□ -1.14
CTC1-212ENST00000584439 TFF2Q03403 129 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms