RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 TRIM58Q8NG06 486 aa14.52□□□□□ -0.08
RNF43-208ENST00000584437 MAIP1Q8WWC4 291 aa14.52□□□□□ -0.08
RNF43-208ENST00000584437 ODF2LQ9ULJ1 636 aa14.52□□□□□ -0.08
RNF43-208ENST00000584437 SNX16P57768 344 aa14.52□□□□□ -0.09
RNF43-208ENST00000584437 FBXO31Q5XUX0 539 aaPredicted RBP14.52□□□□□ -0.09
RNF43-208ENST00000584437 FAM71BQ8TC56 605 aa14.52□□□□□ -0.09
RNF43-208ENST00000584437 ASIC3Q9UHC3 531 aa14.52□□□□□ -0.09
RNF43-208ENST00000584437 ZNF215Q9UL58 517 aaPredicted RBP14.52□□□□□ -0.09
RNF43-208ENST00000584437 KIF24Q5T7B8 1368 aa14.52□□□□□ -0.09
RNF43-208ENST00000584437 RNASE9P60153 205 aaKnown RBP14.52□□□□□ -0.09
RNF43-208ENST00000584437 GNGT1P63211 74 aa14.52□□□□□ -0.09
RNF43-208ENST00000584437 PPP2R5EQ16537 467 aa14.52□□□□□ -0.09
RNF43-208ENST00000584437 LGSNQ5TDP6 509 aa14.52□□□□□ -0.09
RNF43-208ENST00000584437 ADALQ6DHV7 355 aa14.52□□□□□ -0.09
RNF43-208ENST00000584437 MIGA1Q8NAN2 632 aa14.52□□□□□ -0.09
RNF43-208ENST00000584437 GLT8D2Q9H1C3 349 aa14.52□□□□□ -0.09
RNF43-208ENST00000584437 RABEP2Q9H5N1 569 aa14.52□□□□□ -0.09
RNF43-208ENST00000584437 AGTPBP1Q9UPW5 1226 aa14.52□□□□□ -0.09
RNF43-208ENST00000584437 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.52□□□□□ -0.091e-6■■□□□ 13.6
RNF43-208ENST00000584437 CAPN7Q9Y6W3 813 aa14.52□□□□□ -0.09
RNF43-208ENST00000584437 STX10O60499 249 aa14.52□□□□□ -0.09
RNF43-208ENST00000584437 ST5P78524 1137 aa14.52□□□□□ -0.09
RNF43-208ENST00000584437 SLC39A6Q13433 755 aa14.52□□□□□ -0.09
RNF43-208ENST00000584437 DENND2CQ68D51 928 aa14.52□□□□□ -0.09
RNF43-208ENST00000584437 ZNF354CQ86Y25 554 aa14.52□□□□□ -0.09
RNF43-208ENST00000584437 ZCRB1Q8TBF4 217 aaKnown RBP14.52□□□□□ -0.09
RNF43-208ENST00000584437 APPBP2Q92624 585 aa14.52□□□□□ -0.09
RNF43-208ENST00000584437 ARHGEF12Q9NZN5 1544 aa14.51□□□□□ -0.09
RNF43-208ENST00000584437 MBD4O95243 580 aa14.51□□□□□ -0.09
RNF43-208ENST00000584437 RAB3IPQ96QF0 476 aaPredicted RBP14.51□□□□□ -0.09
RNF43-208ENST00000584437 NUF2Q9BZD4 464 aa14.51□□□□□ -0.09
RNF43-208ENST00000584437 B4DLN1 442 aa14.51□□□□□ -0.09
RNF43-208ENST00000584437 B4E1Z4 1266 aa14.51□□□□□ -0.09
RNF43-208ENST00000584437 PHF23Q9BUL5 403 aaPredicted RBP14.51□□□□□ -0.09
RNF43-208ENST00000584437 TRIM31Q9BZY9 425 aa14.51□□□□□ -0.09
RNF43-208ENST00000584437 KIAA1468Q9P260 1216 aa14.51□□□□□ -0.09
RNF43-208ENST00000584437 BCAP29Q9UHQ4 241 aa14.51□□□□□ -0.09
RNF43-208ENST00000584437 DDX41Q9UJV9 622 aaKnown RBP14.51□□□□□ -0.09
RNF43-208ENST00000584437 KDM5BQ9UGL1 1544 aa14.51□□□□□ -0.09
RNF43-208ENST00000584437 PER1O15534 1290 aaPredicted RBP14.51□□□□□ -0.09
RNF43-208ENST00000584437 APBA1Q02410 837 aa14.51□□□□□ -0.09
RNF43-208ENST00000584437 TNNI3KQ59H18 835 aa14.51□□□□□ -0.09
RNF43-208ENST00000584437 IFIH1Q9BYX4 1025 aaKnown RBP14.51□□□□□ -0.09
RNF43-208ENST00000584437 FPGT-TNNI3KV9GXZ4 949 aa14.51□□□□□ -0.09
RNF43-208ENST00000584437 HOXB7P09629 217 aa14.51□□□□□ -0.09
RNF43-208ENST00000584437 MRPS9P82933 396 aaKnown RBP14.51□□□□□ -0.09
RNF43-208ENST00000584437 KLHL30Q0D2K2 578 aa14.51□□□□□ -0.09
RNF43-208ENST00000584437 NCOA5Q9HCD5 579 aaKnown RBP14.51□□□□□ -0.09
RNF43-208ENST00000584437 PSDA5PKW4 1024 aaPredicted RBP14.5□□□□□ -0.09
RNF43-208ENST00000584437 I3L4J1 428 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 GAS8O95995 478 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 PIK3AP1Q6ZUJ8 805 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 AFAP1L2Q8N4X5 818 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 DDX21Q9NR30 783 aaKnown RBP eCLIP14.5□□□□□ -0.09
RNF43-208ENST00000584437 SFMBT2Q5VUG0 894 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 ANKRD20A3Q5VUR7 823 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 KRT40Q6A162 431 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 PEX26Q7Z412 305 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 NELFBQ8WX92 580 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 PHACTR3Q96KR7 559 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 IRX4P78413 519 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 KRT24Q2M2I5 525 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 PHLDB3Q6NSJ2 640 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 OR8K1Q8NGG5 319 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 HOMER3Q9NSC5 361 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 KRT5P13647 590 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 CAPS2Q9BXY5 557 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 CTTNBP2NLQ9P2B4 639 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 HIP1RO75146 1068 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 DMTNQ08495 405 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 BEND3Q5T5X7 828 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 MAPK8IP1Q9UQF2 711 aa14.5□□□□□ -0.09
RNF43-208ENST00000584437 GPATCH8Q9UKJ3 1502 aaKnown RBP14.49□□□□□ -0.09
RNF43-208ENST00000584437 EYA2O00167 538 aa14.49□□□□□ -0.09
RNF43-208ENST00000584437 ITIH3Q06033 890 aa14.49□□□□□ -0.09
RNF43-208ENST00000584437 NCBP1Q09161 790 aaKnown RBP14.49□□□□□ -0.09
RNF43-208ENST00000584437 TRPC3Q13507 836 aa14.49□□□□□ -0.09
RNF43-208ENST00000584437 LRRC8AQ8IWT6 810 aa14.49□□□□□ -0.09
RNF43-208ENST00000584437 MICAL1Q8TDZ2 1067 aa14.49□□□□□ -0.09
RNF43-208ENST00000584437 PPP2R2CQ9Y2T4 447 aa14.49□□□□□ -0.09
RNF43-208ENST00000584437 RGS16O15492 202 aaPredicted RBP14.49□□□□□ -0.09
RNF43-208ENST00000584437 SEPT14Q6ZU15 432 aa14.49□□□□□ -0.09
RNF43-208ENST00000584437 FNBP1Q96RU3 617 aa14.49□□□□□ -0.09
RNF43-208ENST00000584437 HYOU1Q9Y4L1 999 aa14.49□□□□□ -0.09
RNF43-208ENST00000584437 DUOX2Q9NRD8 1548 aa14.49□□□□□ -0.09
RNF43-208ENST00000584437 RFC4P35249 363 aa14.49□□□□□ -0.09
RNF43-208ENST00000584437 MAP3K21Q5TCX8 1036 aa14.49□□□□□ -0.09
RNF43-208ENST00000584437 KBTBD3Q8NAB2 608 aa14.49□□□□□ -0.09
RNF43-208ENST00000584437 GABPB2Q8TAK5 448 aaPredicted RBP14.49□□□□□ -0.09
RNF43-208ENST00000584437 GBP5Q96PP8 586 aa14.49□□□□□ -0.09
RNF43-208ENST00000584437 NPATQ14207 1427 aa14.49□□□□□ -0.09
RNF43-208ENST00000584437 IRS4O14654 1257 aaPredicted RBP14.49□□□□□ -0.09
RNF43-208ENST00000584437 PICALMQ13492 652 aa14.49□□□□□ -0.09
RNF43-208ENST00000584437 SETDB2Q96T68 719 aa14.49□□□□□ -0.09
RNF43-208ENST00000584437 PPANQ9NQ55 473 aaKnown RBP14.49□□□□□ -0.09
RNF43-208ENST00000584437 CTNNA1P35221 906 aaKnown RBP14.48□□□□□ -0.09
RNF43-208ENST00000584437 LONRF3Q496Y0 759 aa14.48□□□□□ -0.09
RNF43-208ENST00000584437 CCDC105Q8IYK2 499 aa14.48□□□□□ -0.09
RNF43-208ENST00000584437 ANKRD2Q9GZV1 360 aa14.48□□□□□ -0.09
RNF43-208ENST00000584437 HAUS4Q9H6D7 363 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms