RNA–Protein interactions for RNA: ENST00000584328.1

NF1-223, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-223ENST00000584328 ADMP35318 185 aa8.08□□□□□ -1.12
NF1-223ENST00000584328 GRIK1P39086 918 aa8.08□□□□□ -1.12
NF1-223ENST00000584328 CD97P48960 835 aa8.08□□□□□ -1.12
NF1-223ENST00000584328 LLGL2Q6P1M3 1020 aa8.08□□□□□ -1.12
NF1-223ENST00000584328 SHISA5Q8N114 240 aa8.08□□□□□ -1.12
NF1-223ENST00000584328 OSBPL1AQ9BXW6 950 aa8.08□□□□□ -1.12
NF1-223ENST00000584328 LGR6Q9HBX8 967 aa8.08□□□□□ -1.12
NF1-223ENST00000584328 DISC1Q9NRI5 854 aa8.08□□□□□ -1.12
NF1-223ENST00000584328 FMN1Q68DA7 1419 aa8.08□□□□□ -1.12
NF1-223ENST00000584328 MED26O95402 600 aa8.07□□□□□ -1.12
NF1-223ENST00000584328 PSMD2Q13200 908 aa8.07□□□□□ -1.12
NF1-223ENST00000584328 LRRC14Q15048 493 aa8.07□□□□□ -1.12
NF1-223ENST00000584328 RASIP1Q5U651 963 aa8.07□□□□□ -1.12
NF1-223ENST00000584328 PCNX4Q63HM2 1172 aa8.07□□□□□ -1.12
NF1-223ENST00000584328 SV2BQ7L1I2 683 aa8.07□□□□□ -1.12
NF1-223ENST00000584328 FBXO33Q7Z6M2 555 aa8.07□□□□□ -1.12
NF1-223ENST00000584328 ZAR1Q86SH2 424 aa8.07□□□□□ -1.12
NF1-223ENST00000584328 NBPF11Q86T75 865 aa8.07□□□□□ -1.12
NF1-223ENST00000584328 DYNC1LI2O43237 492 aaPredicted RBP8.06□□□□□ -1.12
NF1-223ENST00000584328 TRIM37O94972 964 aa8.06□□□□□ -1.12
NF1-223ENST00000584328 ERCC3P19447 782 aa8.06□□□□□ -1.12
NF1-223ENST00000584328 DAB2P98082 770 aa8.06□□□□□ -1.12
NF1-223ENST00000584328 XPCQ01831 940 aaPredicted RBP8.06□□□□□ -1.12
NF1-223ENST00000584328 TTLL4Q14679 1199 aa8.06□□□□□ -1.12
NF1-223ENST00000584328 ZC3H12AQ5D1E8 599 aaKnown RBP8.06□□□□□ -1.12
NF1-223ENST00000584328 INTS5Q6P9B9 1019 aaKnown RBP8.06□□□□□ -1.12
NF1-223ENST00000584328 GATA6Q92908 595 aa8.06□□□□□ -1.12
NF1-223ENST00000584328 CACNA2D2Q9NY47 1150 aa8.06□□□□□ -1.12
NF1-223ENST00000584328 PIM2Q9P1W9 311 aa8.06□□□□□ -1.12
NF1-223ENST00000584328 CYP8B1Q9UNU6 501 aa8.06□□□□□ -1.12
NF1-223ENST00000584328 LEMD3Q9Y2U8 911 aa8.06□□□□□ -1.12
NF1-223ENST00000584328 RAPGEF6Q8TEU7 1601 aa8.06□□□□□ -1.12
NF1-223ENST00000584328 CASKIN1Q8WXD9 1431 aa8.05□□□□□ -1.12
NF1-223ENST00000584328 FAM170BA6NMN3 283 aa8.05□□□□□ -1.12
NF1-223ENST00000584328 RNGTTO60942 597 aaKnown RBP8.05□□□□□ -1.12
NF1-223ENST00000584328 HCLS1P14317 486 aaPredicted RBP8.05□□□□□ -1.12
NF1-223ENST00000584328 SEZ6L2Q6UXD5 910 aa8.05□□□□□ -1.12
NF1-223ENST00000584328 SMYD4Q8IYR2 804 aaPredicted RBP8.05□□□□□ -1.12
NF1-223ENST00000584328 METTL22Q9BUU2 404 aaPredicted RBP8.05□□□□□ -1.12
NF1-223ENST00000584328 C1GALT1Q9NS00 363 aa8.05□□□□□ -1.12
NF1-223ENST00000584328 ATP10BO94823 1461 aa8.05□□□□□ -1.12
NF1-223ENST00000584328 ERVK-24P63145 666 aa8.04□□□□□ -1.12
NF1-223ENST00000584328 TAGLNQ01995 201 aaKnown RBP8.04□□□□□ -1.12
NF1-223ENST00000584328 CCDC85BQ15834 202 aaPredicted RBP8.04□□□□□ -1.12
NF1-223ENST00000584328 CPSF6Q16630 551 aaKnown RBP eCLIP8.04□□□□□ -1.12
NF1-223ENST00000584328 FAM161BQ96MY7 647 aa8.04□□□□□ -1.12
NF1-223ENST00000584328 PCF11O94913 1555 aaKnown RBP8.03□□□□□ -1.12
NF1-223ENST00000584328 FYCO1Q9BQS8 1478 aa8.03□□□□□ -1.12
NF1-223ENST00000584328 KIAA1324LA8MWY0 1029 aaPredicted RBP8.03□□□□□ -1.12
NF1-223ENST00000584328 NEFMP07197 916 aa8.03□□□□□ -1.12
NF1-223ENST00000584328 HOXA10P31260 410 aaPredicted RBP8.03□□□□□ -1.12
NF1-223ENST00000584328 MEI1Q5TIA1 1274 aa8.03□□□□□ -1.12
NF1-223ENST00000584328 SCARA3Q6AZY7 606 aa8.03□□□□□ -1.12
NF1-223ENST00000584328 TTBK2Q6IQ55 1244 aa8.03□□□□□ -1.12
NF1-223ENST00000584328 TMC4Q7Z404 712 aa8.03□□□□□ -1.12
NF1-223ENST00000584328 PCDHA4Q9UN74 947 aa8.03□□□□□ -1.12
NF1-223ENST00000584328 CSADQ9Y600 493 aa8.03□□□□□ -1.12
NF1-223ENST00000584328 ZCCHC11Q5TAX3 1644 aaKnown RBP8.03□□□□□ -1.12
NF1-223ENST00000584328 ABCC10Q5T3U5 1492 aa8.02□□□□□ -1.13
NF1-223ENST00000584328 ZBTB7CA1YPR0 619 aa8.02□□□□□ -1.13
NF1-223ENST00000584328 DCDC2CA8MYV0 355 aa8.02□□□□□ -1.13
NF1-223ENST00000584328 FOSL1P15407 271 aa8.02□□□□□ -1.13
NF1-223ENST00000584328 CYP27A1Q02318 531 aa8.02□□□□□ -1.13
NF1-223ENST00000584328 DUSP27Q5VZP5 1158 aa8.02□□□□□ -1.13
NF1-223ENST00000584328 ZNF765Q7L2R6 523 aa8.02□□□□□ -1.13
NF1-223ENST00000584328 RNF214Q8ND24 703 aa8.02□□□□□ -1.13
NF1-223ENST00000584328 SSU72Q9NP77 194 aaKnown RBP8.02□□□□□ -1.13
NF1-223ENST00000584328 PCOLCE2Q9UKZ9 415 aa8.02□□□□□ -1.13
NF1-223ENST00000584328 HECW1Q76N89 1606 aa8.02□□□□□ -1.13
NF1-223ENST00000584328 EPRSP07814 1512 aaKnown RBP8.02□□□□□ -1.13
NF1-223ENST00000584328 ASXL2Q76L83 1435 aa8.02□□□□□ -1.13
NF1-223ENST00000584328 VPS8Q8N3P4 1428 aa8.02□□□□□ -1.13
NF1-223ENST00000584328 CYP26A1O43174 497 aa8.01□□□□□ -1.13
NF1-223ENST00000584328 SPINK2P20155 84 aa8.01□□□□□ -1.13
NF1-223ENST00000584328 RANGAP1P46060 587 aaPredicted RBP8.01□□□□□ -1.13
NF1-223ENST00000584328 CDK5R2Q13319 367 aa8.01□□□□□ -1.13
NF1-223ENST00000584328 PPM1JQ5JR12 505 aa8.01□□□□□ -1.13
NF1-223ENST00000584328 C12orf40Q86WS4 652 aa8.01□□□□□ -1.13
NF1-223ENST00000584328 ISL2Q96A47 359 aa8.01□□□□□ -1.13
NF1-223ENST00000584328 PICK1Q9NRD5 415 aa8.01□□□□□ -1.13
NF1-223ENST00000584328 WDR7Q9Y4E6 1490 aa8□□□□□ -1.13
NF1-223ENST00000584328 PTPN11Q06124 597 aaPredicted RBP8□□□□□ -1.13
NF1-223ENST00000584328 MAP3K11Q16584 847 aa8□□□□□ -1.13
NF1-223ENST00000584328 OGFOD3Q6PK18 319 aa8□□□□□ -1.13
NF1-223ENST00000584328 DTX1Q86Y01 620 aa8□□□□□ -1.13
NF1-223ENST00000584328 PHF6Q8IWS0 365 aaKnown RBP eCLIP8□□□□□ -1.13
NF1-223ENST00000584328 HOMEZQ8IX15 550 aa8□□□□□ -1.13
NF1-223ENST00000584328 ELMO3Q96BJ8 720 aa8□□□□□ -1.13
NF1-223ENST00000584328 MRS2Q9HD23 443 aa8□□□□□ -1.13
NF1-223ENST00000584328 GLI2P10070 1586 aa8□□□□□ -1.13
NF1-223ENST00000584328 DIP2BQ9P265 1576 aa8□□□□□ -1.13
NF1-223ENST00000584328 SORBS3O60504 671 aa7.99□□□□□ -1.13
NF1-223ENST00000584328 CTSHP09668 335 aa7.99□□□□□ -1.13
NF1-223ENST00000584328 LMNB1P20700 586 aa7.99□□□□□ -1.13
NF1-223ENST00000584328 RPS26P62854 115 aaKnown RBP7.99□□□□□ -1.13
NF1-223ENST00000584328 TAF1CQ15572 869 aaPredicted RBP7.99□□□□□ -1.13
NF1-223ENST00000584328 LRRC4CQ9HCJ2 640 aa7.99□□□□□ -1.13
NF1-223ENST00000584328 CCDC18Q5T9S5 1454 aa7.99□□□□□ -1.13
NF1-223ENST00000584328 CDK13Q14004 1512 aaKnown RBP7.98□□□□□ -1.13
NF1-223ENST00000584328 LRRIQ1Q96JM4 1722 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms