RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 ZNF784Q8NCA9 323 aaPredicted RBP13.85□□□□□ -0.19
CDRT1-207ENST00000583965 ZNF287Q9HBT7 754 aa13.85□□□□□ -0.19
CDRT1-207ENST00000583965 SWAP70Q9UH65 585 aa13.85□□□□□ -0.19
CDRT1-207ENST00000583965 HERC5Q9UII4 1024 aaKnown RBP13.85□□□□□ -0.19
CDRT1-207ENST00000583965 SERPINB13Q9UIV8 391 aa13.85□□□□□ -0.19
CDRT1-207ENST00000583965 MYH4Q9Y623 1939 aa13.85□□□□□ -0.19
CDRT1-207ENST00000583965 OTOFQ9HC10 1997 aa13.85□□□□□ -0.19
CDRT1-207ENST00000583965 GREB1LQ9C091 1923 aaPredicted RBP13.84□□□□□ -0.19
CDRT1-207ENST00000583965 PAPPA2Q9BXP8 1791 aa13.84□□□□□ -0.19
CDRT1-207ENST00000583965 SLC27A2O14975 620 aa13.84□□□□□ -0.19
CDRT1-207ENST00000583965 CYP21A2P08686 494 aa13.84□□□□□ -0.19
CDRT1-207ENST00000583965 CYP2D6P10635 497 aa13.84□□□□□ -0.19
CDRT1-207ENST00000583965 ZKSCAN1P17029 563 aaPredicted RBP13.84□□□□□ -0.19
CDRT1-207ENST00000583965 NT5C2P49902 561 aa13.84□□□□□ -0.19
CDRT1-207ENST00000583965 MAP3K10Q02779 954 aa13.84□□□□□ -0.19
CDRT1-207ENST00000583965 GABPAQ06546 454 aa13.84□□□□□ -0.19
CDRT1-207ENST00000583965 PDE4BQ07343 736 aa13.84□□□□□ -0.19
CDRT1-207ENST00000583965 TSGA10IPQ3SY00 556 aa13.84□□□□□ -0.19
CDRT1-207ENST00000583965 DCAF15Q66K64 600 aa13.84□□□□□ -0.19
CDRT1-207ENST00000583965 MAP1SQ66K74 1059 aaPredicted RBP13.84□□□□□ -0.19
CDRT1-207ENST00000583965 C16orf86Q6ZW13 317 aa13.84□□□□□ -0.19
CDRT1-207ENST00000583965 USP48Q86UV5 1035 aa13.84□□□□□ -0.19
CDRT1-207ENST00000583965 CRACR2BQ8N4Y2 399 aaPredicted RBP13.84□□□□□ -0.19
CDRT1-207ENST00000583965 KCNB2Q92953 911 aa13.84□□□□□ -0.19
CDRT1-207ENST00000583965 TRIM34Q9BYJ4 488 aa13.84□□□□□ -0.19
CDRT1-207ENST00000583965 RNF41Q9H4P4 317 aaPredicted RBP13.84□□□□□ -0.19
CDRT1-207ENST00000583965 SCAF8Q9UPN6 1271 aaKnown RBP13.84□□□□□ -0.19
CDRT1-207ENST00000583965 CYP2D7A0A087X1C5 515 aa13.83□□□□□ -0.2
CDRT1-207ENST00000583965 ADM5C9JUS6 153 aa13.83□□□□□ -0.2
CDRT1-207ENST00000583965 NF2P35240 595 aa13.83□□□□□ -0.2
CDRT1-207ENST00000583965 ANAPC15P60006 121 aa13.83□□□□□ -0.2
CDRT1-207ENST00000583965 HAND2P61296 217 aa13.83□□□□□ -0.2
CDRT1-207ENST00000583965 CTDSPL2Q05D32 466 aa13.83□□□□□ -0.2
CDRT1-207ENST00000583965 KRT32Q14532 448 aa13.83□□□□□ -0.2
CDRT1-207ENST00000583965 AKNAD1Q5T1N1 836 aa13.83□□□□□ -0.2
CDRT1-207ENST00000583965 NBPF12Q5TAG4 269 aaPredicted RBP13.83□□□□□ -0.2
CDRT1-207ENST00000583965 STAG1Q8WVM7 1258 aa13.83□□□□□ -0.2
CDRT1-207ENST00000583965 CDCA5Q96FF9 252 aa13.83□□□□□ -0.2
CDRT1-207ENST00000583965 GLIS2Q9BZE0 524 aaPredicted RBP13.83□□□□□ -0.2
CDRT1-207ENST00000583965 CNNM2Q9H8M5 875 aa13.83□□□□□ -0.2
CDRT1-207ENST00000583965 TOMM70O94826 608 aa13.82□□□□□ -0.2
CDRT1-207ENST00000583965 FGRP09769 529 aa13.82□□□□□ -0.2
CDRT1-207ENST00000583965 SLC4A8Q2Y0W8 1093 aa13.82□□□□□ -0.2
CDRT1-207ENST00000583965 MFSD6Q6ZSS7 791 aa13.82□□□□□ -0.2
CDRT1-207ENST00000583965 SMC1BQ8NDV3 1235 aa13.82□□□□□ -0.2
CDRT1-207ENST00000583965 RBM46Q8TBY0 533 aaKnown RBP13.82□□□□□ -0.2
CDRT1-207ENST00000583965 C22orf23Q9BZE7 217 aa13.82□□□□□ -0.2
CDRT1-207ENST00000583965 NBPF3Q9H094 633 aa13.82□□□□□ -0.2
CDRT1-207ENST00000583965 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.82□□□□□ -0.2
CDRT1-207ENST00000583965 SSC5DA1L4H1 1573 aa13.82□□□□□ -0.2
CDRT1-207ENST00000583965 ORC4O43929 436 aa13.81□□□□□ -0.2
CDRT1-207ENST00000583965 CDK8P49336 464 aa13.81□□□□□ -0.2
CDRT1-207ENST00000583965 RBM25P49756 843 aaKnown RBP13.81□□□□□ -0.2
CDRT1-207ENST00000583965 TRDNQ13061 729 aa13.81□□□□□ -0.2
CDRT1-207ENST00000583965 TATDN1Q6P1N9 297 aa13.81□□□□□ -0.2
CDRT1-207ENST00000583965 TBC1D10CQ8IV04 446 aa13.81□□□□□ -0.2
CDRT1-207ENST00000583965 CDAN1Q8IWY9 1227 aa13.81□□□□□ -0.2
CDRT1-207ENST00000583965 IL17RAQ96F46 866 aa13.81□□□□□ -0.2
CDRT1-207ENST00000583965 DYNLL2Q96FJ2 89 aa13.81□□□□□ -0.2
CDRT1-207ENST00000583965 KRT23Q9C075 422 aa13.81□□□□□ -0.2
CDRT1-207ENST00000583965 MKNK2Q9HBH9 465 aa13.81□□□□□ -0.2
CDRT1-207ENST00000583965 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.81□□□□□ -0.2
CDRT1-207ENST00000583965 PHIPQ8WWQ0 1821 aa13.8□□□□□ -0.2
CDRT1-207ENST00000583965 E7EWF7 191 aa13.8□□□□□ -0.2
CDRT1-207ENST00000583965 PPP1R12BO60237 982 aaPredicted RBP13.8□□□□□ -0.2
CDRT1-207ENST00000583965 SHMT1P34896 483 aa13.8□□□□□ -0.2
CDRT1-207ENST00000583965 EVX2Q03828 476 aa13.8□□□□□ -0.2
CDRT1-207ENST00000583965 PRAMEF18Q5VWM3 479 aa13.8□□□□□ -0.2
CDRT1-207ENST00000583965 RASEFQ8IZ41 740 aa13.8□□□□□ -0.2
CDRT1-207ENST00000583965 CCDC17Q96LX7 622 aa13.8□□□□□ -0.2
CDRT1-207ENST00000583965 TBC1D32Q96NH3 1257 aa13.8□□□□□ -0.2
CDRT1-207ENST00000583965 ZNF341Q9BYN7 854 aa13.8□□□□□ -0.2
CDRT1-207ENST00000583965 DNAJC18Q9H819 358 aa13.8□□□□□ -0.2
CDRT1-207ENST00000583965 SNX14Q9Y5W7 946 aa13.8□□□□□ -0.2
CDRT1-207ENST00000583965 SMIM22K7EJ46 135 aa13.79□□□□□ -0.2
CDRT1-207ENST00000583965 ITGBL1O95965 494 aaPredicted RBP13.79□□□□□ -0.2
CDRT1-207ENST00000583965 HMGB1P09429 215 aaKnown RBP13.79□□□□□ -0.2
CDRT1-207ENST00000583965 RASA1P20936 1047 aa13.79□□□□□ -0.2
CDRT1-207ENST00000583965 PSMA5P28066 241 aa13.79□□□□□ -0.2
CDRT1-207ENST00000583965 FSTL1Q12841 308 aa13.79□□□□□ -0.2
CDRT1-207ENST00000583965 MIGA2Q7L4E1 593 aa13.79□□□□□ -0.2
CDRT1-207ENST00000583965 RALYLQ86SE5 291 aaKnown RBP13.79□□□□□ -0.2
CDRT1-207ENST00000583965 ZNF444Q8N0Y2 327 aaPredicted RBP13.79□□□□□ -0.2
CDRT1-207ENST00000583965 NCOA7Q8NI08 942 aa13.79□□□□□ -0.2
CDRT1-207ENST00000583965 ESR2Q92731 530 aa13.79□□□□□ -0.2
CDRT1-207ENST00000583965 GINM1Q9NU53 330 aa13.79□□□□□ -0.2
CDRT1-207ENST00000583965 ZNF112Q9UJU3 913 aa13.79□□□□□ -0.2
CDRT1-207ENST00000583965 PTPRFP10586 1907 aa13.78□□□□□ -0.2
CDRT1-207ENST00000583965 UNCXA6NJT0 531 aa13.78□□□□□ -0.2
CDRT1-207ENST00000583965 PHF20L1A8MW92 1017 aa13.78□□□□□ -0.2
CDRT1-207ENST00000583965 TRAF5O00463 557 aa13.78□□□□□ -0.2
CDRT1-207ENST00000583965 IREB2P48200 963 aaKnown RBP13.78□□□□□ -0.2
CDRT1-207ENST00000583965 FKBP1BP68106 108 aa13.78□□□□□ -0.2
CDRT1-207ENST00000583965 MAP3K11Q16584 847 aa13.78□□□□□ -0.2
CDRT1-207ENST00000583965 CERKLQ49MI3 558 aaPredicted RBP13.78□□□□□ -0.2
CDRT1-207ENST00000583965 STOX1Q6ZVD7 989 aa13.78□□□□□ -0.2
CDRT1-207ENST00000583965 STK11IPQ8N1F8 1099 aa13.78□□□□□ -0.2
CDRT1-207ENST00000583965 SLC44A5Q8NCS7 719 aa13.78□□□□□ -0.2
CDRT1-207ENST00000583965 TM6SF1Q9BZW5 370 aa13.78□□□□□ -0.2
CDRT1-207ENST00000583965 TOMM22Q9NS69 142 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms