RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 FOXP4Q8IVH2 680 aaPredicted RBP10.89□□□□□ -0.67
CASC3-209ENST00000583902 RASEFQ8IZ41 740 aa10.89□□□□□ -0.67
CASC3-209ENST00000583902 TGFBRAP1Q8WUH2 860 aa10.89□□□□□ -0.67
CASC3-209ENST00000583902 SDR42E1Q8WUS8 393 aa10.89□□□□□ -0.67
CASC3-209ENST00000583902 ESR2Q92731 530 aa10.89□□□□□ -0.67
CASC3-209ENST00000583902 TMEM87BQ96K49 555 aa10.89□□□□□ -0.67
CASC3-209ENST00000583902 ZSCAN31Q96LW9 406 aaPredicted RBP10.89□□□□□ -0.67
CASC3-209ENST00000583902 EPB41L4AQ9HCS5 686 aaPredicted RBP10.89□□□□□ -0.67
CASC3-209ENST00000583902 GPRC5DQ9NZD1 345 aa10.89□□□□□ -0.67
CASC3-209ENST00000583902 PI4KBQ9UBF8 816 aa10.89□□□□□ -0.67
CASC3-209ENST00000583902 PPP2R3BQ9Y5P8 575 aa10.89□□□□□ -0.67
CASC3-209ENST00000583902 DDX60LQ5H9U9 1706 aaKnown RBP10.89□□□□□ -0.67
CASC3-209ENST00000583902 PITPNM2Q9BZ72 1349 aa10.88□□□□□ -0.67
CASC3-209ENST00000583902 PRKAB2O43741 272 aa10.88□□□□□ -0.67
CASC3-209ENST00000583902 CASTP20810 708 aaKnown RBP10.88□□□□□ -0.67
CASC3-209ENST00000583902 RPS6KB1P23443 525 aa10.88□□□□□ -0.67
CASC3-209ENST00000583902 GMPSP49915 693 aaPredicted RBP10.88□□□□□ -0.67
CASC3-209ENST00000583902 PRELPP51888 382 aa10.88□□□□□ -0.67
CASC3-209ENST00000583902 NEK4P51957 841 aa10.88□□□□□ -0.67
CASC3-209ENST00000583902 RCAN1P53805 252 aa10.88□□□□□ -0.67
CASC3-209ENST00000583902 IQCA1Q86XH1 822 aa10.88□□□□□ -0.67
CASC3-209ENST00000583902 APOBEC3FQ8IUX4 373 aaKnown RBP10.88□□□□□ -0.67
CASC3-209ENST00000583902 MICALL2Q8IY33 904 aa10.88□□□□□ -0.67
CASC3-209ENST00000583902 ZC3H15Q8WU90 426 aaKnown RBP10.88□□□□□ -0.67
CASC3-209ENST00000583902 JAKMIP1Q96N16 626 aaKnown RBP10.88□□□□□ -0.67
CASC3-209ENST00000583902 MXD3Q9BW11 206 aa10.88□□□□□ -0.67
CASC3-209ENST00000583902 OSBPL5Q9H0X9 879 aaPredicted RBP10.88□□□□□ -0.67
CASC3-209ENST00000583902 SH2B1Q9NRF2 756 aaPredicted RBP10.88□□□□□ -0.67
CASC3-209ENST00000583902 GINM1Q9NU53 330 aa10.88□□□□□ -0.67
CASC3-209ENST00000583902 HERC5Q9UII4 1024 aaKnown RBP10.88□□□□□ -0.67
CASC3-209ENST00000583902 MYH8P13535 1937 aa10.88□□□□□ -0.67
CASC3-209ENST00000583902 ERICH2A1L162 156 aa10.87□□□□□ -0.67
CASC3-209ENST00000583902 GLTPD2A6NH11 291 aa10.87□□□□□ -0.67
CASC3-209ENST00000583902 MINDY4BA8MYZ0 360 aa10.87□□□□□ -0.67
CASC3-209ENST00000583902 WNT10BO00744 389 aa10.87□□□□□ -0.67
CASC3-209ENST00000583902 TBC1D12O60347 775 aa10.87□□□□□ -0.67
CASC3-209ENST00000583902 PPP2R5BQ15173 497 aa10.87□□□□□ -0.67
CASC3-209ENST00000583902 C16orf86Q6ZW13 317 aa10.87□□□□□ -0.67
CASC3-209ENST00000583902 METTL16Q86W50 562 aaKnown RBP10.87□□□□□ -0.67
CASC3-209ENST00000583902 FAM151AQ8WW52 585 aa10.87□□□□□ -0.67
CASC3-209ENST00000583902 PRMT6Q96LA8 375 aaPredicted RBP10.87□□□□□ -0.67
CASC3-209ENST00000583902 CCDC17Q96LX7 622 aa10.87□□□□□ -0.67
CASC3-209ENST00000583902 IPO9Q96P70 1041 aaKnown RBP10.87□□□□□ -0.67
CASC3-209ENST00000583902 AGXT2Q9BYV1 514 aa10.87□□□□□ -0.67
CASC3-209ENST00000583902 ADARB2Q9NS39 739 aaKnown RBP10.87□□□□□ -0.67
CASC3-209ENST00000583902 PDRG1Q9NUG6 133 aa10.87□□□□□ -0.67
CASC3-209ENST00000583902 TCP11L1Q9NUJ3 509 aa10.87□□□□□ -0.67
CASC3-209ENST00000583902 ZNF70Q9UC06 446 aaPredicted RBP10.87□□□□□ -0.67
CASC3-209ENST00000583902 SERPINB13Q9UIV8 391 aa10.87□□□□□ -0.67
CASC3-209ENST00000583902 PALD1Q9ULE6 856 aa10.87□□□□□ -0.67
CASC3-209ENST00000583902 GJA3Q9Y6H8 435 aa10.87□□□□□ -0.67
CASC3-209ENST00000583902 ZNF541Q9H0D2 1346 aa10.86□□□□□ -0.67
CASC3-209ENST00000583902 LIFRP42702 1097 aa10.86□□□□□ -0.67
CASC3-209ENST00000583902 EVCP57679 992 aa10.86□□□□□ -0.67
CASC3-209ENST00000583902 EXOSC10Q01780 885 aaKnown RBP10.86□□□□□ -0.67
CASC3-209ENST00000583902 KIF4BQ2VIQ3 1234 aa10.86□□□□□ -0.67
CASC3-209ENST00000583902 USP50Q70EL3 339 aaPredicted RBP10.86□□□□□ -0.67
CASC3-209ENST00000583902 PNMA8AQ86V59 439 aaPredicted RBP10.86□□□□□ -0.67
CASC3-209ENST00000583902 MAPKAPK5Q8IW41 473 aa10.86□□□□□ -0.67
CASC3-209ENST00000583902 MB21D2Q8IYB1 491 aaPredicted RBP10.86□□□□□ -0.67
CASC3-209ENST00000583902 TTC14Q96N46 770 aa10.86□□□□□ -0.67
CASC3-209ENST00000583902 LIMCH1Q9UPQ0 1083 aa10.86□□□□□ -0.67
CASC3-209ENST00000583902 WDR90Q96KV7 1748 aa10.85□□□□□ -0.67
CASC3-209ENST00000583902 K7ELQ4 463 aaPredicted RBP10.85□□□□□ -0.67
CASC3-209ENST00000583902 FGD1P98174 961 aa10.85□□□□□ -0.67
CASC3-209ENST00000583902 GABPAQ06546 454 aa10.85□□□□□ -0.67
CASC3-209ENST00000583902 ZNF444Q8N0Y2 327 aaPredicted RBP10.85□□□□□ -0.67
CASC3-209ENST00000583902 TRIM34Q9BYJ4 488 aa10.85□□□□□ -0.67
CASC3-209ENST00000583902 TDRD3Q9H7E2 651 aaKnown RBP10.85□□□□□ -0.67
CASC3-209ENST00000583902 MKNK2Q9HBH9 465 aa10.85□□□□□ -0.67
CASC3-209ENST00000583902 HACL1Q9UJ83 578 aa10.85□□□□□ -0.67
CASC3-209ENST00000583902 SYNPO2Q9UMS6 1093 aa10.85□□□□□ -0.67
CASC3-209ENST00000583902 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.85□□□□□ -0.67
CASC3-209ENST00000583902 DHX16O60231 1041 aaKnown RBP10.84□□□□□ -0.67
CASC3-209ENST00000583902 HAND2P61296 217 aa10.84□□□□□ -0.67
CASC3-209ENST00000583902 MAP3K10Q02779 954 aa10.84□□□□□ -0.67
CASC3-209ENST00000583902 ADCK5Q3MIX3 580 aa10.84□□□□□ -0.67
CASC3-209ENST00000583902 STOX1Q6ZVD7 989 aa10.84□□□□□ -0.67
CASC3-209ENST00000583902 SGMS1Q86VZ5 419 aa10.84□□□□□ -0.67
CASC3-209ENST00000583902 DGKHQ86XP1 1220 aa10.84□□□□□ -0.67
CASC3-209ENST00000583902 TBC1D10CQ8IV04 446 aa10.84□□□□□ -0.67
CASC3-209ENST00000583902 ANKS1AQ92625 1134 aa10.84□□□□□ -0.67
CASC3-209ENST00000583902 ZNF274Q96GC6 653 aaPredicted RBP10.84□□□□□ -0.67
CASC3-209ENST00000583902 INTS4Q96HW7 963 aaKnown RBP10.84□□□□□ -0.67
CASC3-209ENST00000583902 UBAC1Q9BSL1 405 aa10.84□□□□□ -0.67
CASC3-209ENST00000583902 NBPF3Q9H094 633 aa10.84□□□□□ -0.67
CASC3-209ENST00000583902 FAM198AQ9UFP1 575 aa10.84□□□□□ -0.67
CASC3-209ENST00000583902 ANGEL1Q9UNK9 670 aaKnown RBP10.84□□□□□ -0.67
CASC3-209ENST00000583902 PLIN4Q96Q06 1357 aa10.84□□□□□ -0.67
CASC3-209ENST00000583902 CALM1P0DP23 149 aa10.83□□□□□ -0.68
CASC3-209ENST00000583902 CALM2P0DP24 149 aa10.83□□□□□ -0.68
CASC3-209ENST00000583902 CALM3P0DP25 149 aa10.83□□□□□ -0.68
CASC3-209ENST00000583902 CDK8P49336 464 aa10.83□□□□□ -0.68
CASC3-209ENST00000583902 PICALMQ13492 652 aa10.83□□□□□ -0.68
CASC3-209ENST00000583902 SUPT20HL1Q3ZLR7 823 aa10.83□□□□□ -0.68
CASC3-209ENST00000583902 DCAF15Q66K64 600 aa10.83□□□□□ -0.68
CASC3-209ENST00000583902 SYNE3Q6ZMZ3 975 aa10.83□□□□□ -0.68
CASC3-209ENST00000583902 ZSCAN29Q8IWY8 852 aaPredicted RBP10.83□□□□□ -0.68
CASC3-209ENST00000583902 CRACR2BQ8N4Y2 399 aaPredicted RBP10.83□□□□□ -0.68
CASC3-209ENST00000583902 RGS22Q8NE09 1264 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms