RNA–Protein interactions for RNA: ENST00000583382.1

CDH8-209, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 1,528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-209ENST00000583382 FXR1P51114 621 aaKnown RBP eCLIP6.34□□□□□ -1.39
CDH8-209ENST00000583382 KRT76Q01546 638 aa6.34□□□□□ -1.39
CDH8-209ENST00000583382 RRS1Q15050 365 aaKnown RBP6.34□□□□□ -1.39
CDH8-209ENST00000583382 C16orf46Q6P387 395 aa6.34□□□□□ -1.39
CDH8-209ENST00000583382 FIGNL1Q6PIW4 674 aa6.34□□□□□ -1.39
CDH8-209ENST00000583382 ABHD17AQ96GS6 310 aa6.34□□□□□ -1.39
CDH8-209ENST00000583382 COL25A1Q9BXS0 654 aaPredicted RBP6.34□□□□□ -1.39
CDH8-209ENST00000583382 ANKIB1Q9P2G1 1089 aa6.34□□□□□ -1.39
CDH8-209ENST00000583382 HCN2Q9UL51 889 aa6.34□□□□□ -1.39
CDH8-209ENST00000583382 PCDHGC4Q9Y5F7 938 aa6.34□□□□□ -1.39
CDH8-209ENST00000583382 TONSLQ96HA7 1378 aa6.33□□□□□ -1.4
CDH8-209ENST00000583382 ANKRD31Q8N7Z5 1873 aa6.33□□□□□ -1.4
CDH8-209ENST00000583382 DCDC2BA2VCK2 349 aa6.33□□□□□ -1.4
CDH8-209ENST00000583382 NFIXQ14938 502 aa6.33□□□□□ -1.4
CDH8-209ENST00000583382 SAMD5Q5TGI4 173 aa6.33□□□□□ -1.4
CDH8-209ENST00000583382 USPL1Q5W0Q7 1092 aa6.33□□□□□ -1.4
CDH8-209ENST00000583382 CST9Q5W186 159 aa6.33□□□□□ -1.4
CDH8-209ENST00000583382 CIAPIN1Q6FI81 312 aa6.33□□□□□ -1.4
CDH8-209ENST00000583382 TRERF1Q96PN7 1200 aa6.33□□□□□ -1.4
CDH8-209ENST00000583382 NCAPD2Q15021 1401 aa6.33□□□□□ -1.4
CDH8-209ENST00000583382 TJP1Q07157 1748 aa6.33□□□□□ -1.4
CDH8-209ENST00000583382 SLX4Q8IY92 1834 aa6.33□□□□□ -1.4
CDH8-209ENST00000583382 RNF123Q5XPI4 1314 aa6.32□□□□□ -1.4
CDH8-209ENST00000583382 WASHC2AQ641Q2 1341 aa6.32□□□□□ -1.4
CDH8-209ENST00000583382 COL11A2P13942 1736 aaPredicted RBP6.32□□□□□ -1.4
CDH8-209ENST00000583382 TRAF5O00463 557 aa6.32□□□□□ -1.4
CDH8-209ENST00000583382 TNFRSF10BO14763 440 aa6.32□□□□□ -1.4
CDH8-209ENST00000583382 KHNYNO15037 678 aaKnown RBP6.32□□□□□ -1.4
CDH8-209ENST00000583382 CABP4P57796 275 aa6.32□□□□□ -1.4
CDH8-209ENST00000583382 TNP2Q05952 138 aa6.32□□□□□ -1.4
CDH8-209ENST00000583382 NOGQ13253 232 aa6.32□□□□□ -1.4
CDH8-209ENST00000583382 PKN2Q16513 984 aaKnown RBP6.32□□□□□ -1.4
CDH8-209ENST00000583382 C11orf91Q3C1V1 193 aa6.32□□□□□ -1.4
CDH8-209ENST00000583382 HSP90AB2PQ58FF8 381 aa6.32□□□□□ -1.4
CDH8-209ENST00000583382 B4GALNT3Q6L9W6 998 aa6.32□□□□□ -1.4
CDH8-209ENST00000583382 GPC2Q8N158 579 aa6.32□□□□□ -1.4
CDH8-209ENST00000583382 SLC17A8Q8NDX2 589 aa6.32□□□□□ -1.4
CDH8-209ENST00000583382 BRIP1Q9BX63 1249 aa6.32□□□□□ -1.4
CDH8-209ENST00000583382 CFHR5Q9BXR6 569 aa6.32□□□□□ -1.4
CDH8-209ENST00000583382 SAGE1Q9NXZ1 904 aa6.32□□□□□ -1.4
CDH8-209ENST00000583382 NARFQ9UHQ1 456 aa6.32□□□□□ -1.4
CDH8-209ENST00000583382 ATXN7L1Q9ULK2 861 aaPredicted RBP6.32□□□□□ -1.4
CDH8-209ENST00000583382 KIF20BQ96Q89 1820 aa6.32□□□□□ -1.4
CDH8-209ENST00000583382 ZNF541Q9H0D2 1346 aa6.32□□□□□ -1.4
CDH8-209ENST00000583382 TGFBR3LH3BV60 316 aa6.31□□□□□ -1.4
CDH8-209ENST00000583382 EFSO43281 561 aa6.31□□□□□ -1.4
CDH8-209ENST00000583382 FAM157BP0CG42 384 aa6.31□□□□□ -1.4
CDH8-209ENST00000583382 MAPTP10636 758 aaKnown RBP6.31□□□□□ -1.4
CDH8-209ENST00000583382 HIF1AQ16665 826 aa6.31□□□□□ -1.4
CDH8-209ENST00000583382 CCDC93Q567U6 631 aa6.31□□□□□ -1.4
CDH8-209ENST00000583382 AKAP4Q5JQC9 854 aa6.31□□□□□ -1.4
CDH8-209ENST00000583382 FAM26DQ5JW98 314 aa6.31□□□□□ -1.4
CDH8-209ENST00000583382 STYK1Q6J9G0 422 aa6.31□□□□□ -1.4
CDH8-209ENST00000583382 BTLAQ7Z6A9 289 aa6.31□□□□□ -1.4
CDH8-209ENST00000583382 NPM2Q86SE8 214 aaKnown RBP6.31□□□□□ -1.4
CDH8-209ENST00000583382 DMGDHQ9UI17 866 aaKnown RBP6.31□□□□□ -1.4
CDH8-209ENST00000583382 NPHP1O15259 732 aa6.3□□□□□ -1.4
CDH8-209ENST00000583382 CTBSQ01459 385 aa6.3□□□□□ -1.4
CDH8-209ENST00000583382 FKBP4Q02790 459 aaKnown RBP eCLIP6.3□□□□□ -1.4
CDH8-209ENST00000583382 TYRO3Q06418 890 aa6.3□□□□□ -1.4
CDH8-209ENST00000583382 IER5Q5VY09 327 aa6.3□□□□□ -1.4
CDH8-209ENST00000583382 USP50Q70EL3 339 aaPredicted RBP6.3□□□□□ -1.4
CDH8-209ENST00000583382 CTU1Q7Z7A3 348 aaKnown RBP6.3□□□□□ -1.4
CDH8-209ENST00000583382 SAPCD2Q86UD0 394 aa6.3□□□□□ -1.4
CDH8-209ENST00000583382 GTF3C2Q8WUA4 911 aaPredicted RBP6.3□□□□□ -1.4
CDH8-209ENST00000583382 JDP2Q8WYK2 163 aa6.3□□□□□ -1.4
CDH8-209ENST00000583382 IFT43Q96FT9 208 aa6.3□□□□□ -1.4
CDH8-209ENST00000583382 CEP63Q96MT8 703 aa6.3□□□□□ -1.4
CDH8-209ENST00000583382 CNTNAP3BQ96NU0 1288 aa6.3□□□□□ -1.4
CDH8-209ENST00000583382 TRAIPQ9BWF2 469 aa6.3□□□□□ -1.4
CDH8-209ENST00000583382 CNTNAP3Q9BZ76 1288 aa6.3□□□□□ -1.4
CDH8-209ENST00000583382 PHF24Q9UPV7 400 aa6.3□□□□□ -1.4
CDH8-209ENST00000583382 COL15A1P39059 1388 aa6.3□□□□□ -1.4
CDH8-209ENST00000583382 BCORQ6W2J9 1755 aa6.3□□□□□ -1.4
CDH8-209ENST00000583382 SOS1Q07889 1333 aaPredicted RBP6.3□□□□□ -1.4
CDH8-209ENST00000583382 FGFR3P22607 806 aa6.3□□□□□ -1.4
CDH8-209ENST00000583382 EIF6P56537 245 aaKnown RBP6.3□□□□□ -1.4
CDH8-209ENST00000583382 SFSWAPQ12872 951 aaKnown RBP6.3□□□□□ -1.4
CDH8-209ENST00000583382 PRPF40BQ6NWY9 871 aaKnown RBP6.3□□□□□ -1.4
CDH8-209ENST00000583382 ETFBKMTQ8IXQ9 262 aa6.3□□□□□ -1.4
CDH8-209ENST00000583382 RTKN2Q8IZC4 609 aa6.3□□□□□ -1.4
CDH8-209ENST00000583382 MASTLQ96GX5 879 aa6.3□□□□□ -1.4
CDH8-209ENST00000583382 DNMT3AQ9Y6K1 912 aaPredicted RBP6.3□□□□□ -1.4
CDH8-209ENST00000583382 CARMIL3Q8ND23 1372 aa6.3□□□□□ -1.4
CDH8-209ENST00000583382 A0A087WZG4 1122 aa6.29□□□□□ -1.4
CDH8-209ENST00000583382 FZD9O00144 591 aa6.29□□□□□ -1.4
CDH8-209ENST00000583382 C2CD2LO14523 706 aa6.29□□□□□ -1.4
CDH8-209ENST00000583382 MICAL2O94851 1124 aa6.29□□□□□ -1.4
CDH8-209ENST00000583382 CELF2O95319 508 aaKnown RBP6.29□□□□□ -1.4
CDH8-209ENST00000583382 BRD1O95696 1058 aa6.29□□□□□ -1.4
CDH8-209ENST00000583382 CD33P20138 364 aa6.29□□□□□ -1.4
CDH8-209ENST00000583382 MX2P20592 715 aa6.29□□□□□ -1.4
CDH8-209ENST00000583382 BRD2P25440 801 aaKnown RBP6.29□□□□□ -1.4
CDH8-209ENST00000583382 ST5P78524 1137 aa6.29□□□□□ -1.4
CDH8-209ENST00000583382 MTMR3Q13615 1198 aa6.29□□□□□ -1.4
CDH8-209ENST00000583382 GRIN2CQ14957 1233 aa6.29□□□□□ -1.4
CDH8-209ENST00000583382 INTS5Q6P9B9 1019 aaKnown RBP6.29□□□□□ -1.4
CDH8-209ENST00000583382 TREML1Q86YW5 311 aa6.29□□□□□ -1.4
CDH8-209ENST00000583382 HELQQ8TDG4 1101 aa6.29□□□□□ -1.4
CDH8-209ENST00000583382 BRD7Q9NPI1 651 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms