RNA–Protein interactions for RNA: ENST00000582818.5

ERBB2-213, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-213ENST00000582818 GORABQ5T7V8 394 aa17.2■□□□□ 0.34
ERBB2-213ENST00000582818 CEP85Q6P2H3 762 aa17.2■□□□□ 0.34
ERBB2-213ENST00000582818 NSUN4Q96CB9 384 aaKnown RBP17.2■□□□□ 0.34
ERBB2-213ENST00000582818 GPR108Q9NPR9 543 aa17.2■□□□□ 0.34
ERBB2-213ENST00000582818 DDX4Q9NQI0 724 aaKnown RBP17.2■□□□□ 0.34
ERBB2-213ENST00000582818 HMG20BQ9P0W2 317 aa17.2■□□□□ 0.34
ERBB2-213ENST00000582818 AGTPBP1Q9UPW5 1226 aa17.2■□□□□ 0.34
ERBB2-213ENST00000582818 SUPT16HQ9Y5B9 1047 aaKnown RBP17.2■□□□□ 0.34
ERBB2-213ENST00000582818 RANBP2P49792 3224 aaKnown RBP17.2■□□□□ 0.34
ERBB2-213ENST00000582818 PNMA6EA0A0J9YXQ4 647 aa17.19■□□□□ 0.34
ERBB2-213ENST00000582818 MTFR1Q15390 333 aa17.19■□□□□ 0.34
ERBB2-213ENST00000582818 UBE2Q1Q7Z7E8 422 aa17.19■□□□□ 0.34
ERBB2-213ENST00000582818 NEUROD6Q96NK8 337 aa17.19■□□□□ 0.34
ERBB2-213ENST00000582818 HTATIP2Q9BUP3 242 aa17.19■□□□□ 0.34
ERBB2-213ENST00000582818 HERC5Q9UII4 1024 aaKnown RBP17.19■□□□□ 0.34
ERBB2-213ENST00000582818 NOP58Q9Y2X3 529 aaKnown RBP17.19■□□□□ 0.34
ERBB2-213ENST00000582818 ATAD5Q96QE3 1844 aa17.19■□□□□ 0.34
ERBB2-213ENST00000582818 LOC285556D6RIA3 1793 aa17.18■□□□□ 0.34
ERBB2-213ENST00000582818 CCL5P13501 91 aa17.18■□□□□ 0.34
ERBB2-213ENST00000582818 PLCG2P16885 1265 aa17.18■□□□□ 0.34
ERBB2-213ENST00000582818 PRKCZQ05513 592 aa17.18■□□□□ 0.34
ERBB2-213ENST00000582818 PABPC4Q13310 644 aaKnown RBP eCLIP17.18■□□□□ 0.34
ERBB2-213ENST00000582818 GADL1Q6ZQY3 521 aa17.18■□□□□ 0.34
ERBB2-213ENST00000582818 SMCR8Q8TEV9 937 aaPredicted RBP17.18■□□□□ 0.34
ERBB2-213ENST00000582818 ZNF384Q8TF68 577 aa17.18■□□□□ 0.34
ERBB2-213ENST00000582818 SHISA4Q96DD7 197 aa17.18■□□□□ 0.34
ERBB2-213ENST00000582818 RNF208Q9H0X6 261 aa17.18■□□□□ 0.34
ERBB2-213ENST00000582818 DHX36Q9H2U1 1008 aaKnown RBP17.18■□□□□ 0.34
ERBB2-213ENST00000582818 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.18■□□□□ 0.34
ERBB2-213ENST00000582818 BIN2Q9UBW5 565 aaPredicted RBP17.18■□□□□ 0.34
ERBB2-213ENST00000582818 SURF6O75683 361 aaKnown RBP17.17■□□□□ 0.34
ERBB2-213ENST00000582818 GCLCP48506 637 aaPredicted RBP17.17■□□□□ 0.34
ERBB2-213ENST00000582818 FXR1P51114 621 aaKnown RBP eCLIP17.17■□□□□ 0.34
ERBB2-213ENST00000582818 PICALMQ13492 652 aa17.17■□□□□ 0.34
ERBB2-213ENST00000582818 FAM110CQ1W6H9 321 aa17.17■□□□□ 0.34
ERBB2-213ENST00000582818 C1orf115Q9H7X2 142 aa17.17■□□□□ 0.34
ERBB2-213ENST00000582818 GINM1Q9NU53 330 aa17.17■□□□□ 0.34
ERBB2-213ENST00000582818 TRIM75PA6NK02 468 aa17.16■□□□□ 0.34
ERBB2-213ENST00000582818 TNPO2O14787 897 aaKnown RBP17.16■□□□□ 0.34
ERBB2-213ENST00000582818 ADCY3O60266 1144 aa17.16■□□□□ 0.34
ERBB2-213ENST00000582818 MYCP01106 439 aaPredicted RBP17.16■□□□□ 0.34
ERBB2-213ENST00000582818 ERC1Q8IUD2 1116 aa17.16■□□□□ 0.34
ERBB2-213ENST00000582818 ZNF280CQ8ND82 737 aa17.16■□□□□ 0.34
ERBB2-213ENST00000582818 COA7Q96BR5 231 aa17.16■□□□□ 0.34
ERBB2-213ENST00000582818 ZNF512BQ96KM6 892 aaPredicted RBP17.16■□□□□ 0.34
ERBB2-213ENST00000582818 NOL10Q9BSC4 688 aaKnown RBP17.16■□□□□ 0.34
ERBB2-213ENST00000582818 PI4KBQ9UBF8 816 aa17.16■□□□□ 0.34
ERBB2-213ENST00000582818 COLQQ9Y215 455 aaPredicted RBP17.16■□□□□ 0.34
ERBB2-213ENST00000582818 FOCADQ5VW36 1801 aa17.15■□□□□ 0.34
ERBB2-213ENST00000582818 H0YGN5 161 aa17.15■□□□□ 0.34
ERBB2-213ENST00000582818 SGPL1O95470 568 aa17.15■□□□□ 0.34
ERBB2-213ENST00000582818 BAG3O95817 575 aa17.15■□□□□ 0.34
ERBB2-213ENST00000582818 CAP2P40123 477 aa17.15■□□□□ 0.34
ERBB2-213ENST00000582818 FLT3LGP49771 235 aa17.15■□□□□ 0.34
ERBB2-213ENST00000582818 PPP4CP60510 307 aa17.15■□□□□ 0.34
ERBB2-213ENST00000582818 SH3D19Q5HYK7 790 aa17.15■□□□□ 0.34
ERBB2-213ENST00000582818 TMED8Q6PL24 325 aaPredicted RBP17.15■□□□□ 0.34
ERBB2-213ENST00000582818 AS3MTQ9HBK9 375 aa17.15■□□□□ 0.34
ERBB2-213ENST00000582818 RAI14Q9P0K7 980 aa17.15■□□□□ 0.34
ERBB2-213ENST00000582818 LRP2BPQ9P2M1 347 aa17.15■□□□□ 0.34
ERBB2-213ENST00000582818 NR2E3Q9Y5X4 410 aa17.15■□□□□ 0.34
ERBB2-213ENST00000582818 MAST2Q6P0Q8 1798 aa17.15■□□□□ 0.34
ERBB2-213ENST00000582818 USP17L5A8MUK1 530 aa17.14■□□□□ 0.33
ERBB2-213ENST00000582818 MCAMP43121 646 aa17.14■□□□□ 0.33
ERBB2-213ENST00000582818 OS9Q13438 667 aaPredicted RBP17.14■□□□□ 0.33
ERBB2-213ENST00000582818 METTL16Q86W50 562 aaKnown RBP17.14■□□□□ 0.33
ERBB2-213ENST00000582818 CERS3Q8IU89 383 aa17.14■□□□□ 0.33
ERBB2-213ENST00000582818 TEX11Q8IYF3 940 aa17.14■□□□□ 0.33
ERBB2-213ENST00000582818 U2AF1L4Q8WU68 220 aaKnown RBP17.14■□□□□ 0.33
ERBB2-213ENST00000582818 GABRQQ9UN88 632 aa17.14■□□□□ 0.33
ERBB2-213ENST00000582818 CDK5RAP2Q96SN8 1893 aa17.14■□□□□ 0.33
ERBB2-213ENST00000582818 RAB11FIP3O75154 756 aa17.13■□□□□ 0.33
ERBB2-213ENST00000582818 ASNSP08243 561 aa17.13■□□□□ 0.33
ERBB2-213ENST00000582818 SPP2Q13103 211 aa17.13■□□□□ 0.33
ERBB2-213ENST00000582818 CCDC158Q5M9N0 1113 aa17.13■□□□□ 0.33
ERBB2-213ENST00000582818 FOXP4Q8IVH2 680 aaPredicted RBP17.13■□□□□ 0.33
ERBB2-213ENST00000582818 DPF3Q92784 378 aa17.13■□□□□ 0.33
ERBB2-213ENST00000582818 WDR18Q9BV38 432 aa17.13■□□□□ 0.33
ERBB2-213ENST00000582818 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.13■□□□□ 0.33
ERBB2-213ENST00000582818 CENPBP07199 599 aaPredicted RBP17.12■□□□□ 0.33
ERBB2-213ENST00000582818 PI16Q6UXB8 463 aa17.12■□□□□ 0.33
ERBB2-213ENST00000582818 TBC1D9Q6ZT07 1266 aa17.12■□□□□ 0.33
ERBB2-213ENST00000582818 ANKRD13CQ8N6S4 541 aa17.12■□□□□ 0.33
ERBB2-213ENST00000582818 CRBNQ96SW2 442 aa17.12■□□□□ 0.33
ERBB2-213ENST00000582818 UNC93B1Q9H1C4 597 aa17.12■□□□□ 0.33
ERBB2-213ENST00000582818 PAK6Q9NQU5 681 aaPredicted RBP17.12■□□□□ 0.33
ERBB2-213ENST00000582818 C19orf81C9J6K1 198 aa17.11■□□□□ 0.33
ERBB2-213ENST00000582818 FARP2O94887 1054 aaPredicted RBP17.11■□□□□ 0.33
ERBB2-213ENST00000582818 INHAP05111 366 aa17.11■□□□□ 0.33
ERBB2-213ENST00000582818 HOXA7P31268 230 aaPredicted RBP17.11■□□□□ 0.33
ERBB2-213ENST00000582818 TNNI3KQ59H18 835 aa17.11■□□□□ 0.33
ERBB2-213ENST00000582818 TREML2Q5T2D2 321 aa17.11■□□□□ 0.33
ERBB2-213ENST00000582818 NAA16Q6N069 864 aaPredicted RBP17.11■□□□□ 0.33
ERBB2-213ENST00000582818 SIRT2Q8IXJ6 389 aa17.11■□□□□ 0.33
ERBB2-213ENST00000582818 CRISPLD2Q9H0B8 497 aa17.11■□□□□ 0.33
ERBB2-213ENST00000582818 FPGT-TNNI3KV9GXZ4 949 aa17.11■□□□□ 0.33
ERBB2-213ENST00000582818 A0A1W2PPC1 479 aa17.1■□□□□ 0.33
ERBB2-213ENST00000582818 ECM2O94769 699 aaPredicted RBP17.1■□□□□ 0.33
ERBB2-213ENST00000582818 TTC39AQ5SRH9 613 aa17.1■□□□□ 0.33
ERBB2-213ENST00000582818 ANKLE1Q8NAG6 615 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms