RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 NTSR2O95665 410 aa12.93□□□□□ -0.34
SS18-221ENST00000582448 POU4F2Q12837 409 aa12.93□□□□□ -0.34
SS18-221ENST00000582448 MAP7D1Q3KQU3 841 aa12.93□□□□□ -0.34
SS18-221ENST00000582448 CIAPIN1Q6FI81 312 aa12.93□□□□□ -0.34
SS18-221ENST00000582448 DPP8Q6V1X1 898 aaPredicted RBP12.93□□□□□ -0.34
SS18-221ENST00000582448 SAPCD2Q86UD0 394 aa12.93□□□□□ -0.34
SS18-221ENST00000582448 ZNF34Q8IZ26 560 aa12.93□□□□□ -0.34
SS18-221ENST00000582448 SUPT20HQ8NEM7 779 aa12.93□□□□□ -0.34
SS18-221ENST00000582448 ZNF428Q96B54 188 aa12.93□□□□□ -0.34
SS18-221ENST00000582448 XAGE2Q96GT9 111 aa12.93□□□□□ -0.34
SS18-221ENST00000582448 ESYT1Q9BSJ8 1104 aa12.93□□□□□ -0.34
SS18-221ENST00000582448 UTP14AQ9BVJ6 771 aaKnown RBP12.93□□□□□ -0.34
SS18-221ENST00000582448 MCOLN1Q9GZU1 580 aa12.93□□□□□ -0.34
SS18-221ENST00000582448 ATP6V0A2Q9Y487 856 aa12.93□□□□□ -0.34
SS18-221ENST00000582448 SNED1Q8TER0 1413 aa12.93□□□□□ -0.34
SS18-221ENST00000582448 LTBP1Q14766 1721 aa12.93□□□□□ -0.34
SS18-221ENST00000582448 ITGA6P23229 1130 aa12.92□□□□□ -0.34
SS18-221ENST00000582448 DGKZQ13574 1117 aa12.92□□□□□ -0.34
SS18-221ENST00000582448 TSR2Q969E8 191 aaKnown RBP12.92□□□□□ -0.34
SS18-221ENST00000582448 ANXA1P04083 346 aa12.91□□□□□ -0.34
SS18-221ENST00000582448 HCLS1P14317 486 aaPredicted RBP12.91□□□□□ -0.34
SS18-221ENST00000582448 LORP23490 312 aaPredicted RBP12.91□□□□□ -0.34
SS18-221ENST00000582448 RGS19P49795 217 aa12.91□□□□□ -0.34
SS18-221ENST00000582448 HIRAP54198 1017 aaPredicted RBP12.91□□□□□ -0.34
SS18-221ENST00000582448 CENPCQ03188 943 aa12.91□□□□□ -0.34
SS18-221ENST00000582448 EXOSC9Q06265 439 aaKnown RBP12.91□□□□□ -0.34
SS18-221ENST00000582448 AIMP1Q12904 312 aaKnown RBP12.91□□□□□ -0.34
SS18-221ENST00000582448 PARP10Q53GL7 1025 aa12.91□□□□□ -0.34
SS18-221ENST00000582448 USP48Q86UV5 1035 aa12.91□□□□□ -0.34
SS18-221ENST00000582448 CCDC136Q96JN2 1154 aa12.91□□□□□ -0.34
SS18-221ENST00000582448 ETNK1Q9HBU6 452 aa12.91□□□□□ -0.34
SS18-221ENST00000582448 CUEDC1Q9NWM3 386 aaPredicted RBP12.91□□□□□ -0.34
SS18-221ENST00000582448 ABCC4O15439 1325 aa12.9□□□□□ -0.34
SS18-221ENST00000582448 SHTN1A0MZ66 631 aa12.9□□□□□ -0.34
SS18-221ENST00000582448 H7C1D1 291 aa12.9□□□□□ -0.34
SS18-221ENST00000582448 CA12O43570 354 aa12.9□□□□□ -0.34
SS18-221ENST00000582448 PLIN1O60240 522 aa12.9□□□□□ -0.34
SS18-221ENST00000582448 SKIP12755 728 aa12.9□□□□□ -0.34
SS18-221ENST00000582448 RARSP54136 660 aaKnown RBP12.9□□□□□ -0.34
SS18-221ENST00000582448 TNIP1Q15025 636 aa12.9□□□□□ -0.34
SS18-221ENST00000582448 DLK2Q6UY11 383 aa12.9□□□□□ -0.34
SS18-221ENST00000582448 CDC37L1Q7L3B6 337 aa12.9□□□□□ -0.34
SS18-221ENST00000582448 TRPM4Q8TD43 1214 aa12.9□□□□□ -0.34
SS18-221ENST00000582448 NANOS1Q8WY41 292 aaKnown RBP12.9□□□□□ -0.34
SS18-221ENST00000582448 VPS33BQ9H267 617 aa12.9□□□□□ -0.34
SS18-221ENST00000582448 CNOT7Q9UIV1 285 aaKnown RBP12.9□□□□□ -0.34
SS18-221ENST00000582448 BBOX1O75936 387 aa12.89□□□□□ -0.35
SS18-221ENST00000582448 INSM1Q01101 510 aaPredicted RBP12.89□□□□□ -0.35
SS18-221ENST00000582448 DDX46Q7L014 1031 aaKnown RBP12.89□□□□□ -0.35
SS18-221ENST00000582448 SP8Q8IXZ3 490 aa12.89□□□□□ -0.35
SS18-221ENST00000582448 VWA5B2Q8N398 1253 aa12.89□□□□□ -0.35
SS18-221ENST00000582448 FRAT1Q92837 279 aaPredicted RBP12.89□□□□□ -0.35
SS18-221ENST00000582448 ZIC5Q96T25 663 aa12.89□□□□□ -0.35
SS18-221ENST00000582448 TSPYL4Q9UJ04 414 aa12.89□□□□□ -0.35
SS18-221ENST00000582448 SPATA31C2B4DYI2 1134 aa12.88□□□□□ -0.35
SS18-221ENST00000582448 BCAR3O75815 825 aa12.88□□□□□ -0.35
SS18-221ENST00000582448 HUNKP57058 714 aa12.88□□□□□ -0.35
SS18-221ENST00000582448 PDE3AQ14432 1141 aa12.88□□□□□ -0.35
SS18-221ENST00000582448 SLC10A5Q5PT55 438 aa12.88□□□□□ -0.35
SS18-221ENST00000582448 HDGFL1Q5TGJ6 251 aa12.88□□□□□ -0.35
SS18-221ENST00000582448 RTFDC1Q9BY42 306 aaPredicted RBP12.88□□□□□ -0.35
SS18-221ENST00000582448 SMC4Q9NTJ3 1288 aa12.88□□□□□ -0.35
SS18-221ENST00000582448 IBTKQ9P2D0 1353 aaPredicted RBP12.88□□□□□ -0.35
SS18-221ENST00000582448 RIC1Q4ADV7 1423 aa12.88□□□□□ -0.35
SS18-221ENST00000582448 IPO8O15397 1037 aaKnown RBP12.87□□□□□ -0.35
SS18-221ENST00000582448 KRT76Q01546 638 aa12.87□□□□□ -0.35
SS18-221ENST00000582448 KIAA2012Q0VF49 1180 aa12.87□□□□□ -0.35
SS18-221ENST00000582448 PROSER3Q2NL68 480 aa12.87□□□□□ -0.35
SS18-221ENST00000582448 EXOC6Q8TAG9 804 aa12.87□□□□□ -0.35
SS18-221ENST00000582448 HHIPL1Q96JK4 782 aa12.87□□□□□ -0.35
SS18-221ENST00000582448 UCN2Q96RP3 112 aa12.87□□□□□ -0.35
SS18-221ENST00000582448 PGAP2Q9UHJ9 254 aa12.87□□□□□ -0.35
SS18-221ENST00000582448 TRMT112Q9UI30 125 aaKnown RBP12.87□□□□□ -0.35
SS18-221ENST00000582448 NUP98P52948 1817 aa12.87□□□□□ -0.35
SS18-221ENST00000582448 KIF16BQ96L93 1317 aa12.87□□□□□ -0.35
SS18-221ENST00000582448 CDC14CA4D256 554 aa12.86□□□□□ -0.35
SS18-221ENST00000582448 YDJCA8MPS7 323 aa12.86□□□□□ -0.35
SS18-221ENST00000582448 ZNF853P0CG23 659 aa12.86□□□□□ -0.35
SS18-221ENST00000582448 NOGQ13253 232 aa12.86□□□□□ -0.35
SS18-221ENST00000582448 GRAPQ13588 217 aa12.86□□□□□ -0.35
SS18-221ENST00000582448 ALDH1L2Q3SY69 923 aa12.86□□□□□ -0.35
SS18-221ENST00000582448 TBC1D10BQ4KMP7 808 aaPredicted RBP12.86□□□□□ -0.35
SS18-221ENST00000582448 COPS6Q7L5N1 327 aa12.86□□□□□ -0.35
SS18-221ENST00000582448 GRAPLQ8TC17 118 aaPredicted RBP12.86□□□□□ -0.35
SS18-221ENST00000582448 TRPM7Q96QT4 1865 aa12.86□□□□□ -0.35
SS18-221ENST00000582448 CASP8AP2Q9UKL3 1982 aa12.85□□□□□ -0.35
SS18-221ENST00000582448 AAMPQ13685 434 aa12.85□□□□□ -0.35
SS18-221ENST00000582448 ZKSCAN2Q63HK3 967 aa12.85□□□□□ -0.35
SS18-221ENST00000582448 NLRP10Q86W26 655 aa12.85□□□□□ -0.35
SS18-221ENST00000582448 XAGE3Q8WTP9 111 aa12.85□□□□□ -0.35
SS18-221ENST00000582448 CRBNQ96SW2 442 aa12.85□□□□□ -0.35
SS18-221ENST00000582448 DBNDD1Q9H9R9 158 aa12.85□□□□□ -0.35
SS18-221ENST00000582448 MBIPQ9NS73 344 aa12.85□□□□□ -0.35
SS18-221ENST00000582448 NSFL1CQ9UNZ2 370 aaKnown RBP12.85□□□□□ -0.35
SS18-221ENST00000582448 PSMD14O00487 310 aa12.84□□□□□ -0.35
SS18-221ENST00000582448 CHL1O00533 1208 aa12.84□□□□□ -0.35
SS18-221ENST00000582448 ZNF157P51786 506 aaPredicted RBP12.84□□□□□ -0.35
SS18-221ENST00000582448 NCOA4Q13772 614 aa12.84□□□□□ -0.35
SS18-221ENST00000582448 HSP90AB3PQ58FF7 597 aa12.84□□□□□ -0.35
SS18-221ENST00000582448 B4GALNT3Q6L9W6 998 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms