RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 GOLGB1Q14789 3259 aaKnown RBP26.37■■□□□ 1.81
CCDC47-204ENST00000582252 SLC3A2P08195 630 aaKnown RBP26.37■■□□□ 1.81
CCDC47-204ENST00000582252 GUCY1B3Q02153 619 aa26.37■■□□□ 1.81
CCDC47-204ENST00000582252 WASF1Q92558 559 aa26.37■■□□□ 1.81
CCDC47-204ENST00000582252 INCENPQ9NQS7 918 aa26.37■■□□□ 1.81
CCDC47-204ENST00000582252 CCDC196A0A1B0GTZ2 297 aa26.36■■□□□ 1.81
CCDC47-204ENST00000582252 LDHBP07195 334 aaKnown RBP26.36■■□□□ 1.81
CCDC47-204ENST00000582252 PRDX5P30044 214 aa26.36■■□□□ 1.81
CCDC47-204ENST00000582252 IARSP41252 1262 aaKnown RBP26.36■■□□□ 1.81
CCDC47-204ENST00000582252 NKX2-3Q8TAU0 364 aa26.36■■□□□ 1.81
CCDC47-204ENST00000582252 BICD2Q8TD16 824 aa26.36■■□□□ 1.81
CCDC47-204ENST00000582252 TRIM44Q96DX7 344 aaPredicted RBP26.36■■□□□ 1.81
CCDC47-204ENST00000582252 PPP1R9BQ96SB3 815 aa26.36■■□□□ 1.81
CCDC47-204ENST00000582252 ZC3H12CQ9C0D7 883 aaKnown RBP26.36■■□□□ 1.81
CCDC47-204ENST00000582252 ZNF219Q9P2Y4 722 aaPredicted RBP26.36■■□□□ 1.81
CCDC47-204ENST00000582252 RCOR1Q9UKL0 485 aa26.36■■□□□ 1.81
CCDC47-204ENST00000582252 TACC3Q9Y6A5 838 aa26.36■■□□□ 1.81
CCDC47-204ENST00000582252 ADD1P35611 737 aaKnown RBP26.36■■□□□ 1.81
CCDC47-204ENST00000582252 NT5C2P49902 561 aa26.36■■□□□ 1.81
CCDC47-204ENST00000582252 CCDC93Q567U6 631 aa26.36■■□□□ 1.81
CCDC47-204ENST00000582252 RTFDC1Q9BY42 306 aaPredicted RBP26.36■■□□□ 1.81
CCDC47-204ENST00000582252 ARPP21Q9UBL0 812 aaPredicted RBP26.36■■□□□ 1.81
CCDC47-204ENST00000582252 ECM29Q5VYK3 1845 aa26.35■■□□□ 1.81
CCDC47-204ENST00000582252 PPP2R5BQ15173 497 aa26.35■■□□□ 1.81
CCDC47-204ENST00000582252 SOGA3Q5TF21 947 aa26.35■■□□□ 1.81
CCDC47-204ENST00000582252 CERS3Q8IU89 383 aa26.35■■□□□ 1.81
CCDC47-204ENST00000582252 ALG1Q9BT22 464 aa26.35■■□□□ 1.81
CCDC47-204ENST00000582252 NUP62CLQ9H1M0 184 aa26.35■■□□□ 1.81
CCDC47-204ENST00000582252 CD209Q9NNX6 404 aa26.35■■□□□ 1.81
CCDC47-204ENST00000582252 AATFQ9NY61 560 aaKnown RBP eCLIP26.35■■□□□ 1.81
CCDC47-204ENST00000582252 C21orf2O43822 256 aa26.34■■□□□ 1.81
CCDC47-204ENST00000582252 IL1R1P14778 569 aa26.34■■□□□ 1.81
CCDC47-204ENST00000582252 TRIM29Q14134 588 aa26.34■■□□□ 1.81
CCDC47-204ENST00000582252 SUPT20HQ8NEM7 779 aa26.34■■□□□ 1.81
CCDC47-204ENST00000582252 NOL10Q9BSC4 688 aaKnown RBP26.34■■□□□ 1.81
CCDC47-204ENST00000582252 PPFIA3O75145 1194 aa26.34■■□□□ 1.81
CCDC47-204ENST00000582252 LDHCP07864 332 aa26.34■■□□□ 1.81
CCDC47-204ENST00000582252 CDC27P30260 824 aa26.34■■□□□ 1.81
CCDC47-204ENST00000582252 SSRP1Q08945 709 aaKnown RBP26.34■■□□□ 1.81
CCDC47-204ENST00000582252 RTKN2Q8IZC4 609 aa26.34■■□□□ 1.81
CCDC47-204ENST00000582252 COA1Q9GZY4 146 aa26.34■■□□□ 1.81
CCDC47-204ENST00000582252 SENP2Q9HC62 589 aa26.34■■□□□ 1.81
CCDC47-204ENST00000582252 FGRP09769 529 aa26.33■■□□□ 1.81
CCDC47-204ENST00000582252 RTN1Q16799 776 aa26.33■■□□□ 1.81
CCDC47-204ENST00000582252 UVSSAQ2YD98 709 aa26.33■■□□□ 1.81
CCDC47-204ENST00000582252 SBK1Q52WX2 424 aa26.33■■□□□ 1.81
CCDC47-204ENST00000582252 DALRD3Q5D0E6 543 aaKnown RBP26.33■■□□□ 1.81
CCDC47-204ENST00000582252 CTR9Q6PD62 1173 aa26.33■■□□□ 1.81
CCDC47-204ENST00000582252 IQCA1Q86XH1 822 aa26.33■■□□□ 1.81
CCDC47-204ENST00000582252 BAG3O95817 575 aa26.32■■□□□ 1.8
CCDC47-204ENST00000582252 IFNAR1P17181 557 aa26.32■■□□□ 1.8
CCDC47-204ENST00000582252 RXRAP19793 462 aa26.32■■□□□ 1.8
CCDC47-204ENST00000582252 NTRK3Q16288 839 aa26.32■■□□□ 1.8
CCDC47-204ENST00000582252 TRIM22Q8IYM9 498 aa26.32■■□□□ 1.8
CCDC47-204ENST00000582252 ARFGEF1Q9Y6D6 1849 aa26.31■■□□□ 1.8
CCDC47-204ENST00000582252 RIMBP2O15034 1052 aa26.31■■□□□ 1.8
CCDC47-204ENST00000582252 LIG1P18858 919 aa26.31■■□□□ 1.8
CCDC47-204ENST00000582252 MAP3K11Q16584 847 aa26.31■■□□□ 1.8
CCDC47-204ENST00000582252 FAM43AQ8N2R8 423 aa26.31■■□□□ 1.8
CCDC47-204ENST00000582252 PGBD1Q96JS3 809 aa26.31■■□□□ 1.8
CCDC47-204ENST00000582252 USP28Q96RU2 1077 aa26.31■■□□□ 1.8
CCDC47-204ENST00000582252 DCP1AQ9NPI6 582 aaPredicted RBP26.31■■□□□ 1.8
CCDC47-204ENST00000582252 RTEL1Q9NZ71 1219 aa26.31■■□□□ 1.8
CCDC47-204ENST00000582252 MYH2Q9UKX2 1941 aa26.31■■□□□ 1.8
CCDC47-204ENST00000582252 FER1L6Q2WGJ9 1857 aa26.31■■□□□ 1.8
CCDC47-204ENST00000582252 USP17L12C9JPN9 530 aa26.31■■□□□ 1.8
CCDC47-204ENST00000582252 USP17L21D6R901 530 aa26.31■■□□□ 1.8
CCDC47-204ENST00000582252 FMNL1O95466 1100 aaPredicted RBP26.31■■□□□ 1.8
CCDC47-204ENST00000582252 STK11IPQ8N1F8 1099 aa26.31■■□□□ 1.8
CCDC47-204ENST00000582252 ZKSCAN3Q9BRR0 538 aa26.31■■□□□ 1.8
CCDC47-204ENST00000582252 TNKSO95271 1327 aa26.3■■□□□ 1.8
CCDC47-204ENST00000582252 ORC4O43929 436 aa26.3■■□□□ 1.8
CCDC47-204ENST00000582252 CCDC192P0DO97 292 aa26.3■■□□□ 1.8
CCDC47-204ENST00000582252 CCDC144CPQ8IYA2 1237 aa26.3■■□□□ 1.8
CCDC47-204ENST00000582252 ZNF654Q8IZM8 581 aa26.3■■□□□ 1.8
CCDC47-204ENST00000582252 FAM217BQ9NTX9 383 aaPredicted RBP26.3■■□□□ 1.8
CCDC47-204ENST00000582252 YEATS4O95619 227 aa26.29■■□□□ 1.8
CCDC47-204ENST00000582252 KIF23Q02241 960 aaPredicted RBP26.29■■□□□ 1.8
CCDC47-204ENST00000582252 CEBPZQ03701 1054 aaKnown RBP26.29■■□□□ 1.8
CCDC47-204ENST00000582252 PDE4BQ07343 736 aa26.29■■□□□ 1.8
CCDC47-204ENST00000582252 SEC23AQ15436 765 aa26.29■■□□□ 1.8
CCDC47-204ENST00000582252 AMOTL1Q8IY63 956 aa26.29■■□□□ 1.8
CCDC47-204ENST00000582252 ZSCAN10Q96SZ4 725 aaPredicted RBP26.29■■□□□ 1.8
CCDC47-204ENST00000582252 PSMD1Q99460 953 aa26.29■■□□□ 1.8
CCDC47-204ENST00000582252 MYL10Q9BUA6 226 aa26.29■■□□□ 1.8
CCDC47-204ENST00000582252 TNMDQ9H2S6 317 aa26.29■■□□□ 1.8
CCDC47-204ENST00000582252 DACT1Q9NYF0 836 aa26.29■■□□□ 1.8
CCDC47-204ENST00000582252 GNL2Q13823 731 aaKnown RBP26.28■■□□□ 1.8
CCDC47-204ENST00000582252 MYSM1Q5VVJ2 828 aa26.28■■□□□ 1.8
CCDC47-204ENST00000582252 KCNG4Q8TDN1 519 aa26.28■■□□□ 1.8
CCDC47-204ENST00000582252 PHKBQ93100 1093 aa26.28■■□□□ 1.8
CCDC47-204ENST00000582252 SLC26A6Q9BXS9 759 aa26.28■■□□□ 1.8
CCDC47-204ENST00000582252 CLSTN2Q9H4D0 955 aa26.28■■□□□ 1.8
CCDC47-204ENST00000582252 POLR3EQ9NVU0 708 aa26.28■■□□□ 1.8
CCDC47-204ENST00000582252 G3V3G9 751 aa26.28■■□□□ 1.8
CCDC47-204ENST00000582252 RANBP6O60518 1105 aaKnown RBP26.28■■□□□ 1.8
CCDC47-204ENST00000582252 CALM1P0DP23 149 aa26.28■■□□□ 1.8
CCDC47-204ENST00000582252 CALM2P0DP24 149 aa26.28■■□□□ 1.8
CCDC47-204ENST00000582252 CALM3P0DP25 149 aa26.28■■□□□ 1.8
CCDC47-204ENST00000582252 DCAF8Q5TAQ9 597 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms