RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 IL1RAPL2Q9NP60 686 aa11.92□□□□□ -0.5
TOP3A-211ENST00000581536 TMOD2Q9NZR1 351 aa11.92□□□□□ -0.5
TOP3A-211ENST00000581536 RAI14Q9P0K7 980 aa11.92□□□□□ -0.5
TOP3A-211ENST00000581536 GAKO14976 1311 aa11.91□□□□□ -0.5
TOP3A-211ENST00000581536 PDS5AQ29RF7 1337 aaKnown RBP11.91□□□□□ -0.5
TOP3A-211ENST00000581536 UQCRFS1P1P0C7P4 283 aa11.91□□□□□ -0.5
TOP3A-211ENST00000581536 BTDP43251 543 aa11.91□□□□□ -0.5
TOP3A-211ENST00000581536 ZAP70P43403 619 aa11.91□□□□□ -0.5
TOP3A-211ENST00000581536 PDE3AQ14432 1141 aa11.91□□□□□ -0.5
TOP3A-211ENST00000581536 SH3BP5LQ7L8J4 393 aa11.91□□□□□ -0.5
TOP3A-211ENST00000581536 RPAP2Q8IXW5 612 aaPredicted RBP11.91□□□□□ -0.5
TOP3A-211ENST00000581536 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.91□□□□□ -0.5
TOP3A-211ENST00000581536 OPTNQ96CV9 577 aa11.91□□□□□ -0.5
TOP3A-211ENST00000581536 DDX4Q9NQI0 724 aaKnown RBP11.91□□□□□ -0.5
TOP3A-211ENST00000581536 LHX6Q9UPM6 363 aa11.91□□□□□ -0.5
TOP3A-211ENST00000581536 LAMB1P07942 1786 aa11.9□□□□□ -0.5
TOP3A-211ENST00000581536 GPR75-ASB3A0A0A6YYF3 556 aa11.9□□□□□ -0.5
TOP3A-211ENST00000581536 RGS3P49796 1198 aa11.9□□□□□ -0.5
TOP3A-211ENST00000581536 VGLL4Q14135 290 aa11.9□□□□□ -0.5
TOP3A-211ENST00000581536 RHPN1Q8TCX5 695 aa11.9□□□□□ -0.5
TOP3A-211ENST00000581536 PTPN18Q99952 460 aa11.9□□□□□ -0.5
TOP3A-211ENST00000581536 PIH1D3Q9NQM4 214 aaKnown RBP11.9□□□□□ -0.5
TOP3A-211ENST00000581536 SAGE1Q9NXZ1 904 aa11.9□□□□□ -0.5
TOP3A-211ENST00000581536 LRP2BPQ9P2M1 347 aa11.9□□□□□ -0.5
TOP3A-211ENST00000581536 MROH7-TTC4A0A0A0MT08 1334 aa11.89□□□□□ -0.51
TOP3A-211ENST00000581536 DDTLA6NHG4 134 aaPredicted RBP11.89□□□□□ -0.51
TOP3A-211ENST00000581536 UNCXA6NJT0 531 aa11.89□□□□□ -0.51
TOP3A-211ENST00000581536 IGF2BP3O00425 579 aaKnown RBP eCLIP11.89□□□□□ -0.51
TOP3A-211ENST00000581536 WDHD1O75717 1129 aaPredicted RBP11.89□□□□□ -0.51
TOP3A-211ENST00000581536 INPP5BP32019 993 aa11.89□□□□□ -0.51
TOP3A-211ENST00000581536 RHBDL3P58872 404 aa11.89□□□□□ -0.51
TOP3A-211ENST00000581536 PICALMQ13492 652 aa11.89□□□□□ -0.51
TOP3A-211ENST00000581536 ADGRA1Q86SQ6 560 aa11.89□□□□□ -0.51
TOP3A-211ENST00000581536 AACSQ86V21 672 aa11.89□□□□□ -0.51
TOP3A-211ENST00000581536 WRNIP1Q96S55 665 aa11.89□□□□□ -0.51
TOP3A-211ENST00000581536 IDI2Q9BXS1 227 aa11.89□□□□□ -0.51
TOP3A-211ENST00000581536 ANTXR1Q9H6X2 564 aa11.89□□□□□ -0.51
TOP3A-211ENST00000581536 SNCAIPQ9Y6H5 919 aa11.89□□□□□ -0.51
TOP3A-211ENST00000581536 FAM205CA6NFA0 338 aa11.88□□□□□ -0.51
TOP3A-211ENST00000581536 MANSC4A6NHS7 340 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-211ENST00000581536 SMARCA5O60264 1052 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-211ENST00000581536 LDHCP07864 332 aa11.88□□□□□ -0.51
TOP3A-211ENST00000581536 ZBTB48P10074 688 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-211ENST00000581536 SREBF2Q12772 1141 aa11.88□□□□□ -0.51
TOP3A-211ENST00000581536 DGKZQ13574 1117 aa11.88□□□□□ -0.51
TOP3A-211ENST00000581536 POTEGQ6S5H5 508 aa11.88□□□□□ -0.51
TOP3A-211ENST00000581536 SLF2Q8IX21 1173 aa11.88□□□□□ -0.51
TOP3A-211ENST00000581536 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-211ENST00000581536 SH3RF3Q8TEJ3 882 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-211ENST00000581536 ZNF512BQ96KM6 892 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-211ENST00000581536 MCOLN1Q9GZU1 580 aa11.88□□□□□ -0.51
TOP3A-211ENST00000581536 ZNF112Q9UJU3 913 aa11.88□□□□□ -0.51
TOP3A-211ENST00000581536 DOCK2Q92608 1830 aa11.88□□□□□ -0.51
TOP3A-211ENST00000581536 TESPA1A2RU30 521 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-211ENST00000581536 POTEMA6NI47 508 aa11.87□□□□□ -0.51
TOP3A-211ENST00000581536 ENTPD3O75355 529 aa11.87□□□□□ -0.51
TOP3A-211ENST00000581536 INHBEP58166 350 aa11.87□□□□□ -0.51
TOP3A-211ENST00000581536 NAA16Q6N069 864 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-211ENST00000581536 ERC1Q8IUD2 1116 aa11.87□□□□□ -0.51
TOP3A-211ENST00000581536 ZSCAN29Q8IWY8 852 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-211ENST00000581536 ZNF296Q8WUU4 475 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-211ENST00000581536 ABHD8Q96I13 439 aa11.87□□□□□ -0.51
TOP3A-211ENST00000581536 ZNF341Q9BYN7 854 aa11.87□□□□□ -0.51
TOP3A-211ENST00000581536 CSADQ9Y600 493 aa11.87□□□□□ -0.51
TOP3A-211ENST00000581536 MYH1P12882 1939 aa11.86□□□□□ -0.51
TOP3A-211ENST00000581536 FAM196BA6NMK8 535 aa11.86□□□□□ -0.51
TOP3A-211ENST00000581536 PHF20L1A8MW92 1017 aa11.86□□□□□ -0.51
TOP3A-211ENST00000581536 GPR25O00155 361 aa11.86□□□□□ -0.51
TOP3A-211ENST00000581536 IRF6O14896 467 aa11.86□□□□□ -0.51
TOP3A-211ENST00000581536 DYNLL1P63167 89 aaKnown RBP11.86□□□□□ -0.51
TOP3A-211ENST00000581536 GSTO1P78417 241 aa11.86□□□□□ -0.51
TOP3A-211ENST00000581536 HSP90AB4PQ58FF6 505 aa11.86□□□□□ -0.51
TOP3A-211ENST00000581536 VARS2Q5ST30 1063 aaKnown RBP11.86□□□□□ -0.51
TOP3A-211ENST00000581536 DCAF15Q66K64 600 aa11.86□□□□□ -0.51
TOP3A-211ENST00000581536 BRI3BPQ8WY22 251 aa11.86□□□□□ -0.51
TOP3A-211ENST00000581536 KIF1BPQ96EK5 621 aa11.86□□□□□ -0.51
TOP3A-211ENST00000581536 AATFQ9NY61 560 aaKnown RBP eCLIP11.86□□□□□ -0.51
TOP3A-211ENST00000581536 FOCADQ5VW36 1801 aa11.86□□□□□ -0.51
TOP3A-211ENST00000581536 PHIPQ8WWQ0 1821 aa11.86□□□□□ -0.51
TOP3A-211ENST00000581536 RFX7Q2KHR2 1363 aa11.85□□□□□ -0.51
TOP3A-211ENST00000581536 RAB11FIP3O75154 756 aa11.85□□□□□ -0.51
TOP3A-211ENST00000581536 HMMRO75330 724 aa11.85□□□□□ -0.51
TOP3A-211ENST00000581536 MAP3K10Q02779 954 aa11.85□□□□□ -0.51
TOP3A-211ENST00000581536 CLASRPQ8N2M8 674 aaKnown RBP11.85□□□□□ -0.51
TOP3A-211ENST00000581536 EDC3Q96F86 508 aaKnown RBP11.85□□□□□ -0.51
TOP3A-211ENST00000581536 HS3ST6Q96QI5 342 aa11.85□□□□□ -0.51
TOP3A-211ENST00000581536 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.85□□□□□ -0.51
TOP3A-211ENST00000581536 PCDHB15Q9Y5E8 787 aa11.85□□□□□ -0.51
TOP3A-211ENST00000581536 SIPA1L1O43166 1804 aa11.84□□□□□ -0.51
TOP3A-211ENST00000581536 ATAD5Q96QE3 1844 aa11.84□□□□□ -0.51
TOP3A-211ENST00000581536 ATRNL1Q5VV63 1379 aa11.84□□□□□ -0.51
TOP3A-211ENST00000581536 RPAP1Q9BWH6 1393 aaPredicted RBP11.84□□□□□ -0.51
TOP3A-211ENST00000581536 CENPFP49454 3210 aa11.84□□□□□ -0.51
TOP3A-211ENST00000581536 CCL15-CCL14A0A0B4J2E2 113 aa11.84□□□□□ -0.51
TOP3A-211ENST00000581536 SPDYE5A6NIY4 337 aa11.84□□□□□ -0.51
TOP3A-211ENST00000581536 CCDC85CA6NKD9 419 aa11.84□□□□□ -0.51
TOP3A-211ENST00000581536 IDH1O75874 414 aaKnown RBP11.84□□□□□ -0.51
TOP3A-211ENST00000581536 IFIT2P09913 472 aaKnown RBP11.84□□□□□ -0.51
TOP3A-211ENST00000581536 CYP7A1P22680 504 aa11.84□□□□□ -0.51
TOP3A-211ENST00000581536 PPP4CP60510 307 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms