RNA–Protein interactions for RNA: ENST00000581523.5

MSI2-213, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2

Gene MSI2, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-213ENST00000581523 RREB1Q92766 1687 aa6.11□□□□□ -1.43
MSI2-213ENST00000581523 SSH2Q76I76 1423 aa6.11□□□□□ -1.43
MSI2-213ENST00000581523 RLBP1P12271 317 aa6.11□□□□□ -1.43
MSI2-213ENST00000581523 CD33P20138 364 aa6.11□□□□□ -1.43
MSI2-213ENST00000581523 ITGA6P23229 1130 aa6.11□□□□□ -1.43
MSI2-213ENST00000581523 DNAJA1P31689 397 aaKnown RBP6.11□□□□□ -1.43
MSI2-213ENST00000581523 NEUROD1Q13562 356 aa6.11□□□□□ -1.43
MSI2-213ENST00000581523 CCDC85BQ15834 202 aaPredicted RBP6.11□□□□□ -1.43
MSI2-213ENST00000581523 DTHD1Q6ZMT9 781 aa6.11□□□□□ -1.43
MSI2-213ENST00000581523 RELL1Q8IUW5 271 aa6.11□□□□□ -1.43
MSI2-213ENST00000581523 TRPM4Q8TD43 1214 aa6.11□□□□□ -1.43
MSI2-213ENST00000581523 BHMTQ93088 406 aa6.11□□□□□ -1.43
MSI2-213ENST00000581523 CDK19Q9BWU1 502 aa6.11□□□□□ -1.43
MSI2-213ENST00000581523 BHLHE41Q9C0J9 482 aaPredicted RBP6.11□□□□□ -1.43
MSI2-213ENST00000581523 PHF24Q9UPV7 400 aa6.11□□□□□ -1.43
MSI2-213ENST00000581523 CAMTA1Q9Y6Y1 1673 aa6.1□□□□□ -1.43
MSI2-213ENST00000581523 POLR3AO14802 1390 aaPredicted RBP6.1□□□□□ -1.43
MSI2-213ENST00000581523 ACEP12821 1306 aa6.1□□□□□ -1.43
MSI2-213ENST00000581523 SPATA31A5Q5VU36 1347 aa6.1□□□□□ -1.43
MSI2-213ENST00000581523 SPATA31A7Q8IWB4 1347 aa6.1□□□□□ -1.43
MSI2-213ENST00000581523 NFKBIEO00221 500 aa6.1□□□□□ -1.43
MSI2-213ENST00000581523 ITPKAP23677 461 aa6.1□□□□□ -1.43
MSI2-213ENST00000581523 RBL2Q08999 1139 aa6.1□□□□□ -1.43
MSI2-213ENST00000581523 PAK2Q13177 524 aa6.1□□□□□ -1.43
MSI2-213ENST00000581523 TMEM102Q8N9M5 508 aaPredicted RBP6.1□□□□□ -1.43
MSI2-213ENST00000581523 RASGRP4Q8TDF6 673 aa6.1□□□□□ -1.43
MSI2-213ENST00000581523 DHX38Q92620 1227 aaKnown RBP6.1□□□□□ -1.43
MSI2-213ENST00000581523 NXPE3Q969Y0 559 aa6.1□□□□□ -1.43
MSI2-213ENST00000581523 GTPBP3Q969Y2 492 aaKnown RBP6.1□□□□□ -1.43
MSI2-213ENST00000581523 GPRASP2Q96D09 838 aa6.1□□□□□ -1.43
MSI2-213ENST00000581523 SPACA7Q96KW9 195 aa6.1□□□□□ -1.43
MSI2-213ENST00000581523 TRIM47Q96LD4 638 aa6.1□□□□□ -1.43
MSI2-213ENST00000581523 TMEM74Q96NL1 305 aa6.1□□□□□ -1.43
MSI2-213ENST00000581523 AKAP2Q9Y2D5 859 aa6.1□□□□□ -1.43
MSI2-213ENST00000581523 RGPD5Q99666 1765 aa6.1□□□□□ -1.43
MSI2-213ENST00000581523 PARP4Q9UKK3 1724 aaKnown RBP6.1□□□□□ -1.43
MSI2-213ENST00000581523 COL5A2P05997 1499 aaPredicted RBP6.09□□□□□ -1.43
MSI2-213ENST00000581523 CENPJQ9HC77 1338 aaPredicted RBP6.09□□□□□ -1.43
MSI2-213ENST00000581523 MON2Q7Z3U7 1717 aa6.09□□□□□ -1.43
MSI2-213ENST00000581523 LOC102724428A0A0B4J2F2 783 aa6.09□□□□□ -1.43
MSI2-213ENST00000581523 ACPPP15309 386 aa6.09□□□□□ -1.43
MSI2-213ENST00000581523 ATF4P18848 351 aaPredicted RBP6.09□□□□□ -1.43
MSI2-213ENST00000581523 FGFR3P22607 806 aa6.09□□□□□ -1.43
MSI2-213ENST00000581523 BAG6P46379 1132 aa6.09□□□□□ -1.43
MSI2-213ENST00000581523 GRIA4P48058 902 aa6.09□□□□□ -1.43
MSI2-213ENST00000581523 SIK1P57059 783 aa6.09□□□□□ -1.43
MSI2-213ENST00000581523 GPLD1P80108 840 aa6.09□□□□□ -1.43
MSI2-213ENST00000581523 RPS26P11Q5JNZ5 115 aaPredicted RBP6.09□□□□□ -1.43
MSI2-213ENST00000581523 DPH6Q7L8W6 267 aa6.09□□□□□ -1.43
MSI2-213ENST00000581523 RAB44Q7Z6P3 723 aaPredicted RBP6.09□□□□□ -1.43
MSI2-213ENST00000581523 SPATA32Q96LK8 384 aa6.09□□□□□ -1.43
MSI2-213ENST00000581523 NSUN5Q96P11 429 aaKnown RBP6.09□□□□□ -1.43
MSI2-213ENST00000581523 SPON2Q9BUD6 331 aa6.09□□□□□ -1.43
MSI2-213ENST00000581523 CEP44Q9C0F1 390 aa6.09□□□□□ -1.43
MSI2-213ENST00000581523 KCNQ5Q9NR82 932 aa6.09□□□□□ -1.43
MSI2-213ENST00000581523 ADAMTS1Q9UHI8 967 aa6.09□□□□□ -1.43
MSI2-213ENST00000581523 SLIT3O75094 1523 aa6.09□□□□□ -1.44
MSI2-213ENST00000581523 USP6P35125 1406 aa6.08□□□□□ -1.44
MSI2-213ENST00000581523 ROCK2O75116 1388 aaKnown RBP6.08□□□□□ -1.44
MSI2-213ENST00000581523 USP19O94966 1318 aa6.08□□□□□ -1.44
MSI2-213ENST00000581523 SPATA31A1Q5TZJ5 1347 aa6.08□□□□□ -1.44
MSI2-213ENST00000581523 ZBTB42B2RXF5 422 aa6.08□□□□□ -1.44
MSI2-213ENST00000581523 TRIM37O94972 964 aa6.08□□□□□ -1.44
MSI2-213ENST00000581523 FGRP09769 529 aa6.08□□□□□ -1.44
MSI2-213ENST00000581523 GTF2F1P35269 517 aaKnown RBP eCLIP6.08□□□□□ -1.443e-53■■■■■ 57.5
MSI2-213ENST00000581523 EIF4A3P38919 411 aaKnown RBP6.08□□□□□ -1.44
MSI2-213ENST00000581523 PCSK7Q16549 785 aa6.08□□□□□ -1.44
MSI2-213ENST00000581523 SPRED3Q2MJR0 410 aa6.08□□□□□ -1.44
MSI2-213ENST00000581523 MCF2L2Q86YR7 1114 aa6.08□□□□□ -1.44
MSI2-213ENST00000581523 KIAA0825Q8IV33 1275 aa6.08□□□□□ -1.44
MSI2-213ENST00000581523 SEC16BQ96JE7 1060 aa6.08□□□□□ -1.44
MSI2-213ENST00000581523 DNAJC2Q99543 621 aaKnown RBP6.08□□□□□ -1.44
MSI2-213ENST00000581523 TRIM56Q9BRZ2 755 aaKnown RBP6.08□□□□□ -1.44
MSI2-213ENST00000581523 PBX4Q9BYU1 374 aa6.08□□□□□ -1.44
MSI2-213ENST00000581523 LTN1O94822 1766 aa6.08□□□□□ -1.44
MSI2-213ENST00000581523 A0A096LPE4 126 aa6.07□□□□□ -1.44
MSI2-213ENST00000581523 A0A1W2PPZ6 126 aa6.07□□□□□ -1.44
MSI2-213ENST00000581523 PDE2AO00408 941 aaPredicted RBP6.07□□□□□ -1.44
MSI2-213ENST00000581523 TRPA1O75762 1119 aa6.07□□□□□ -1.44
MSI2-213ENST00000581523 GBP2P32456 591 aaPredicted RBP6.07□□□□□ -1.44
MSI2-213ENST00000581523 EVA1CP58658 441 aa6.07□□□□□ -1.44
MSI2-213ENST00000581523 CTBSQ01459 385 aa6.07□□□□□ -1.44
MSI2-213ENST00000581523 EZH2Q15910 746 aaKnown RBP6.07□□□□□ -1.44
MSI2-213ENST00000581523 SOGA3Q5TF21 947 aa6.07□□□□□ -1.44
MSI2-213ENST00000581523 FOXR1Q6PIV2 292 aa6.07□□□□□ -1.44
MSI2-213ENST00000581523 TPTE2Q6XPS3 522 aa6.07□□□□□ -1.44
MSI2-213ENST00000581523 RHOVQ96L33 236 aa6.07□□□□□ -1.44
MSI2-213ENST00000581523 NECAB3Q96P71 396 aaPredicted RBP6.07□□□□□ -1.44
MSI2-213ENST00000581523 TRERF1Q96PN7 1200 aa6.07□□□□□ -1.44
MSI2-213ENST00000581523 HHIPQ96QV1 700 aa6.07□□□□□ -1.44
MSI2-213ENST00000581523 SIN3AQ96ST3 1273 aa6.07□□□□□ -1.44
MSI2-213ENST00000581523 PEAK1Q9H792 1746 aa6.07□□□□□ -1.44
MSI2-213ENST00000581523 DISP2A7MBM2 1401 aa6.07□□□□□ -1.44
MSI2-213ENST00000581523 SBF2Q86WG5 1849 aa6.06□□□□□ -1.44
MSI2-213ENST00000581523 COL18A1P39060 1754 aa6.06□□□□□ -1.44
MSI2-213ENST00000581523 NFAT5O94916 1531 aa6.06□□□□□ -1.44
MSI2-213ENST00000581523 METTL12A8MUP2 240 aa6.06□□□□□ -1.44
MSI2-213ENST00000581523 MINDY4BA8MYZ0 360 aa6.06□□□□□ -1.44
MSI2-213ENST00000581523 J3QW42 95 aa6.06□□□□□ -1.44
MSI2-213ENST00000581523 FBXO24O75426 580 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms