RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 MAP7Q14244 749 aa7.54□□□□□ -1.2
SMCHD1-204ENST00000581226 PAOXQ6QHF9 649 aa7.54□□□□□ -1.2
SMCHD1-204ENST00000581226 SEMA6BQ9H3T3 888 aa7.54□□□□□ -1.2
SMCHD1-204ENST00000581226 KCNQ5Q9NR82 932 aa7.54□□□□□ -1.2
SMCHD1-204ENST00000581226 DDX41Q9UJV9 622 aaKnown RBP7.54□□□□□ -1.2
SMCHD1-204ENST00000581226 RACK1P63244 317 aaKnown RBP7.53□□□□□ -1.2
SMCHD1-204ENST00000581226 ZBTB37Q5TC79 503 aa7.53□□□□□ -1.2
SMCHD1-204ENST00000581226 FAM196AQ6ZSG2 479 aa7.53□□□□□ -1.2
SMCHD1-204ENST00000581226 CDC37L1Q7L3B6 337 aa7.53□□□□□ -1.2
SMCHD1-204ENST00000581226 KIAA0825Q8IV33 1275 aa7.53□□□□□ -1.2
SMCHD1-204ENST00000581226 ZNF654Q8IZM8 581 aa7.53□□□□□ -1.2
SMCHD1-204ENST00000581226 ISL2Q96A47 359 aa7.53□□□□□ -1.2
SMCHD1-204ENST00000581226 SPON2Q9BUD6 331 aa7.53□□□□□ -1.2
SMCHD1-204ENST00000581226 PCOLCE2Q9UKZ9 415 aa7.53□□□□□ -1.2
SMCHD1-204ENST00000581226 TLR3O15455 904 aaKnown RBP7.52□□□□□ -1.21
SMCHD1-204ENST00000581226 GREM1O60565 184 aa7.52□□□□□ -1.21
SMCHD1-204ENST00000581226 ETF1P62495 437 aaKnown RBP7.52□□□□□ -1.21
SMCHD1-204ENST00000581226 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.52□□□□□ -1.21
SMCHD1-204ENST00000581226 FBXO27Q8NI29 283 aa7.52□□□□□ -1.21
SMCHD1-204ENST00000581226 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.52□□□□□ -1.21
SMCHD1-204ENST00000581226 ROBO2Q9HCK4 1378 aa7.51□□□□□ -1.21
SMCHD1-204ENST00000581226 FSTP19883 344 aa7.51□□□□□ -1.21
SMCHD1-204ENST00000581226 NTF4P34130 210 aa7.51□□□□□ -1.21
SMCHD1-204ENST00000581226 MPP2Q14168 576 aa7.51□□□□□ -1.21
SMCHD1-204ENST00000581226 RNF43Q68DV7 783 aa7.51□□□□□ -1.21
SMCHD1-204ENST00000581226 ZNF507Q8TCN5 953 aa7.51□□□□□ -1.21
SMCHD1-204ENST00000581226 WNT10AQ9GZT5 417 aa7.51□□□□□ -1.21
SMCHD1-204ENST00000581226 TACC3Q9Y6A5 838 aa7.51□□□□□ -1.21
SMCHD1-204ENST00000581226 DYNC1LI2O43237 492 aaPredicted RBP7.5□□□□□ -1.21
SMCHD1-204ENST00000581226 GRK4P32298 578 aa7.5□□□□□ -1.21
SMCHD1-204ENST00000581226 APOBRQ0VD83 1088 aa7.5□□□□□ -1.21
SMCHD1-204ENST00000581226 NFIAQ12857 509 aa7.5□□□□□ -1.21
SMCHD1-204ENST00000581226 CWF19L2Q2TBE0 894 aaKnown RBP7.5□□□□□ -1.21
SMCHD1-204ENST00000581226 UBP1Q9NZI7 540 aa7.5□□□□□ -1.21
SMCHD1-204ENST00000581226 PRKAG2Q9UGJ0 569 aa7.5□□□□□ -1.21
SMCHD1-204ENST00000581226 GSC2O15499 205 aa7.49□□□□□ -1.21
SMCHD1-204ENST00000581226 IGLV1-40P01703 118 aa7.49□□□□□ -1.21
SMCHD1-204ENST00000581226 PGRP06401 933 aa7.49□□□□□ -1.21
SMCHD1-204ENST00000581226 ERCC5P28715 1186 aaPredicted RBP7.49□□□□□ -1.21
SMCHD1-204ENST00000581226 CRKP46108 304 aa7.49□□□□□ -1.21
SMCHD1-204ENST00000581226 PDE4BQ07343 736 aa7.49□□□□□ -1.21
SMCHD1-204ENST00000581226 PRSS36Q5K4E3 855 aa7.49□□□□□ -1.21
SMCHD1-204ENST00000581226 SEZ6L2Q6UXD5 910 aa7.49□□□□□ -1.21
SMCHD1-204ENST00000581226 REC114Q7Z4M0 266 aa7.49□□□□□ -1.21
SMCHD1-204ENST00000581226 FBXL6Q8N531 539 aa7.49□□□□□ -1.21
SMCHD1-204ENST00000581226 KCT2Q8NC54 265 aa7.49□□□□□ -1.21
SMCHD1-204ENST00000581226 EAF1Q96JC9 268 aaPredicted RBP7.49□□□□□ -1.21
SMCHD1-204ENST00000581226 MFSD14AQ96MC6 490 aa7.49□□□□□ -1.21
SMCHD1-204ENST00000581226 TBC1D32Q96NH3 1257 aa7.49□□□□□ -1.21
SMCHD1-204ENST00000581226 NT5C1AQ9BXI3 368 aa7.49□□□□□ -1.21
SMCHD1-204ENST00000581226 TGIF2Q9GZN2 237 aa7.49□□□□□ -1.21
SMCHD1-204ENST00000581226 C1GALT1Q9NS00 363 aa7.49□□□□□ -1.21
SMCHD1-204ENST00000581226 GRIN3BO60391 1043 aa7.48□□□□□ -1.21
SMCHD1-204ENST00000581226 RAD51AP2Q09MP3 1159 aa7.48□□□□□ -1.21
SMCHD1-204ENST00000581226 SEZ6Q53EL9 994 aa7.48□□□□□ -1.21
SMCHD1-204ENST00000581226 UBE3DQ7Z6J8 389 aa7.48□□□□□ -1.21
SMCHD1-204ENST00000581226 HID1Q8IV36 788 aa7.48□□□□□ -1.21
SMCHD1-204ENST00000581226 NKD1Q969G9 470 aa7.48□□□□□ -1.21
SMCHD1-204ENST00000581226 DBNDD2Q9BQY9 259 aa7.48□□□□□ -1.21
SMCHD1-204ENST00000581226 LRRC3Q9BY71 257 aa7.48□□□□□ -1.21
SMCHD1-204ENST00000581226 CCSER2Q9H7U1 834 aa7.48□□□□□ -1.21
SMCHD1-204ENST00000581226 FBRSQ9HAH7 460 aa7.48□□□□□ -1.21
SMCHD1-204ENST00000581226 POLR3KQ9Y2Y1 108 aaPredicted RBP7.48□□□□□ -1.21
SMCHD1-204ENST00000581226 CORINQ9Y5Q5 1042 aa7.48□□□□□ -1.21
SMCHD1-204ENST00000581226 ADMP35318 185 aa7.47□□□□□ -1.21
SMCHD1-204ENST00000581226 CDK5R2Q13319 367 aa7.47□□□□□ -1.21
SMCHD1-204ENST00000581226 SLC51AQ86UW1 340 aa7.47□□□□□ -1.21
SMCHD1-204ENST00000581226 GIMAP7Q8NHV1 300 aa7.47□□□□□ -1.21
SMCHD1-204ENST00000581226 ACBD3Q9H3P7 528 aa7.47□□□□□ -1.21
SMCHD1-204ENST00000581226 BRMS1Q9HCU9 246 aa7.47□□□□□ -1.21
SMCHD1-204ENST00000581226 IGSF5Q9NSI5 407 aa7.47□□□□□ -1.21
SMCHD1-204ENST00000581226 PLCG1P19174 1290 aa7.46□□□□□ -1.22
SMCHD1-204ENST00000581226 MCM4P33991 863 aa7.46□□□□□ -1.22
SMCHD1-204ENST00000581226 PAK2Q13177 524 aa7.46□□□□□ -1.22
SMCHD1-204ENST00000581226 NPM2Q86SE8 214 aaKnown RBP7.46□□□□□ -1.22
SMCHD1-204ENST00000581226 ZAR1Q86SH2 424 aa7.46□□□□□ -1.22
SMCHD1-204ENST00000581226 SHISA5Q8N114 240 aa7.46□□□□□ -1.22
SMCHD1-204ENST00000581226 WDR64B1ANS9 1081 aa7.45□□□□□ -1.22
SMCHD1-204ENST00000581226 SLBPQ14493 270 aaKnown RBP eCLIP7.45□□□□□ -1.22
SMCHD1-204ENST00000581226 NKG7Q16617 165 aa7.45□□□□□ -1.22
SMCHD1-204ENST00000581226 ARMCX6Q7L4S7 300 aa7.45□□□□□ -1.22
SMCHD1-204ENST00000581226 SHKBP1Q8TBC3 707 aa7.45□□□□□ -1.22
SMCHD1-204ENST00000581226 GATA6Q92908 595 aa7.45□□□□□ -1.22
SMCHD1-204ENST00000581226 ATG3Q9NT62 314 aa7.45□□□□□ -1.22
SMCHD1-204ENST00000581226 TJP2Q9UDY2 1190 aa7.45□□□□□ -1.22
SMCHD1-204ENST00000581226 ADAM30Q9UKF2 790 aa7.45□□□□□ -1.22
SMCHD1-204ENST00000581226 PCDHB14Q9Y5E9 798 aa7.45□□□□□ -1.22
SMCHD1-204ENST00000581226 PRR36Q9H6K5 1346 aa7.45□□□□□ -1.22
SMCHD1-204ENST00000581226 LRIG2O94898 1065 aa7.44□□□□□ -1.22
SMCHD1-204ENST00000581226 HTR3BO95264 441 aa7.44□□□□□ -1.22
SMCHD1-204ENST00000581226 F13BP05160 661 aa7.44□□□□□ -1.22
SMCHD1-204ENST00000581226 FAM87AP0C7U9 286 aa7.44□□□□□ -1.22
SMCHD1-204ENST00000581226 ZNF165P49910 485 aa7.44□□□□□ -1.22
SMCHD1-204ENST00000581226 GK5Q6ZS86 529 aa7.44□□□□□ -1.22
SMCHD1-204ENST00000581226 MCATQ8IVS2 390 aaKnown RBP7.44□□□□□ -1.22
SMCHD1-204ENST00000581226 SLITRK4Q8IW52 837 aa7.44□□□□□ -1.22
SMCHD1-204ENST00000581226 OSBPL1AQ9BXW6 950 aa7.44□□□□□ -1.22
SMCHD1-204ENST00000581226 FOXQ1Q9C009 403 aa7.44□□□□□ -1.22
SMCHD1-204ENST00000581226 INPP5FQ9Y2H2 1132 aa7.44□□□□□ -1.22
SMCHD1-204ENST00000581226 FAM170BA6NMN3 283 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 244 ms