RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 ROBO3Q96MS0 1386 aa16.34■□□□□ 0.21
CDK5RAP3-219ENST00000580670 CLRN2A0PK11 232 aa16.33■□□□□ 0.21
CDK5RAP3-219ENST00000580670 MYO1BO43795 1136 aa16.33■□□□□ 0.21
CDK5RAP3-219ENST00000580670 NPM3O75607 178 aaKnown RBP16.33■□□□□ 0.21
CDK5RAP3-219ENST00000580670 PRDM1O75626 825 aa16.33■□□□□ 0.21
CDK5RAP3-219ENST00000580670 FGRP09769 529 aa16.33■□□□□ 0.21
CDK5RAP3-219ENST00000580670 ANTXR2P58335 489 aa16.33■□□□□ 0.21
CDK5RAP3-219ENST00000580670 TOB2Q14106 344 aaPredicted RBP16.33■□□□□ 0.21
CDK5RAP3-219ENST00000580670 SPDYE2Q495Y8 402 aa16.33■□□□□ 0.21
CDK5RAP3-219ENST00000580670 RBM26Q5T8P6 1007 aaKnown RBP16.33■□□□□ 0.21
CDK5RAP3-219ENST00000580670 CYB5R4Q7L1T6 521 aa16.33■□□□□ 0.21
CDK5RAP3-219ENST00000580670 TTC6Q86TZ1 520 aa16.33■□□□□ 0.21
CDK5RAP3-219ENST00000580670 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.33■□□□□ 0.21
CDK5RAP3-219ENST00000580670 WDR19Q8NEZ3 1342 aa16.33■□□□□ 0.21
CDK5RAP3-219ENST00000580670 WNT10BO00744 389 aa16.33■□□□□ 0.2
CDK5RAP3-219ENST00000580670 ORC4O43929 436 aa16.33■□□□□ 0.2
CDK5RAP3-219ENST00000580670 NBPF9Q3BBW0 867 aa16.33■□□□□ 0.2
CDK5RAP3-219ENST00000580670 ZFPM1Q8IX07 1006 aa16.33■□□□□ 0.2
CDK5RAP3-219ENST00000580670 ESR2Q92731 530 aa16.33■□□□□ 0.2
CDK5RAP3-219ENST00000580670 TMX3Q96JJ7 454 aa16.33■□□□□ 0.2
CDK5RAP3-219ENST00000580670 ZSWIM5Q9P217 1185 aa16.33■□□□□ 0.2
CDK5RAP3-219ENST00000580670 H7C1D1 291 aa16.32■□□□□ 0.2
CDK5RAP3-219ENST00000580670 ENTPD3O75355 529 aa16.32■□□□□ 0.2
CDK5RAP3-219ENST00000580670 EGFRP00533 1210 aa16.32■□□□□ 0.2
CDK5RAP3-219ENST00000580670 SAMD7Q7Z3H4 446 aa16.32■□□□□ 0.2
CDK5RAP3-219ENST00000580670 SPRYD3Q8NCJ5 442 aa16.32■□□□□ 0.2
CDK5RAP3-219ENST00000580670 BRF1Q92994 677 aa16.32■□□□□ 0.2
CDK5RAP3-219ENST00000580670 VEZTQ9HBM0 779 aa16.32■□□□□ 0.2
CDK5RAP3-219ENST00000580670 GPRC5DQ9NZD1 345 aa16.32■□□□□ 0.2
CDK5RAP3-219ENST00000580670 TCP10L2B9ZVM9 353 aa16.31■□□□□ 0.2
CDK5RAP3-219ENST00000580670 RANBP6O60518 1105 aaKnown RBP16.31■□□□□ 0.2
CDK5RAP3-219ENST00000580670 DDNO94850 711 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP3-219ENST00000580670 HLA-DOAP06340 250 aa16.31■□□□□ 0.2
CDK5RAP3-219ENST00000580670 HSP90AA1P07900 732 aaKnown RBP16.31■□□□□ 0.2
CDK5RAP3-219ENST00000580670 TBC1D10BQ4KMP7 808 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP3-219ENST00000580670 DHX36Q9H2U1 1008 aaKnown RBP16.31■□□□□ 0.2
CDK5RAP3-219ENST00000580670 MKNK2Q9HBH9 465 aa16.31■□□□□ 0.2
CDK5RAP3-219ENST00000580670 KIF4BQ2VIQ3 1234 aa16.31■□□□□ 0.2
CDK5RAP3-219ENST00000580670 C16orf86Q6ZW13 317 aa16.31■□□□□ 0.2
CDK5RAP3-219ENST00000580670 ZSCAN29Q8IWY8 852 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP3-219ENST00000580670 SLC44A5Q8NCS7 719 aa16.31■□□□□ 0.2
CDK5RAP3-219ENST00000580670 ZSCAN31Q96LW9 406 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP3-219ENST00000580670 AGXT2Q9BYV1 514 aa16.31■□□□□ 0.2
CDK5RAP3-219ENST00000580670 ZNF287Q9HBT7 754 aa16.31■□□□□ 0.2
CDK5RAP3-219ENST00000580670 GPHNQ9NQX3 736 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP3-219ENST00000580670 TPCN1Q9ULQ1 816 aa16.31■□□□□ 0.2
CDK5RAP3-219ENST00000580670 CDK8P49336 464 aa16.3■□□□□ 0.2
CDK5RAP3-219ENST00000580670 FKBP1CQ5VVH2 108 aa16.3■□□□□ 0.2
CDK5RAP3-219ENST00000580670 FBXL16Q8N461 479 aa16.3■□□□□ 0.2
CDK5RAP3-219ENST00000580670 TMEM87BQ96K49 555 aa16.3■□□□□ 0.2
CDK5RAP3-219ENST00000580670 UTRNP46939 3433 aa16.3■□□□□ 0.2
CDK5RAP3-219ENST00000580670 DDTLA6NHG4 134 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-219ENST00000580670 IFIT3O14879 490 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-219ENST00000580670 APOBRQ0VD83 1088 aa16.29■□□□□ 0.2
CDK5RAP3-219ENST00000580670 SART3Q15020 963 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-219ENST00000580670 TMEM67Q5HYA8 995 aa16.29■□□□□ 0.2
CDK5RAP3-219ENST00000580670 SH3BP5LQ7L8J4 393 aa16.29■□□□□ 0.2
CDK5RAP3-219ENST00000580670 ZKSCAN3Q9BRR0 538 aa16.29■□□□□ 0.2
CDK5RAP3-219ENST00000580670 UBAC1Q9BSL1 405 aa16.29■□□□□ 0.2
CDK5RAP3-219ENST00000580670 SH2B1Q9NRF2 756 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-219ENST00000580670 SERPINB13Q9UIV8 391 aa16.29■□□□□ 0.2
CDK5RAP3-219ENST00000580670 ANGEL1Q9UNK9 670 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-219ENST00000580670 SH2B2O14492 632 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 LARGE1O95461 756 aa16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 LMOD1P29536 600 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 EPS15P42566 896 aa16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 ME3Q16798 604 aa16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 FAM47AQ5JRC9 791 aa16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 DPY19L2Q6NUT2 758 aa16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 ZNF444Q8N0Y2 327 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 IGDCC4Q8TDY8 1250 aa16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 FAM151AQ8WW52 585 aa16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 EHD4Q9H223 541 aa16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 FOXD4L1Q9NU39 408 aa16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 PI4KBQ9UBF8 816 aa16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 ATRNL1Q5VV63 1379 aa16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 ZC3H4Q9UPT8 1303 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 ERICH2A1L162 156 aa16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 TSPY2A6NKD2 308 aa16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 RASA1P20936 1047 aa16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 NT5C2P49902 561 aa16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 GABPAQ06546 454 aa16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 MTA3Q9BTC8 594 aa16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 SWAP70Q9UH65 585 aa16.28■□□□□ 0.2
CDK5RAP3-219ENST00000580670 COL2A1P02458 1487 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP3-219ENST00000580670 CNTNAP1P78357 1384 aa16.27■□□□□ 0.2
CDK5RAP3-219ENST00000580670 TFAP4Q01664 338 aa16.27■□□□□ 0.2
CDK5RAP3-219ENST00000580670 CUL4AQ13619 759 aa16.27■□□□□ 0.2
CDK5RAP3-219ENST00000580670 FAM83AQ86UY5 434 aa16.27■□□□□ 0.2
CDK5RAP3-219ENST00000580670 IQCA1Q86XH1 822 aa16.27■□□□□ 0.2
CDK5RAP3-219ENST00000580670 CRACR2BQ8N4Y2 399 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP3-219ENST00000580670 TRPM4Q8TD43 1214 aa16.27■□□□□ 0.2
CDK5RAP3-219ENST00000580670 LY9Q9HBG7 655 aa16.27■□□□□ 0.2
CDK5RAP3-219ENST00000580670 NAP1L2Q9ULW6 460 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP3-219ENST00000580670 TSPY3P0CV98 308 aa16.26■□□□□ 0.19
CDK5RAP3-219ENST00000580670 TSPY8P0CW00 308 aa16.26■□□□□ 0.19
CDK5RAP3-219ENST00000580670 TNNI2P48788 182 aa16.26■□□□□ 0.19
CDK5RAP3-219ENST00000580670 STK3Q13188 491 aa16.26■□□□□ 0.19
CDK5RAP3-219ENST00000580670 WTAPQ15007 396 aa16.26■□□□□ 0.19
CDK5RAP3-219ENST00000580670 CSRNP1Q96S65 589 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms