RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 SLC27A2O14975 620 aa18.91■□□□□ 0.62
CSNK1D-212ENST00000580061 HSPA4P34932 840 aa18.91■□□□□ 0.62
CSNK1D-212ENST00000580061 GABPAQ06546 454 aa18.91■□□□□ 0.62
CSNK1D-212ENST00000580061 CREB3L3Q68CJ9 461 aa18.91■□□□□ 0.62
CSNK1D-212ENST00000580061 METTL16Q86W50 562 aaKnown RBP18.91■□□□□ 0.62
CSNK1D-212ENST00000580061 FOXP4Q8IVH2 680 aaPredicted RBP18.91■□□□□ 0.62
CSNK1D-212ENST00000580061 NBPF3Q9H094 633 aa18.91■□□□□ 0.62
CSNK1D-212ENST00000580061 SERPINB13Q9UIV8 391 aa18.91■□□□□ 0.62
CSNK1D-212ENST00000580061 TRPM7Q96QT4 1865 aa18.9■□□□□ 0.62
CSNK1D-212ENST00000580061 CTDSPL2Q05D32 466 aa18.9■□□□□ 0.62
CSNK1D-212ENST00000580061 CDCA5Q96FF9 252 aa18.9■□□□□ 0.62
CSNK1D-212ENST00000580061 TBC1D12O60347 775 aa18.89■□□□□ 0.61
CSNK1D-212ENST00000580061 SLC3A2P08195 630 aaKnown RBP18.89■□□□□ 0.61
CSNK1D-212ENST00000580061 SLURP2P0DP57 97 aa18.89■□□□□ 0.61
CSNK1D-212ENST00000580061 MCCP23508 829 aa18.89■□□□□ 0.61
CSNK1D-212ENST00000580061 MAP3K10Q02779 954 aa18.89■□□□□ 0.61
CSNK1D-212ENST00000580061 SUPT20HL1Q3ZLR7 823 aa18.89■□□□□ 0.61
CSNK1D-212ENST00000580061 RNF20Q5VTR2 975 aa18.89■□□□□ 0.61
CSNK1D-212ENST00000580061 C16orf86Q6ZW13 317 aa18.89■□□□□ 0.61
CSNK1D-212ENST00000580061 TBC1D10CQ8IV04 446 aa18.89■□□□□ 0.61
CSNK1D-212ENST00000580061 CRACR2BQ8N4Y2 399 aaPredicted RBP18.89■□□□□ 0.61
CSNK1D-212ENST00000580061 KCNB2Q92953 911 aa18.89■□□□□ 0.61
CSNK1D-212ENST00000580061 HOOK2Q96ED9 719 aa18.89■□□□□ 0.61
CSNK1D-212ENST00000580061 DYNLL2Q96FJ2 89 aa18.89■□□□□ 0.61
CSNK1D-212ENST00000580061 HERC5Q9UII4 1024 aaKnown RBP18.89■□□□□ 0.61
CSNK1D-212ENST00000580061 TAOK2Q9UL54 1235 aa18.89■□□□□ 0.61
CSNK1D-212ENST00000580061 TAF6LQ9Y6J9 622 aa18.89■□□□□ 0.61
CSNK1D-212ENST00000580061 TRAF5O00463 557 aa18.88■□□□□ 0.61
CSNK1D-212ENST00000580061 TOMM70O94826 608 aa18.88■□□□□ 0.61
CSNK1D-212ENST00000580061 ITGBL1O95965 494 aaPredicted RBP18.88■□□□□ 0.61
CSNK1D-212ENST00000580061 STK11IPQ8N1F8 1099 aa18.88■□□□□ 0.61
CSNK1D-212ENST00000580061 DNAJC18Q9H819 358 aa18.88■□□□□ 0.61
CSNK1D-212ENST00000580061 UPF2Q9HAU5 1272 aaKnown RBP18.88■□□□□ 0.61
CSNK1D-212ENST00000580061 SWAP70Q9UH65 585 aa18.88■□□□□ 0.61
CSNK1D-212ENST00000580061 TACC3Q9Y6A5 838 aa18.88■□□□□ 0.61
CSNK1D-212ENST00000580061 FAM196BA6NMK8 535 aa18.87■□□□□ 0.61
CSNK1D-212ENST00000580061 FGRP09769 529 aa18.87■□□□□ 0.61
CSNK1D-212ENST00000580061 CDK8P49336 464 aa18.87■□□□□ 0.61
CSNK1D-212ENST00000580061 AKNAD1Q5T1N1 836 aa18.87■□□□□ 0.61
CSNK1D-212ENST00000580061 MIGA2Q7L4E1 593 aa18.87■□□□□ 0.61
CSNK1D-212ENST00000580061 RASEFQ8IZ41 740 aa18.87■□□□□ 0.61
CSNK1D-212ENST00000580061 SLC44A5Q8NCS7 719 aa18.87■□□□□ 0.61
CSNK1D-212ENST00000580061 RBM46Q8TBY0 533 aaKnown RBP18.87■□□□□ 0.61
CSNK1D-212ENST00000580061 STAG1Q8WVM7 1258 aa18.87■□□□□ 0.61
CSNK1D-212ENST00000580061 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.87■□□□□ 0.611e-6■■■■□ 21.8
CSNK1D-212ENST00000580061 ATAD5Q96QE3 1844 aa18.86■□□□□ 0.61
CSNK1D-212ENST00000580061 PAPPA2Q9BXP8 1791 aa18.86■□□□□ 0.61
CSNK1D-212ENST00000580061 E7EWF7 191 aa18.86■□□□□ 0.61
CSNK1D-212ENST00000580061 PCP11498 1178 aaKnown RBP18.86■□□□□ 0.61
CSNK1D-212ENST00000580061 ZKSCAN1P17029 563 aaPredicted RBP18.86■□□□□ 0.61
CSNK1D-212ENST00000580061 SHMT1P34896 483 aa18.86■□□□□ 0.61
CSNK1D-212ENST00000580061 FMR1Q06787 632 aaKnown RBP eCLIP18.86■□□□□ 0.61
CSNK1D-212ENST00000580061 PDE4BQ07343 736 aa18.86■□□□□ 0.61
CSNK1D-212ENST00000580061 TSGA10IPQ3SY00 556 aa18.86■□□□□ 0.61
CSNK1D-212ENST00000580061 DCAF15Q66K64 600 aa18.86■□□□□ 0.61
CSNK1D-212ENST00000580061 TATDN1Q6P1N9 297 aa18.86■□□□□ 0.61
CSNK1D-212ENST00000580061 STOX1Q6ZVD7 989 aa18.86■□□□□ 0.61
CSNK1D-212ENST00000580061 SMC1BQ8NDV3 1235 aa18.86■□□□□ 0.61
CSNK1D-212ENST00000580061 TRIM34Q9BYJ4 488 aa18.86■□□□□ 0.61
CSNK1D-212ENST00000580061 C22orf23Q9BZE7 217 aa18.86■□□□□ 0.61
CSNK1D-212ENST00000580061 RNF41Q9H4P4 317 aaPredicted RBP18.86■□□□□ 0.61
CSNK1D-212ENST00000580061 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.86■□□□□ 0.611e-7■■■■■ 30
CSNK1D-212ENST00000580061 INCENPQ9NQS7 918 aa18.86■□□□□ 0.61
CSNK1D-212ENST00000580061 SNX14Q9Y5W7 946 aa18.86■□□□□ 0.61
CSNK1D-212ENST00000580061 OTOFQ9HC10 1997 aa18.85■□□□□ 0.61
CSNK1D-212ENST00000580061 NF2P35240 595 aa18.85■□□□□ 0.61
CSNK1D-212ENST00000580061 MFSD6Q6ZSS7 791 aa18.85■□□□□ 0.61
CSNK1D-212ENST00000580061 MKNK2Q9HBH9 465 aa18.85■□□□□ 0.61
CSNK1D-212ENST00000580061 ZNF287Q9HBT7 754 aa18.85■□□□□ 0.61
CSNK1D-212ENST00000580061 NEDD4P46934 1319 aa18.84■□□□□ 0.61
CSNK1D-212ENST00000580061 ORC4O43929 436 aa18.84■□□□□ 0.61
CSNK1D-212ENST00000580061 PRDM1O75626 825 aa18.84■□□□□ 0.61
CSNK1D-212ENST00000580061 RBM25P49756 843 aaKnown RBP18.84■□□□□ 0.61
CSNK1D-212ENST00000580061 ZNF341Q9BYN7 854 aa18.84■□□□□ 0.61
CSNK1D-212ENST00000580061 FZD1Q9UP38 647 aa18.84■□□□□ 0.61
CSNK1D-212ENST00000580061 GREB1LQ9C091 1923 aaPredicted RBP18.84■□□□□ 0.61
CSNK1D-212ENST00000580061 PASKQ96RG2 1323 aa18.83■□□□□ 0.61
CSNK1D-212ENST00000580061 PHF20L1A8MW92 1017 aa18.83■□□□□ 0.6
CSNK1D-212ENST00000580061 PPP1R12BO60237 982 aaPredicted RBP18.83■□□□□ 0.6
CSNK1D-212ENST00000580061 USP2O75604 605 aaPredicted RBP18.83■□□□□ 0.6
CSNK1D-212ENST00000580061 RASA1P20936 1047 aa18.83■□□□□ 0.6
CSNK1D-212ENST00000580061 ANAPC15P60006 121 aa18.83■□□□□ 0.6
CSNK1D-212ENST00000580061 KRT32Q14532 448 aa18.83■□□□□ 0.6
CSNK1D-212ENST00000580061 CNNM2Q9H8M5 875 aa18.83■□□□□ 0.6
CSNK1D-212ENST00000580061 ZNF112Q9UJU3 913 aa18.83■□□□□ 0.6
CSNK1D-212ENST00000580061 DOCK1Q14185 1865 aa18.83■□□□□ 0.6
CSNK1D-212ENST00000580061 PRKG1Q13976 671 aa18.82■□□□□ 0.6
CSNK1D-212ENST00000580061 RRP1BQ14684 758 aaKnown RBP18.82■□□□□ 0.6
CSNK1D-212ENST00000580061 ADCK5Q3MIX3 580 aa18.82■□□□□ 0.6
CSNK1D-212ENST00000580061 CERKLQ49MI3 558 aaPredicted RBP18.82■□□□□ 0.6
CSNK1D-212ENST00000580061 RRP12Q5JTH9 1297 aaKnown RBP18.82■□□□□ 0.6
CSNK1D-212ENST00000580061 ZNF444Q8N0Y2 327 aaPredicted RBP18.82■□□□□ 0.6
CSNK1D-212ENST00000580061 NKX2-3Q8TAU0 364 aa18.82■□□□□ 0.6
CSNK1D-212ENST00000580061 KLRG1Q96E93 195 aa18.82■□□□□ 0.6
CSNK1D-212ENST00000580061 IL17RAQ96F46 866 aa18.82■□□□□ 0.6
CSNK1D-212ENST00000580061 TBC1D32Q96NH3 1257 aa18.82■□□□□ 0.6
CSNK1D-212ENST00000580061 KRT23Q9C075 422 aa18.82■□□□□ 0.6
CSNK1D-212ENST00000580061 ZNF408Q9H9D4 720 aa18.82■□□□□ 0.6
CSNK1D-212ENST00000580061 TOMM22Q9NS69 142 aa18.82■□□□□ 0.6
CSNK1D-212ENST00000580061 B4E1Z4 1266 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms