RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 NOL7Q9UMY1 257 aaKnown RBP6.42□□□□□ -1.38
CDH8-206ENST00000580044 USP31Q70CQ4 1352 aa6.42□□□□□ -1.38
CDH8-206ENST00000580044 CRYBG1Q9Y4K1 1723 aa6.42□□□□□ -1.38
CDH8-206ENST00000580044 DIP2AQ14689 1571 aa6.41□□□□□ -1.38
CDH8-206ENST00000580044 GNAI3P08754 354 aa6.41□□□□□ -1.38
CDH8-206ENST00000580044 CPB1P15086 417 aa6.41□□□□□ -1.38
CDH8-206ENST00000580044 NCLP19338 710 aaKnown RBP6.41□□□□□ -1.38
CDH8-206ENST00000580044 SDSP20132 328 aa6.41□□□□□ -1.38
CDH8-206ENST00000580044 AFF1P51825 1210 aaKnown RBP6.41□□□□□ -1.38
CDH8-206ENST00000580044 COL9A3Q14050 684 aaPredicted RBP6.41□□□□□ -1.38
CDH8-206ENST00000580044 MSL1Q68DK7 614 aa6.41□□□□□ -1.38
CDH8-206ENST00000580044 MCTP1Q6DN14 999 aa6.41□□□□□ -1.38
CDH8-206ENST00000580044 LRSAM1Q6UWE0 723 aa6.41□□□□□ -1.38
CDH8-206ENST00000580044 FMR1NBQ8N0W7 255 aaPredicted RBP6.41□□□□□ -1.38
CDH8-206ENST00000580044 NUDT16Q96DE0 195 aaKnown RBP6.41□□□□□ -1.38
CDH8-206ENST00000580044 PDLIM2Q96JY6 352 aa6.41□□□□□ -1.38
CDH8-206ENST00000580044 CALR3Q96L12 384 aaKnown RBP6.41□□□□□ -1.38
CDH8-206ENST00000580044 THUMPD2Q9BTF0 503 aaKnown RBP6.41□□□□□ -1.38
CDH8-206ENST00000580044 CHMP4AQ9BY43 222 aa6.41□□□□□ -1.38
CDH8-206ENST00000580044 FRRS1LQ9P0K9 344 aa6.41□□□□□ -1.38
CDH8-206ENST00000580044 CRB1P82279 1406 aa6.41□□□□□ -1.38
CDH8-206ENST00000580044 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.4□□□□□ -1.38
CDH8-206ENST00000580044 HTATSF1O43719 755 aaKnown RBP6.4□□□□□ -1.38
CDH8-206ENST00000580044 LETM1O95202 739 aaPredicted RBP6.4□□□□□ -1.38
CDH8-206ENST00000580044 PDIA4P13667 645 aaKnown RBP6.4□□□□□ -1.38
CDH8-206ENST00000580044 SELPP16109 830 aa6.4□□□□□ -1.38
CDH8-206ENST00000580044 IGFBP4P22692 258 aa6.4□□□□□ -1.38
CDH8-206ENST00000580044 ARSDP51689 593 aa6.4□□□□□ -1.38
CDH8-206ENST00000580044 CUL4AQ13619 759 aa6.4□□□□□ -1.38
CDH8-206ENST00000580044 CAVIN1Q6NZI2 390 aaKnown RBP6.4□□□□□ -1.38
CDH8-206ENST00000580044 NME9Q86XW9 330 aa6.4□□□□□ -1.38
CDH8-206ENST00000580044 FAM184AQ8NB25 1140 aa6.4□□□□□ -1.38
CDH8-206ENST00000580044 UCN2Q96RP3 112 aa6.4□□□□□ -1.38
CDH8-206ENST00000580044 STK31Q9BXU1 1019 aa6.4□□□□□ -1.38
CDH8-206ENST00000580044 VRTNQ9H8Y1 702 aa6.4□□□□□ -1.38
CDH8-206ENST00000580044 BABAM1Q9NWV8 329 aa6.4□□□□□ -1.38
CDH8-206ENST00000580044 TTC21AQ8NDW8 1320 aa6.4□□□□□ -1.39
CDH8-206ENST00000580044 FLT4P35916 1363 aa6.4□□□□□ -1.39
CDH8-206ENST00000580044 USP6P35125 1406 aa6.4□□□□□ -1.39
CDH8-206ENST00000580044 PTPRUQ92729 1446 aa6.4□□□□□ -1.39
CDH8-206ENST00000580044 TSPOAP1O95153 1857 aa6.39□□□□□ -1.39
CDH8-206ENST00000580044 ELL2O00472 640 aaPredicted RBP6.39□□□□□ -1.39
CDH8-206ENST00000580044 MAP3K6O95382 1288 aa6.39□□□□□ -1.39
CDH8-206ENST00000580044 GNAI2P04899 355 aa6.39□□□□□ -1.39
CDH8-206ENST00000580044 RARAP10276 462 aa6.39□□□□□ -1.39
CDH8-206ENST00000580044 PDE1AP54750 535 aa6.39□□□□□ -1.39
CDH8-206ENST00000580044 LRP8Q14114 963 aa6.39□□□□□ -1.39
CDH8-206ENST00000580044 IGF2-ASQ6U949 168 aa6.39□□□□□ -1.39
CDH8-206ENST00000580044 KIAA1211Q6ZU35 1233 aa6.39□□□□□ -1.39
CDH8-206ENST00000580044 GLMNQ92990 594 aa6.39□□□□□ -1.39
CDH8-206ENST00000580044 ZKSCAN5Q9Y2L8 839 aa6.39□□□□□ -1.39
CDH8-206ENST00000580044 ATP6V1DQ9Y5K8 247 aa6.39□□□□□ -1.39
CDH8-206ENST00000580044 SBNO1A3KN83 1393 aa6.39□□□□□ -1.39
CDH8-206ENST00000580044 KDRP35968 1356 aa6.39□□□□□ -1.39
CDH8-206ENST00000580044 C21orf2O43822 256 aa6.38□□□□□ -1.39
CDH8-206ENST00000580044 BRD1O95696 1058 aa6.38□□□□□ -1.39
CDH8-206ENST00000580044 MX1P20591 662 aa6.38□□□□□ -1.39
CDH8-206ENST00000580044 ITGB7P26010 798 aa6.38□□□□□ -1.39
CDH8-206ENST00000580044 IDH3AP50213 366 aa6.38□□□□□ -1.39
CDH8-206ENST00000580044 DPYDQ12882 1025 aa6.38□□□□□ -1.39
CDH8-206ENST00000580044 EIF4A2Q14240 407 aaKnown RBP6.38□□□□□ -1.39
CDH8-206ENST00000580044 UVSSAQ2YD98 709 aa6.38□□□□□ -1.39
CDH8-206ENST00000580044 SULT6B1Q6IMI4 303 aa6.38□□□□□ -1.39
CDH8-206ENST00000580044 SHISA2Q6UWI4 295 aa6.38□□□□□ -1.39
CDH8-206ENST00000580044 DHX32Q7L7V1 743 aaKnown RBP6.38□□□□□ -1.39
CDH8-206ENST00000580044 KRT25Q7Z3Z0 450 aa6.38□□□□□ -1.39
CDH8-206ENST00000580044 WAPLQ7Z5K2 1190 aa6.38□□□□□ -1.39
CDH8-206ENST00000580044 PROSER2Q86WR7 435 aaPredicted RBP6.38□□□□□ -1.39
CDH8-206ENST00000580044 FBXO11Q86XK2 927 aa6.38□□□□□ -1.39
CDH8-206ENST00000580044 ADAMTS19Q8TE59 1207 aa6.38□□□□□ -1.39
CDH8-206ENST00000580044 RTF1Q92541 710 aaKnown RBP6.38□□□□□ -1.39
CDH8-206ENST00000580044 LRRCC1Q9C099 1032 aa6.38□□□□□ -1.39
CDH8-206ENST00000580044 STAP2Q9UGK3 403 aa6.38□□□□□ -1.39
CDH8-206ENST00000580044 MAFBQ9Y5Q3 323 aaPredicted RBP6.38□□□□□ -1.39
CDH8-206ENST00000580044 WDR33Q9C0J8 1336 aaKnown RBP6.38□□□□□ -1.39
CDH8-206ENST00000580044 METP08581 1390 aa6.38□□□□□ -1.39
CDH8-206ENST00000580044 PIK3C2AO00443 1686 aa6.38□□□□□ -1.39
CDH8-206ENST00000580044 KDM3BQ7LBC6 1761 aa6.38□□□□□ -1.39
CDH8-206ENST00000580044 SALL3Q9BXA9 1300 aa6.37□□□□□ -1.39
CDH8-206ENST00000580044 FAM83GA6ND36 823 aa6.37□□□□□ -1.39
CDH8-206ENST00000580044 DYNC1I1O14576 645 aa6.37□□□□□ -1.39
CDH8-206ENST00000580044 RAB11FIP3O75154 756 aa6.37□□□□□ -1.39
CDH8-206ENST00000580044 PRPF40AO75400 957 aaKnown RBP6.37□□□□□ -1.39
CDH8-206ENST00000580044 GHRHP01286 108 aa6.37□□□□□ -1.39
CDH8-206ENST00000580044 PSAPP07602 524 aa6.37□□□□□ -1.39
CDH8-206ENST00000580044 NEK4P51957 841 aa6.37□□□□□ -1.39
CDH8-206ENST00000580044 RRS1Q15050 365 aaKnown RBP6.37□□□□□ -1.39
CDH8-206ENST00000580044 C11orf91Q3C1V1 193 aa6.37□□□□□ -1.39
CDH8-206ENST00000580044 CCDC30Q5VVM6 783 aa6.37□□□□□ -1.39
CDH8-206ENST00000580044 SLC51AQ86UW1 340 aa6.37□□□□□ -1.39
CDH8-206ENST00000580044 ANKMY2Q8IV38 441 aa6.37□□□□□ -1.39
CDH8-206ENST00000580044 TMEM87AQ8NBN3 555 aa6.37□□□□□ -1.39
CDH8-206ENST00000580044 TMX3Q96JJ7 454 aa6.37□□□□□ -1.39
CDH8-206ENST00000580044 MEIS3Q99687 375 aa6.37□□□□□ -1.39
CDH8-206ENST00000580044 TSPY26PQ9H489 355 aa6.37□□□□□ -1.39
CDH8-206ENST00000580044 LTN1O94822 1766 aa6.36□□□□□ -1.39
CDH8-206ENST00000580044 MARF1Q9Y4F3 1742 aaKnown RBP6.36□□□□□ -1.39
CDH8-206ENST00000580044 LMO7Q8WWI1 1683 aa6.36□□□□□ -1.39
CDH8-206ENST00000580044 PHRF1Q9P1Y6 1649 aaKnown RBP6.36□□□□□ -1.39
CDH8-206ENST00000580044 TMEM2Q9UHN6 1383 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms