RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 CTNND1O60716 968 aaKnown RBP21.12■□□□□ 0.97
ITGB4-205ENST00000579211 CETPP11597 493 aa21.12■□□□□ 0.97
ITGB4-205ENST00000579211 MX1P20591 662 aa21.12■□□□□ 0.97
ITGB4-205ENST00000579211 SNAPC2Q13487 334 aa21.12■□□□□ 0.97
ITGB4-205ENST00000579211 SLC4A8Q2Y0W8 1093 aa21.12■□□□□ 0.97
ITGB4-205ENST00000579211 NOL9Q5SY16 702 aaKnown RBP21.12■□□□□ 0.97
ITGB4-205ENST00000579211 SCYL3Q8IZE3 742 aa21.12■□□□□ 0.97
ITGB4-205ENST00000579211 HERC5Q9UII4 1024 aaKnown RBP21.12■□□□□ 0.97
ITGB4-205ENST00000579211 PHIPQ8WWQ0 1821 aa21.12■□□□□ 0.97
ITGB4-205ENST00000579211 PHF20L1A8MW92 1017 aa21.11■□□□□ 0.97
ITGB4-205ENST00000579211 IRF6O14896 467 aa21.11■□□□□ 0.97
ITGB4-205ENST00000579211 GLRX3O76003 335 aaKnown RBP21.11■□□□□ 0.97
ITGB4-205ENST00000579211 SLURP2P0DP57 97 aa21.11■□□□□ 0.97
ITGB4-205ENST00000579211 ADD2P35612 726 aa21.11■□□□□ 0.97
ITGB4-205ENST00000579211 MAP3K10Q02779 954 aa21.11■□□□□ 0.97
ITGB4-205ENST00000579211 LRRFIP1Q32MZ4 808 aaKnown RBP21.11■□□□□ 0.97
ITGB4-205ENST00000579211 FOXP4Q8IVH2 680 aaPredicted RBP21.11■□□□□ 0.97
ITGB4-205ENST00000579211 PTPRFP10586 1907 aa21.1■□□□□ 0.97
ITGB4-205ENST00000579211 POLR3DP05423 398 aaPredicted RBP21.1■□□□□ 0.97
ITGB4-205ENST00000579211 TTC6Q86TZ1 520 aa21.1■□□□□ 0.97
ITGB4-205ENST00000579211 RIOK1Q9BRS2 568 aaKnown RBP21.1■□□□□ 0.97
ITGB4-205ENST00000579211 TCRBV5S4A2TA0A5A2 114 aa21.09■□□□□ 0.97
ITGB4-205ENST00000579211 IGF2BP3O00425 579 aaKnown RBP eCLIP21.09■□□□□ 0.97
ITGB4-205ENST00000579211 UBE3CQ15386 1083 aa21.09■□□□□ 0.97
ITGB4-205ENST00000579211 OTUD7AQ8TE49 926 aaPredicted RBP21.09■□□□□ 0.97
ITGB4-205ENST00000579211 DDRGK1Q96HY6 314 aa21.09■□□□□ 0.97
ITGB4-205ENST00000579211 MS4A4AQ96JQ5 239 aa21.09■□□□□ 0.97
ITGB4-205ENST00000579211 ARMT1Q9H993 441 aa21.09■□□□□ 0.97
ITGB4-205ENST00000579211 ZHX2Q9Y6X8 837 aa21.09■□□□□ 0.97
ITGB4-205ENST00000579211 TESPA1A2RU30 521 aaPredicted RBP21.08■□□□□ 0.97
ITGB4-205ENST00000579211 MBD4O95243 580 aa21.08■□□□□ 0.97
ITGB4-205ENST00000579211 LCORLQ8N3X6 602 aa21.08■□□□□ 0.97
ITGB4-205ENST00000579211 KBTBD3Q8NAB2 608 aa21.08■□□□□ 0.97
ITGB4-205ENST00000579211 LNPKQ9C0E8 428 aa21.08■□□□□ 0.97
ITGB4-205ENST00000579211 IGHDP01880 384 aa21.07■□□□□ 0.96
ITGB4-205ENST00000579211 PTPRAP18433 802 aa21.07■□□□□ 0.96
ITGB4-205ENST00000579211 SLFNL1Q499Z3 407 aa21.07■□□□□ 0.96
ITGB4-205ENST00000579211 AMOTL1Q8IY63 956 aa21.07■□□□□ 0.96
ITGB4-205ENST00000579211 BRI3BPQ8WY22 251 aa21.07■□□□□ 0.96
ITGB4-205ENST00000579211 PTPN18Q99952 460 aa21.07■□□□□ 0.96
ITGB4-205ENST00000579211 MCM9Q9NXL9 1143 aa21.07■□□□□ 0.96
ITGB4-205ENST00000579211 GPR25O00155 361 aa21.06■□□□□ 0.96
ITGB4-205ENST00000579211 TAF1CQ15572 869 aaPredicted RBP21.06■□□□□ 0.96
ITGB4-205ENST00000579211 SDR42E1Q8WUS8 393 aa21.06■□□□□ 0.96
ITGB4-205ENST00000579211 FSD1Q9BTV5 496 aa21.06■□□□□ 0.96
ITGB4-205ENST00000579211 ZFYVE28Q9HCC9 887 aa21.06■□□□□ 0.96
ITGB4-205ENST00000579211 CXCL11O14625 94 aa21.05■□□□□ 0.96
ITGB4-205ENST00000579211 RNF113AO15541 343 aaKnown RBP21.05■□□□□ 0.96
ITGB4-205ENST00000579211 ZFYP08048 801 aaPredicted RBP21.05■□□□□ 0.96
ITGB4-205ENST00000579211 CAP2P40123 477 aa21.05■□□□□ 0.96
ITGB4-205ENST00000579211 SMC5Q8IY18 1101 aa21.05■□□□□ 0.96
ITGB4-205ENST00000579211 PI4K2BQ8TCG2 481 aa21.05■□□□□ 0.96
ITGB4-205ENST00000579211 SERPINB13Q9UIV8 391 aa21.05■□□□□ 0.96
ITGB4-205ENST00000579211 SLC4A4Q9Y6R1 1079 aa21.05■□□□□ 0.96
ITGB4-205ENST00000579211 FKTNO75072 461 aa21.04■□□□□ 0.96
ITGB4-205ENST00000579211 CRHR2Q13324 411 aa21.04■□□□□ 0.96
ITGB4-205ENST00000579211 DGKZQ13574 1117 aa21.04■□□□□ 0.96
ITGB4-205ENST00000579211 GADL1Q6ZQY3 521 aa21.04■□□□□ 0.96
ITGB4-205ENST00000579211 ZNF296Q8WUU4 475 aaPredicted RBP21.04■□□□□ 0.96
ITGB4-205ENST00000579211 CFHR5Q9BXR6 569 aa21.04■□□□□ 0.96
ITGB4-205ENST00000579211 AS3MTQ9HBK9 375 aa21.04■□□□□ 0.96
ITGB4-205ENST00000579211 ATP8A2Q9NTI2 1148 aa21.04■□□□□ 0.96
ITGB4-205ENST00000579211 KCNH4Q9UQ05 1017 aa21.04■□□□□ 0.96
ITGB4-205ENST00000579211 DDX60LQ5H9U9 1706 aaKnown RBP21.04■□□□□ 0.96
ITGB4-205ENST00000579211 TRIM75PA6NK02 468 aa21.03■□□□□ 0.96
ITGB4-205ENST00000579211 USP17L5A8MUK1 530 aa21.03■□□□□ 0.96
ITGB4-205ENST00000579211 CHGBP05060 677 aa21.03■□□□□ 0.96
ITGB4-205ENST00000579211 PDE1AP54750 535 aa21.03■□□□□ 0.96
ITGB4-205ENST00000579211 FASTKD5Q7L8L6 764 aaKnown RBP21.03■□□□□ 0.96
ITGB4-205ENST00000579211 CHD1LQ86WJ1 897 aa21.03■□□□□ 0.96
ITGB4-205ENST00000579211 FAM43AQ8N2R8 423 aa21.03■□□□□ 0.96
ITGB4-205ENST00000579211 TBC1D2Q9BYX2 928 aa21.03■□□□□ 0.96
ITGB4-205ENST00000579211 PUS7LQ9H0K6 701 aaKnown RBP21.03■□□□□ 0.96
ITGB4-205ENST00000579211 AFG3L2Q9Y4W6 797 aa21.03■□□□□ 0.96
ITGB4-205ENST00000579211 BTBD19C9JJ37 291 aa21.02■□□□□ 0.96
ITGB4-205ENST00000579211 PRKAB2O43741 272 aa21.02■□□□□ 0.96
ITGB4-205ENST00000579211 GDF11O95390 407 aa21.02■□□□□ 0.96
ITGB4-205ENST00000579211 ASNSP08243 561 aa21.02■□□□□ 0.96
ITGB4-205ENST00000579211 APPBP2Q92624 585 aa21.02■□□□□ 0.96
ITGB4-205ENST00000579211 EHD4Q9H223 541 aa21.02■□□□□ 0.96
ITGB4-205ENST00000579211 R3HDMLQ9H3Y0 253 aa21.02■□□□□ 0.96
ITGB4-205ENST00000579211 DCP1AQ9NPI6 582 aaPredicted RBP21.02■□□□□ 0.96
ITGB4-205ENST00000579211 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.02■□□□□ 0.96
ITGB4-205ENST00000579211 TRIM6-TRIM34B2RNG4 842 aa21.01■□□□□ 0.95
ITGB4-205ENST00000579211 PLCD1P51178 756 aa21.01■□□□□ 0.95
ITGB4-205ENST00000579211 NUCB1Q02818 461 aa21.01■□□□□ 0.95
ITGB4-205ENST00000579211 NOM1Q5C9Z4 860 aaKnown RBP21.01■□□□□ 0.95
ITGB4-205ENST00000579211 ANKRD23Q86SG2 305 aa21.01■□□□□ 0.95
ITGB4-205ENST00000579211 CCDC84Q86UT8 332 aaPredicted RBP21.01■□□□□ 0.95
ITGB4-205ENST00000579211 METTL16Q86W50 562 aaKnown RBP21.01■□□□□ 0.95
ITGB4-205ENST00000579211 ZCCHC17Q9NP64 241 aaKnown RBP21.01■□□□□ 0.95
ITGB4-205ENST00000579211 STAP2Q9UGK3 403 aa21.01■□□□□ 0.95
ITGB4-205ENST00000579211 PDHXO00330 501 aa21■□□□□ 0.95
ITGB4-205ENST00000579211 SPP2Q13103 211 aa21■□□□□ 0.95
ITGB4-205ENST00000579211 CERKLQ49MI3 558 aaPredicted RBP21■□□□□ 0.95
ITGB4-205ENST00000579211 ZNF280CQ8ND82 737 aa21■□□□□ 0.95
ITGB4-205ENST00000579211 EVI5LQ96CN4 794 aa21■□□□□ 0.95
ITGB4-205ENST00000579211 CABP5Q9NP86 173 aa21■□□□□ 0.95
ITGB4-205ENST00000579211 GINM1Q9NU53 330 aa21■□□□□ 0.95
ITGB4-205ENST00000579211 SALL3Q9BXA9 1300 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms