RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 ITPRIPQ8IWB1 547 aa10.99□□□□□ -0.65
GGA3-207ENST00000578896 OSBPL5Q9H0X9 879 aaPredicted RBP10.99□□□□□ -0.65
GGA3-207ENST00000578896 BIN2Q9UBW5 565 aaPredicted RBP10.99□□□□□ -0.65
GGA3-207ENST00000578896 NDUFB9Q9Y6M9 179 aa10.99□□□□□ -0.65
GGA3-207ENST00000578896 ATAD5Q96QE3 1844 aa10.98□□□□□ -0.65
GGA3-207ENST00000578896 GNRH1P01148 92 aa10.98□□□□□ -0.65
GGA3-207ENST00000578896 CYP2E1P05181 493 aaPredicted RBP10.98□□□□□ -0.65
GGA3-207ENST00000578896 ELNP15502 786 aa10.98□□□□□ -0.65
GGA3-207ENST00000578896 HOXD10P28358 340 aa10.98□□□□□ -0.65
GGA3-207ENST00000578896 ZAP70P43403 619 aa10.98□□□□□ -0.65
GGA3-207ENST00000578896 PRMT2P55345 433 aa10.98□□□□□ -0.65
GGA3-207ENST00000578896 FCGRTP55899 365 aa10.98□□□□□ -0.65
GGA3-207ENST00000578896 DYNLL1P63167 89 aaKnown RBP10.98□□□□□ -0.65
GGA3-207ENST00000578896 JAG1P78504 1218 aa10.98□□□□□ -0.65
GGA3-207ENST00000578896 NAA16Q6N069 864 aaPredicted RBP10.98□□□□□ -0.65
GGA3-207ENST00000578896 SSH3Q8TE77 659 aa10.98□□□□□ -0.65
GGA3-207ENST00000578896 SHISA4Q96DD7 197 aa10.98□□□□□ -0.65
GGA3-207ENST00000578896 PIH1D3Q9NQM4 214 aaKnown RBP10.98□□□□□ -0.65
GGA3-207ENST00000578896 TAOK2Q9UL54 1235 aa10.98□□□□□ -0.65
GGA3-207ENST00000578896 CDK5RAP2Q96SN8 1893 aa10.98□□□□□ -0.65
GGA3-207ENST00000578896 ZBTB7BO15156 539 aaPredicted RBP10.97□□□□□ -0.65
GGA3-207ENST00000578896 TBC1D12O60347 775 aa10.97□□□□□ -0.65
GGA3-207ENST00000578896 PEX10O60683 326 aa10.97□□□□□ -0.65
GGA3-207ENST00000578896 CCL5P13501 91 aa10.97□□□□□ -0.65
GGA3-207ENST00000578896 HMGCS2P54868 508 aa10.97□□□□□ -0.65
GGA3-207ENST00000578896 HABP4Q5JVS0 413 aaKnown RBP10.97□□□□□ -0.65
GGA3-207ENST00000578896 CCDC158Q5M9N0 1113 aa10.97□□□□□ -0.65
GGA3-207ENST00000578896 FTSJ3Q8IY81 847 aaKnown RBP10.97□□□□□ -0.65
GGA3-207ENST00000578896 ANKRD13CQ8N6S4 541 aa10.97□□□□□ -0.65
GGA3-207ENST00000578896 SMCR8Q8TEV9 937 aaPredicted RBP10.97□□□□□ -0.65
GGA3-207ENST00000578896 TGFBRAP1Q8WUH2 860 aa10.97□□□□□ -0.65
GGA3-207ENST00000578896 RNF208Q9H0X6 261 aa10.97□□□□□ -0.65
GGA3-207ENST00000578896 UNC93B1Q9H1C4 597 aa10.97□□□□□ -0.65
GGA3-207ENST00000578896 SAP30BPQ9UHR5 308 aaKnown RBP10.97□□□□□ -0.65
GGA3-207ENST00000578896 DBNLQ9UJU6 430 aaKnown RBP10.97□□□□□ -0.65
GGA3-207ENST00000578896 SIPA1L1O43166 1804 aa10.97□□□□□ -0.65
GGA3-207ENST00000578896 NPM3O75607 178 aaKnown RBP10.96□□□□□ -0.65
GGA3-207ENST00000578896 GDF11O95390 407 aa10.96□□□□□ -0.65
GGA3-207ENST00000578896 CAP2P40123 477 aa10.96□□□□□ -0.65
GGA3-207ENST00000578896 FLT3LGP49771 235 aa10.96□□□□□ -0.65
GGA3-207ENST00000578896 PANK1Q8TE04 598 aa10.96□□□□□ -0.65
GGA3-207ENST00000578896 EAF2Q96CJ1 260 aaPredicted RBP10.96□□□□□ -0.65
GGA3-207ENST00000578896 NOL10Q9BSC4 688 aaKnown RBP10.96□□□□□ -0.65
GGA3-207ENST00000578896 BCL11AQ9H165 835 aa10.96□□□□□ -0.65
GGA3-207ENST00000578896 GPR108Q9NPR9 543 aa10.96□□□□□ -0.65
GGA3-207ENST00000578896 PALD1Q9ULE6 856 aa10.96□□□□□ -0.65
GGA3-207ENST00000578896 AGTPBP1Q9UPW5 1226 aa10.96□□□□□ -0.65
GGA3-207ENST00000578896 RANBP2P49792 3224 aaKnown RBP10.96□□□□□ -0.66
GGA3-207ENST00000578896 H0YGN5 161 aa10.95□□□□□ -0.66
GGA3-207ENST00000578896 TNPO2O14787 897 aaKnown RBP10.95□□□□□ -0.66
GGA3-207ENST00000578896 ADCY3O60266 1144 aa10.95□□□□□ -0.66
GGA3-207ENST00000578896 CYP7A1P22680 504 aa10.95□□□□□ -0.66
GGA3-207ENST00000578896 MIGA1Q8NAN2 632 aa10.95□□□□□ -0.66
GGA3-207ENST00000578896 ZNF280CQ8ND82 737 aa10.95□□□□□ -0.66
GGA3-207ENST00000578896 ANTXR1Q9H6X2 564 aa10.95□□□□□ -0.66
GGA3-207ENST00000578896 DNAJC18Q9H819 358 aa10.95□□□□□ -0.66
GGA3-207ENST00000578896 COLQQ9Y215 455 aaPredicted RBP10.95□□□□□ -0.66
GGA3-207ENST00000578896 EXOC6BQ9Y2D4 811 aa10.95□□□□□ -0.66
GGA3-207ENST00000578896 SZT2Q5T011 3432 aa10.95□□□□□ -0.66
GGA3-207ENST00000578896 FLT1P17948 1338 aa10.94□□□□□ -0.66
GGA3-207ENST00000578896 USP17L5A8MUK1 530 aa10.94□□□□□ -0.66
GGA3-207ENST00000578896 APBB1O00213 710 aa10.94□□□□□ -0.66
GGA3-207ENST00000578896 IDH1O75874 414 aaKnown RBP10.94□□□□□ -0.66
GGA3-207ENST00000578896 BAG3O95817 575 aa10.94□□□□□ -0.66
GGA3-207ENST00000578896 INHAP05111 366 aa10.94□□□□□ -0.66
GGA3-207ENST00000578896 GJB1P08034 283 aa10.94□□□□□ -0.66
GGA3-207ENST00000578896 PPP4CP60510 307 aa10.94□□□□□ -0.66
GGA3-207ENST00000578896 UBXN2AP68543 259 aa10.94□□□□□ -0.66
GGA3-207ENST00000578896 DIEXFQ68CQ4 756 aaKnown RBP10.94□□□□□ -0.66
GGA3-207ENST00000578896 CEP85Q6P2H3 762 aa10.94□□□□□ -0.66
GGA3-207ENST00000578896 DPF3Q92784 378 aa10.94□□□□□ -0.66
GGA3-207ENST00000578896 GCC1Q96CN9 775 aa10.94□□□□□ -0.66
GGA3-207ENST00000578896 PI4KBQ9UBF8 816 aa10.94□□□□□ -0.66
GGA3-207ENST00000578896 SLC45A1Q9Y2W3 748 aa10.94□□□□□ -0.66
GGA3-207ENST00000578896 NOP58Q9Y2X3 529 aaKnown RBP10.94□□□□□ -0.66
GGA3-207ENST00000578896 MYH1P12882 1939 aa10.94□□□□□ -0.66
GGA3-207ENST00000578896 MAP4K4O95819 1239 aaPredicted RBP10.93□□□□□ -0.66
GGA3-207ENST00000578896 GJA8P48165 433 aa10.93□□□□□ -0.66
GGA3-207ENST00000578896 MTMR2Q13614 643 aa10.93□□□□□ -0.66
GGA3-207ENST00000578896 MAGEB6Q8N7X4 407 aa10.93□□□□□ -0.66
GGA3-207ENST00000578896 SLAIN1Q8ND83 568 aa10.93□□□□□ -0.66
GGA3-207ENST00000578896 ASCC2Q9H1I8 757 aaPredicted RBP10.93□□□□□ -0.66
GGA3-207ENST00000578896 IL1RAPL2Q9NP60 686 aa10.93□□□□□ -0.66
GGA3-207ENST00000578896 TRIM32Q13049 653 aa10.92□□□□□ -0.66
GGA3-207ENST00000578896 AACSQ86V21 672 aa10.92□□□□□ -0.66
GGA3-207ENST00000578896 CRACR2BQ8N4Y2 399 aaPredicted RBP10.92□□□□□ -0.66
GGA3-207ENST00000578896 PROCA1Q8NCQ7 364 aaPredicted RBP10.92□□□□□ -0.66
GGA3-207ENST00000578896 U2AF1L4Q8WU68 220 aaKnown RBP10.92□□□□□ -0.66
GGA3-207ENST00000578896 DEFB118Q96PH6 123 aa10.92□□□□□ -0.66
GGA3-207ENST00000578896 P2RX7Q99572 595 aaKnown RBP10.92□□□□□ -0.66
GGA3-207ENST00000578896 TRIM34Q9BYJ4 488 aa10.92□□□□□ -0.66
GGA3-207ENST00000578896 HERC5Q9UII4 1024 aaKnown RBP10.92□□□□□ -0.66
GGA3-207ENST00000578896 PNMA3Q9UL41 463 aa10.92□□□□□ -0.66
GGA3-207ENST00000578896 FOCADQ5VW36 1801 aa10.92□□□□□ -0.66
GGA3-207ENST00000578896 LOC285556D6RIA3 1793 aa10.92□□□□□ -0.66
GGA3-207ENST00000578896 MAST2Q6P0Q8 1798 aa10.92□□□□□ -0.66
GGA3-207ENST00000578896 COL2A1P02458 1487 aaPredicted RBP10.92□□□□□ -0.66
GGA3-207ENST00000578896 SGPL1O95470 568 aa10.91□□□□□ -0.66
GGA3-207ENST00000578896 TFRCP02786 760 aaKnown RBP10.91□□□□□ -0.66
GGA3-207ENST00000578896 PLCG2P16885 1265 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms