RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 TRIM60Q495X7 471 aa14.11□□□□□ -0.15
GGA3-206ENST00000578773 USP6NLQ92738 828 aa14.11□□□□□ -0.15
GGA3-206ENST00000578773 RNPC3Q96LT9 517 aaKnown RBP14.11□□□□□ -0.15
GGA3-206ENST00000578773 C1QTNF1Q9BXJ1 281 aa14.11□□□□□ -0.15
GGA3-206ENST00000578773 ASCC2Q9H1I8 757 aaPredicted RBP14.11□□□□□ -0.15
GGA3-206ENST00000578773 PRDM12Q9H4Q4 367 aa14.11□□□□□ -0.15
GGA3-206ENST00000578773 ZNF576Q9H609 170 aa14.11□□□□□ -0.15
GGA3-206ENST00000578773 PRKAG2Q9UGJ0 569 aa14.11□□□□□ -0.15
GGA3-206ENST00000578773 HCN4Q9Y3Q4 1203 aa14.11□□□□□ -0.15
GGA3-206ENST00000578773 PBX2P40425 430 aa14.1□□□□□ -0.15
GGA3-206ENST00000578773 TFF2Q03403 129 aa14.1□□□□□ -0.15
GGA3-206ENST00000578773 CCDC30Q5VVM6 783 aa14.1□□□□□ -0.15
GGA3-206ENST00000578773 HHIPL2Q6UWX4 724 aa14.1□□□□□ -0.15
GGA3-206ENST00000578773 SMCHD1A6NHR9 2005 aa14.1□□□□□ -0.15
GGA3-206ENST00000578773 RFX7Q2KHR2 1363 aa14.09□□□□□ -0.15
GGA3-206ENST00000578773 DDTLA6NHG4 134 aaPredicted RBP14.09□□□□□ -0.15
GGA3-206ENST00000578773 KCNQ1P51787 676 aa14.09□□□□□ -0.15
GGA3-206ENST00000578773 HMGCS2P54868 508 aa14.09□□□□□ -0.15
GGA3-206ENST00000578773 GJC2Q5T442 439 aaPredicted RBP14.09□□□□□ -0.15
GGA3-206ENST00000578773 TRPV1Q8NER1 839 aa14.09□□□□□ -0.15
GGA3-206ENST00000578773 TBC1D22AQ8WUA7 517 aa14.09□□□□□ -0.15
GGA3-206ENST00000578773 PORCNQ9H237 461 aa14.09□□□□□ -0.15
GGA3-206ENST00000578773 SPINK5Q9NQ38 1064 aaPredicted RBP14.09□□□□□ -0.15
GGA3-206ENST00000578773 MORF4L1Q9UBU8 362 aa14.09□□□□□ -0.15
GGA3-206ENST00000578773 ARIH1Q9Y4X5 557 aaPredicted RBP14.09□□□□□ -0.15
GGA3-206ENST00000578773 CDK5RAP2Q96SN8 1893 aa14.09□□□□□ -0.15
GGA3-206ENST00000578773 CACNA1AO00555 2505 aa14.08□□□□□ -0.15
GGA3-206ENST00000578773 GRXCR1A8MXD5 290 aa14.08□□□□□ -0.16
GGA3-206ENST00000578773 BMP1P13497 986 aa14.08□□□□□ -0.16
GGA3-206ENST00000578773 GCLCP48506 637 aaPredicted RBP14.08□□□□□ -0.16
GGA3-206ENST00000578773 RGS3P49796 1198 aa14.08□□□□□ -0.16
GGA3-206ENST00000578773 RRP1BQ14684 758 aaKnown RBP14.08□□□□□ -0.16
GGA3-206ENST00000578773 TAF7LQ5H9L4 462 aa14.08□□□□□ -0.16
GGA3-206ENST00000578773 NUDT12Q9BQG2 462 aa14.08□□□□□ -0.16
GGA3-206ENST00000578773 MRIQ9BWK5 157 aa14.08□□□□□ -0.16
GGA3-206ENST00000578773 PNMA3Q9UL41 463 aa14.08□□□□□ -0.16
GGA3-206ENST00000578773 FRAT2O75474 233 aaPredicted RBP14.07□□□□□ -0.16
GGA3-206ENST00000578773 XRCC5P13010 732 aaKnown RBP14.07□□□□□ -0.16
GGA3-206ENST00000578773 SPP2Q13103 211 aa14.07□□□□□ -0.16
GGA3-206ENST00000578773 Q3C1V9 767 aa14.07□□□□□ -0.16
GGA3-206ENST00000578773 ANO1Q5XXA6 986 aa14.07□□□□□ -0.16
GGA3-206ENST00000578773 SLC39A5Q6ZMH5 540 aa14.07□□□□□ -0.16
GGA3-206ENST00000578773 RUNDC1Q96C34 613 aa14.07□□□□□ -0.16
GGA3-206ENST00000578773 TIFAQ96CG3 184 aa14.07□□□□□ -0.16
GGA3-206ENST00000578773 DDX4Q9NQI0 724 aaKnown RBP14.07□□□□□ -0.16
GGA3-206ENST00000578773 USP40Q9NVE5 1235 aa14.07□□□□□ -0.16
GGA3-206ENST00000578773 NDUFB9Q9Y6M9 179 aa14.07□□□□□ -0.16
GGA3-206ENST00000578773 PRDX5P30044 214 aa14.06□□□□□ -0.16
GGA3-206ENST00000578773 CCDC57Q2TAC2 916 aa14.06□□□□□ -0.16
GGA3-206ENST00000578773 LRRC24Q50LG9 513 aa14.06□□□□□ -0.16
GGA3-206ENST00000578773 MORN1Q5T089 497 aa14.06□□□□□ -0.16
GGA3-206ENST00000578773 VPS37DQ86XT2 251 aa14.06□□□□□ -0.16
GGA3-206ENST00000578773 PROCA1Q8NCQ7 364 aaPredicted RBP14.06□□□□□ -0.16
GGA3-206ENST00000578773 P2RX7Q99572 595 aaKnown RBP14.06□□□□□ -0.16
GGA3-206ENST00000578773 IFT57Q9NWB7 429 aa14.06□□□□□ -0.16
GGA3-206ENST00000578773 DDX20Q9UHI6 824 aaKnown RBP14.06□□□□□ -0.16
GGA3-206ENST00000578773 LRRFIP2Q9Y608 721 aaKnown RBP14.06□□□□□ -0.16
GGA3-206ENST00000578773 MAST3O60307 1309 aa14.06□□□□□ -0.16
GGA3-206ENST00000578773 DNM1LO00429 736 aa14.05□□□□□ -0.16
GGA3-206ENST00000578773 MRE11P49959 708 aa14.05□□□□□ -0.16
GGA3-206ENST00000578773 AKNAD1Q5T1N1 836 aa14.05□□□□□ -0.16
GGA3-206ENST00000578773 LINS1Q8NG48 757 aa14.05□□□□□ -0.16
GGA3-206ENST00000578773 SOCS4Q8WXH5 440 aa14.05□□□□□ -0.16
GGA3-206ENST00000578773 DNAAF4Q8WXU2 420 aa14.05□□□□□ -0.16
GGA3-206ENST00000578773 TSR2Q969E8 191 aaKnown RBP14.05□□□□□ -0.16
GGA3-206ENST00000578773 GAS2L1Q99501 681 aaPredicted RBP14.05□□□□□ -0.16
GGA3-206ENST00000578773 MYH16Q9H6N6 1097 aa14.05□□□□□ -0.16
GGA3-206ENST00000578773 CTNND1O60716 968 aaKnown RBP14.04□□□□□ -0.16
GGA3-206ENST00000578773 CNGA1P29973 690 aa14.04□□□□□ -0.16
GGA3-206ENST00000578773 MAP3K10Q02779 954 aa14.04□□□□□ -0.16
GGA3-206ENST00000578773 SNX17Q15036 470 aa14.04□□□□□ -0.16
GGA3-206ENST00000578773 TMEM31Q5JXX7 168 aa14.04□□□□□ -0.16
GGA3-206ENST00000578773 GPR142Q7Z601 462 aa14.04□□□□□ -0.16
GGA3-206ENST00000578773 VGLL2Q8N8G2 317 aa14.04□□□□□ -0.16
GGA3-206ENST00000578773 FERMT2Q96AC1 680 aa14.04□□□□□ -0.16
GGA3-206ENST00000578773 APBA2Q99767 749 aa14.04□□□□□ -0.16
GGA3-206ENST00000578773 PRRC2BQ5JSZ5 2229 aaKnown RBP14.04□□□□□ -0.16
GGA3-206ENST00000578773 F6X3S4 739 aa14.03□□□□□ -0.16
GGA3-206ENST00000578773 SLC4A2P04920 1241 aa14.03□□□□□ -0.16
GGA3-206ENST00000578773 IGFBP4P22692 258 aa14.03□□□□□ -0.16
GGA3-206ENST00000578773 FLIIQ13045 1269 aa14.03□□□□□ -0.16
GGA3-206ENST00000578773 SHROOM1Q2M3G4 852 aaPredicted RBP14.03□□□□□ -0.16
GGA3-206ENST00000578773 IL27Q8NEV9 243 aa14.03□□□□□ -0.16
GGA3-206ENST00000578773 LPAR1Q92633 364 aa14.03□□□□□ -0.16
GGA3-206ENST00000578773 PBX4Q9BYU1 374 aa14.03□□□□□ -0.16
GGA3-206ENST00000578773 RBPJLQ9UBG7 517 aa14.03□□□□□ -0.16
GGA3-206ENST00000578773 ZNFX1Q9P2E3 1918 aaKnown RBP14.03□□□□□ -0.16
GGA3-206ENST00000578773 CYP2C19P33261 490 aa14.02□□□□□ -0.17
GGA3-206ENST00000578773 RGS2P41220 211 aa14.02□□□□□ -0.17
GGA3-206ENST00000578773 GNAI1P63096 354 aa14.02□□□□□ -0.17
GGA3-206ENST00000578773 TLE2Q04725 743 aa14.02□□□□□ -0.17
GGA3-206ENST00000578773 ZSCAN29Q8IWY8 852 aaPredicted RBP14.02□□□□□ -0.17
GGA3-206ENST00000578773 KAZALD1Q96I82 304 aa14.02□□□□□ -0.17
GGA3-206ENST00000578773 USP34Q70CQ2 3546 aa14.02□□□□□ -0.17
GGA3-206ENST00000578773 CFAP54Q96N23 3096 aa14.01□□□□□ -0.17
GGA3-206ENST00000578773 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.01□□□□□ -0.17
GGA3-206ENST00000578773 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.01□□□□□ -0.17
GGA3-206ENST00000578773 MYCNP04198 464 aaPredicted RBP14.01□□□□□ -0.17
GGA3-206ENST00000578773 ADCYAP1R1P41586 468 aa14.01□□□□□ -0.17
GGA3-206ENST00000578773 HERVK_113P62684 666 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms