RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 TBC1D9Q6ZT07 1266 aa10.36□□□□□ -0.75
PPP4R1-210ENST00000578557 METTL16Q86W50 562 aaKnown RBP10.36□□□□□ -0.75
PPP4R1-210ENST00000578557 ZSCAN29Q8IWY8 852 aaPredicted RBP10.36□□□□□ -0.75
PPP4R1-210ENST00000578557 TEX11Q8IYF3 940 aa10.36□□□□□ -0.75
PPP4R1-210ENST00000578557 CSRNP1Q96S65 589 aa10.36□□□□□ -0.75
PPP4R1-210ENST00000578557 CRNKL1Q9BZJ0 848 aaKnown RBP10.36□□□□□ -0.75
PPP4R1-210ENST00000578557 TMEM39BQ9GZU3 492 aa10.36□□□□□ -0.75
PPP4R1-210ENST00000578557 SNRKQ9NRH2 765 aa10.36□□□□□ -0.75
PPP4R1-210ENST00000578557 FAM198AQ9UFP1 575 aa10.36□□□□□ -0.75
PPP4R1-210ENST00000578557 STAP2Q9UGK3 403 aa10.36□□□□□ -0.75
PPP4R1-210ENST00000578557 ATRNL1Q5VV63 1379 aa10.36□□□□□ -0.75
PPP4R1-210ENST00000578557 COL2A1P02458 1487 aaPredicted RBP10.36□□□□□ -0.75
PPP4R1-210ENST00000578557 AOX1Q06278 1338 aa10.35□□□□□ -0.75
PPP4R1-210ENST00000578557 APBB1O00213 710 aa10.35□□□□□ -0.75
PPP4R1-210ENST00000578557 CXCL11O14625 94 aa10.35□□□□□ -0.75
PPP4R1-210ENST00000578557 RGS3P49796 1198 aa10.35□□□□□ -0.75
PPP4R1-210ENST00000578557 NT5C2P49902 561 aa10.35□□□□□ -0.75
PPP4R1-210ENST00000578557 KIF23Q02241 960 aaPredicted RBP10.35□□□□□ -0.75
PPP4R1-210ENST00000578557 FMR1Q06787 632 aaKnown RBP eCLIP10.35□□□□□ -0.75
PPP4R1-210ENST00000578557 RASAL3Q86YV0 1011 aa10.35□□□□□ -0.75
PPP4R1-210ENST00000578557 KBTBD3Q8NAB2 608 aa10.35□□□□□ -0.75
PPP4R1-210ENST00000578557 TRIM34Q9BYJ4 488 aa10.35□□□□□ -0.75
PPP4R1-210ENST00000578557 EHD4Q9H223 541 aa10.35□□□□□ -0.75
PPP4R1-210ENST00000578557 BOLA2Q9H3K6 86 aa10.35□□□□□ -0.75
PPP4R1-210ENST00000578557 ZNF287Q9HBT7 754 aa10.35□□□□□ -0.75
PPP4R1-210ENST00000578557 MAGEB6P1A0A0J9YX57 407 aa10.34□□□□□ -0.75
PPP4R1-210ENST00000578557 SPDYE5A6NIY4 337 aa10.34□□□□□ -0.75
PPP4R1-210ENST00000578557 GOLIM4O00461 696 aa10.34□□□□□ -0.75
PPP4R1-210ENST00000578557 HSPA1AP0DMV8 641 aaKnown RBP10.34□□□□□ -0.75
PPP4R1-210ENST00000578557 HSPA1BP0DMV9 641 aaKnown RBP10.34□□□□□ -0.75
PPP4R1-210ENST00000578557 CETPP11597 493 aa10.34□□□□□ -0.75
PPP4R1-210ENST00000578557 MX1P20591 662 aa10.34□□□□□ -0.75
PPP4R1-210ENST00000578557 USP5P45974 858 aa10.34□□□□□ -0.75
PPP4R1-210ENST00000578557 SNAPC2Q13487 334 aa10.34□□□□□ -0.75
PPP4R1-210ENST00000578557 PRAMEF18Q5VWM3 479 aa10.34□□□□□ -0.75
PPP4R1-210ENST00000578557 ERICH6BQ5W0A0 696 aa10.34□□□□□ -0.75
PPP4R1-210ENST00000578557 PI16Q6UXB8 463 aa10.34□□□□□ -0.75
PPP4R1-210ENST00000578557 MAGEB6Q8N7X4 407 aa10.34□□□□□ -0.75
PPP4R1-210ENST00000578557 TMC2Q8TDI7 906 aa10.34□□□□□ -0.75
PPP4R1-210ENST00000578557 EVI5LQ96CN4 794 aa10.34□□□□□ -0.75
PPP4R1-210ENST00000578557 WRNIP1Q96S55 665 aa10.34□□□□□ -0.75
PPP4R1-210ENST00000578557 DNAJC2Q99543 621 aaKnown RBP10.34□□□□□ -0.75
PPP4R1-210ENST00000578557 OSBPL3Q9H4L5 887 aa10.34□□□□□ -0.75
PPP4R1-210ENST00000578557 PICK1Q9NRD5 415 aa10.34□□□□□ -0.75
PPP4R1-210ENST00000578557 TLR7Q9NYK1 1049 aaKnown RBP10.34□□□□□ -0.75
PPP4R1-210ENST00000578557 PCDHAC2Q9Y5I4 1007 aa10.34□□□□□ -0.75
PPP4R1-210ENST00000578557 HIP1O00291 1037 aa10.33□□□□□ -0.76
PPP4R1-210ENST00000578557 PDE6AP16499 860 aa10.33□□□□□ -0.76
PPP4R1-210ENST00000578557 ADD2P35612 726 aa10.33□□□□□ -0.76
PPP4R1-210ENST00000578557 MFAP1P55081 439 aaKnown RBP10.33□□□□□ -0.76
PPP4R1-210ENST00000578557 TCP10Q12799 353 aa10.33□□□□□ -0.76
PPP4R1-210ENST00000578557 PPIL2Q13356 520 aa10.33□□□□□ -0.76
PPP4R1-210ENST00000578557 PKN2Q16513 984 aaKnown RBP10.33□□□□□ -0.76
PPP4R1-210ENST00000578557 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.33□□□□□ -0.76
PPP4R1-210ENST00000578557 FASTKD5Q7L8L6 764 aaKnown RBP10.33□□□□□ -0.76
PPP4R1-210ENST00000578557 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.33□□□□□ -0.76
PPP4R1-210ENST00000578557 AS3MTQ9HBK9 375 aa10.33□□□□□ -0.76
PPP4R1-210ENST00000578557 PIH1D3Q9NQM4 214 aaKnown RBP10.33□□□□□ -0.76
PPP4R1-210ENST00000578557 AATFQ9NY61 560 aaKnown RBP eCLIP10.33□□□□□ -0.76
PPP4R1-210ENST00000578557 SLC45A1Q9Y2W3 748 aa10.33□□□□□ -0.76
PPP4R1-210ENST00000578557 SCN9AQ15858 1988 aa10.32□□□□□ -0.76
PPP4R1-210ENST00000578557 C2orf72A6NCS6 295 aa10.32□□□□□ -0.76
PPP4R1-210ENST00000578557 ASNSP08243 561 aa10.32□□□□□ -0.76
PPP4R1-210ENST00000578557 NUCB1Q02818 461 aa10.32□□□□□ -0.76
PPP4R1-210ENST00000578557 NFIAQ12857 509 aa10.32□□□□□ -0.76
PPP4R1-210ENST00000578557 PABPC4Q13310 644 aaKnown RBP eCLIP10.32□□□□□ -0.76
PPP4R1-210ENST00000578557 PPP4R3BQ5MIZ7 849 aa10.32□□□□□ -0.76
PPP4R1-210ENST00000578557 CHD1LQ86WJ1 897 aa10.32□□□□□ -0.76
PPP4R1-210ENST00000578557 SCYL3Q8IZE3 742 aa10.32□□□□□ -0.76
PPP4R1-210ENST00000578557 CRACR2BQ8N4Y2 399 aaPredicted RBP10.32□□□□□ -0.76
PPP4R1-210ENST00000578557 ZNF384Q8TF68 577 aa10.32□□□□□ -0.76
PPP4R1-210ENST00000578557 TGFBRAP1Q8WUH2 860 aa10.32□□□□□ -0.76
PPP4R1-210ENST00000578557 WNK4Q96J92 1243 aa10.32□□□□□ -0.76
PPP4R1-210ENST00000578557 NACAP1Q9BZK3 213 aa10.32□□□□□ -0.76
PPP4R1-210ENST00000578557 GPHNQ9NQX3 736 aaPredicted RBP10.32□□□□□ -0.76
PPP4R1-210ENST00000578557 SWAP70Q9UH65 585 aa10.32□□□□□ -0.76
PPP4R1-210ENST00000578557 PAPPA2Q9BXP8 1791 aa10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 PSME4Q14997 1843 aa10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 PHF20L1A8MW92 1017 aa10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 C19orf81C9J6K1 198 aa10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 RNF113AO15541 343 aaKnown RBP10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 CENPBP07199 599 aaPredicted RBP10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 PDE4AP27815 886 aa10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 CACNB3P54284 484 aa10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 GRM1Q13255 1194 aa10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 PICALMQ13492 652 aa10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 PRKG1Q13976 671 aa10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 VGLL4Q14135 290 aa10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 EXOC6Q8TAG9 804 aa10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 SH3RF3Q8TEJ3 882 aaPredicted RBP10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 APPBP2Q92624 585 aa10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 OPTNQ96CV9 577 aa10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 CCDC17Q96LX7 622 aa10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 RIOK1Q9BRS2 568 aaKnown RBP10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 CRISPLD2Q9H0B8 497 aa10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 ANTXR1Q9H6X2 564 aa10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 CABP5Q9NP86 173 aa10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 RNF186Q9NXI6 227 aa10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 SERPINB13Q9UIV8 391 aa10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 KCNH4Q9UQ05 1017 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms