RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 RBM27Q9P2N5 1060 aaKnown RBP12.93□□□□□ -0.34
SKA2-204ENST00000578519 RCOR1Q9UKL0 485 aa12.93□□□□□ -0.34
SKA2-204ENST00000578519 A0A1B0GUL6 1792 aa12.93□□□□□ -0.34
SKA2-204ENST00000578519 LAMA4Q16363 1823 aa12.92□□□□□ -0.34
SKA2-204ENST00000578519 WTIPA6NIX2 430 aaPredicted RBP12.92□□□□□ -0.34
SKA2-204ENST00000578519 GADD45BO75293 160 aaPredicted RBP12.92□□□□□ -0.34
SKA2-204ENST00000578519 DEXIO95424 95 aa12.92□□□□□ -0.34
SKA2-204ENST00000578519 FMNL1O95466 1100 aaPredicted RBP12.92□□□□□ -0.34
SKA2-204ENST00000578519 POLR3DP05423 398 aaPredicted RBP12.92□□□□□ -0.34
SKA2-204ENST00000578519 XRCC6P12956 609 aaKnown RBP eCLIP12.92□□□□□ -0.34
SKA2-204ENST00000578519 NASPP49321 788 aaPredicted RBP12.92□□□□□ -0.34
SKA2-204ENST00000578519 SF3A1Q15459 793 aaKnown RBP12.92□□□□□ -0.34
SKA2-204ENST00000578519 SLC15A2Q16348 729 aa12.92□□□□□ -0.34
SKA2-204ENST00000578519 UVSSAQ2YD98 709 aa12.92□□□□□ -0.34
SKA2-204ENST00000578519 MFSD14BQ5SR56 506 aa12.92□□□□□ -0.34
SKA2-204ENST00000578519 C2CD5Q86YS7 1000 aa12.92□□□□□ -0.34
SKA2-204ENST00000578519 ZNF654Q8IZM8 581 aa12.92□□□□□ -0.34
SKA2-204ENST00000578519 ZNF444Q8N0Y2 327 aaPredicted RBP12.92□□□□□ -0.34
SKA2-204ENST00000578519 FANCBQ8NB91 859 aa12.92□□□□□ -0.34
SKA2-204ENST00000578519 BICD2Q8TD16 824 aa12.92□□□□□ -0.34
SKA2-204ENST00000578519 KCNG4Q8TDN1 519 aa12.92□□□□□ -0.34
SKA2-204ENST00000578519 ZNF622Q969S3 477 aaKnown RBP eCLIP12.92□□□□□ -0.34
SKA2-204ENST00000578519 GPHNQ9NQX3 736 aaPredicted RBP12.92□□□□□ -0.34
SKA2-204ENST00000578519 TFIP11Q9UBB9 837 aaKnown RBP12.92□□□□□ -0.34
SKA2-204ENST00000578519 POLLQ9UGP5 575 aa12.92□□□□□ -0.34
SKA2-204ENST00000578519 TNRC6CQ9HCJ0 1690 aaKnown RBP12.92□□□□□ -0.34
SKA2-204ENST00000578519 TNKSO95271 1327 aa12.91□□□□□ -0.34
SKA2-204ENST00000578519 GPR75-ASB3A0A0A6YYF3 556 aa12.91□□□□□ -0.34
SKA2-204ENST00000578519 SYCE3A1L190 88 aa12.91□□□□□ -0.34
SKA2-204ENST00000578519 TSPY2A6NKD2 308 aa12.91□□□□□ -0.34
SKA2-204ENST00000578519 CTAGE5O15320 804 aa12.91□□□□□ -0.34
SKA2-204ENST00000578519 YEATS4O95619 227 aa12.91□□□□□ -0.34
SKA2-204ENST00000578519 FDPSP14324 419 aaKnown RBP12.91□□□□□ -0.34
SKA2-204ENST00000578519 KIF5BP33176 963 aa12.91□□□□□ -0.34
SKA2-204ENST00000578519 ADD1P35611 737 aaKnown RBP12.91□□□□□ -0.34
SKA2-204ENST00000578519 GNAQP50148 359 aa12.91□□□□□ -0.34
SKA2-204ENST00000578519 PPP4R3BQ5MIZ7 849 aa12.91□□□□□ -0.34
SKA2-204ENST00000578519 CCDC73Q6ZRK6 1079 aa12.91□□□□□ -0.34
SKA2-204ENST00000578519 PODNQ7Z5L7 613 aa12.91□□□□□ -0.34
SKA2-204ENST00000578519 TTC6Q86TZ1 520 aa12.91□□□□□ -0.34
SKA2-204ENST00000578519 CTCFLQ8NI51 663 aaPredicted RBP12.91□□□□□ -0.34
SKA2-204ENST00000578519 MAP3K14Q99558 947 aa12.91□□□□□ -0.34
SKA2-204ENST00000578519 SLC26A6Q9BXS9 759 aa12.91□□□□□ -0.34
SKA2-204ENST00000578519 BRMS1Q9HCU9 246 aa12.91□□□□□ -0.34
SKA2-204ENST00000578519 RTEL1Q9NZ71 1219 aa12.91□□□□□ -0.34
SKA2-204ENST00000578519 TAOK2Q9UL54 1235 aa12.91□□□□□ -0.34
SKA2-204ENST00000578519 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.91□□□□□ -0.34
SKA2-204ENST00000578519 RGPD3A6NKT7 1758 aaPredicted RBP12.9□□□□□ -0.34
SKA2-204ENST00000578519 MAST2Q6P0Q8 1798 aa12.9□□□□□ -0.34
SKA2-204ENST00000578519 RGPD4Q7Z3J3 1758 aa12.9□□□□□ -0.34
SKA2-204ENST00000578519 FKBP1AP62942 108 aaKnown RBP12.9□□□□□ -0.34
SKA2-204ENST00000578519 CCDC173Q0VFZ6 552 aa12.9□□□□□ -0.34
SKA2-204ENST00000578519 STK38Q15208 465 aa12.9□□□□□ -0.34
SKA2-204ENST00000578519 SEC23AQ15436 765 aa12.9□□□□□ -0.34
SKA2-204ENST00000578519 C12orf60Q5U649 245 aa12.9□□□□□ -0.34
SKA2-204ENST00000578519 DGKHQ86XP1 1220 aa12.9□□□□□ -0.34
SKA2-204ENST00000578519 TEX11Q8IYF3 940 aa12.9□□□□□ -0.34
SKA2-204ENST00000578519 NUP133Q8WUM0 1156 aa12.9□□□□□ -0.34
SKA2-204ENST00000578519 RNF26Q9BY78 433 aaPredicted RBP12.9□□□□□ -0.34
SKA2-204ENST00000578519 NUP62CLQ9H1M0 184 aa12.9□□□□□ -0.34
SKA2-204ENST00000578519 TCP11L1Q9NUJ3 509 aa12.9□□□□□ -0.34
SKA2-204ENST00000578519 COL4A1P02462 1669 aa12.89□□□□□ -0.35
SKA2-204ENST00000578519 CASZ1Q86V15 1759 aa12.89□□□□□ -0.35
SKA2-204ENST00000578519 CAVIN2O95810 425 aa12.89□□□□□ -0.35
SKA2-204ENST00000578519 CCDC192P0DO97 292 aa12.89□□□□□ -0.35
SKA2-204ENST00000578519 BTDP43251 543 aa12.89□□□□□ -0.35
SKA2-204ENST00000578519 GTF2IP78347 998 aa12.89□□□□□ -0.35
SKA2-204ENST00000578519 CRACR2BQ8N4Y2 399 aaPredicted RBP12.89□□□□□ -0.35
SKA2-204ENST00000578519 ZNF384Q8TF68 577 aa12.89□□□□□ -0.35
SKA2-204ENST00000578519 SLC16A10Q8TF71 515 aa12.89□□□□□ -0.35
SKA2-204ENST00000578519 TRIM44Q96DX7 344 aaPredicted RBP12.89□□□□□ -0.35
SKA2-204ENST00000578519 CHAMP1Q96JM3 812 aa12.89□□□□□ -0.35
SKA2-204ENST00000578519 CAMKK2Q96RR4 588 aa12.89□□□□□ -0.35
SKA2-204ENST00000578519 MRIQ9BWK5 157 aa12.89□□□□□ -0.35
SKA2-204ENST00000578519 KAT14Q9H8E8 782 aa12.89□□□□□ -0.35
SKA2-204ENST00000578519 POLR3EQ9NVU0 708 aa12.89□□□□□ -0.35
SKA2-204ENST00000578519 CACNA1SQ13698 1873 aa12.89□□□□□ -0.35
SKA2-204ENST00000578519 RIMBP2O15034 1052 aa12.88□□□□□ -0.35
SKA2-204ENST00000578519 PRPF3O43395 683 aaKnown RBP12.88□□□□□ -0.35
SKA2-204ENST00000578519 CDC27P30260 824 aa12.88□□□□□ -0.35
SKA2-204ENST00000578519 ME1P48163 572 aa12.88□□□□□ -0.35
SKA2-204ENST00000578519 FOSBP53539 338 aa12.88□□□□□ -0.35
SKA2-204ENST00000578519 GUCY1B3Q02153 619 aa12.88□□□□□ -0.35
SKA2-204ENST00000578519 NTRK3Q16288 839 aa12.88□□□□□ -0.35
SKA2-204ENST00000578519 MAP3K11Q16584 847 aa12.88□□□□□ -0.35
SKA2-204ENST00000578519 KRT40Q6A162 431 aa12.88□□□□□ -0.35
SKA2-204ENST00000578519 GAS2L3Q86XJ1 694 aa12.88□□□□□ -0.35
SKA2-204ENST00000578519 FAM177A1Q8N128 213 aaPredicted RBP12.88□□□□□ -0.35
SKA2-204ENST00000578519 STK11IPQ8N1F8 1099 aa12.88□□□□□ -0.35
SKA2-204ENST00000578519 SH3RF3Q8TEJ3 882 aaPredicted RBP12.88□□□□□ -0.35
SKA2-204ENST00000578519 FBXO41Q8TF61 875 aa12.88□□□□□ -0.35
SKA2-204ENST00000578519 TGFBRAP1Q8WUH2 860 aa12.88□□□□□ -0.35
SKA2-204ENST00000578519 ANKS1AQ92625 1134 aa12.88□□□□□ -0.35
SKA2-204ENST00000578519 FBXW7Q969H0 707 aa12.88□□□□□ -0.35
SKA2-204ENST00000578519 LZTS2Q9BRK4 669 aa12.88□□□□□ -0.35
SKA2-204ENST00000578519 ZKSCAN3Q9BRR0 538 aa12.88□□□□□ -0.35
SKA2-204ENST00000578519 RTFDC1Q9BY42 306 aaPredicted RBP12.88□□□□□ -0.35
SKA2-204ENST00000578519 INCENPQ9NQS7 918 aa12.88□□□□□ -0.35
SKA2-204ENST00000578519 CEP131Q9UPN4 1083 aa12.88□□□□□ -0.35
SKA2-204ENST00000578519 TAF1P21675 1872 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms