RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 COL2A1P02458 1487 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC8-204ENST00000578252 SHTN1A0MZ66 631 aa13.38□□□□□ -0.27
TRAPPC8-204ENST00000578252 VEGFAP15692 232 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC8-204ENST00000578252 RBM26Q5T8P6 1007 aaKnown RBP13.38□□□□□ -0.27
TRAPPC8-204ENST00000578252 CCDC129Q6ZRS4 1044 aa13.38□□□□□ -0.27
TRAPPC8-204ENST00000578252 SAMD7Q7Z3H4 446 aa13.38□□□□□ -0.27
TRAPPC8-204ENST00000578252 ZNF589Q86UQ0 364 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC8-204ENST00000578252 SH3RF3Q8TEJ3 882 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC8-204ENST00000578252 DSCC1Q9BVC3 393 aa13.38□□□□□ -0.27
TRAPPC8-204ENST00000578252 IDI2Q9BXS1 227 aa13.38□□□□□ -0.27
TRAPPC8-204ENST00000578252 TAF1DQ9H5J8 278 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC8-204ENST00000578252 SLC4A4Q9Y6R1 1079 aa13.38□□□□□ -0.27
TRAPPC8-204ENST00000578252 DDX60LQ5H9U9 1706 aaKnown RBP13.38□□□□□ -0.27
TRAPPC8-204ENST00000578252 PITPNM2Q9BZ72 1349 aa13.38□□□□□ -0.27
TRAPPC8-204ENST00000578252 MYH1P12882 1939 aa13.37□□□□□ -0.27
TRAPPC8-204ENST00000578252 PATL2C9JE40 543 aaKnown RBP13.37□□□□□ -0.27
TRAPPC8-204ENST00000578252 USP5P45974 858 aa13.37□□□□□ -0.27
TRAPPC8-204ENST00000578252 TNNI2P48788 182 aa13.37□□□□□ -0.27
TRAPPC8-204ENST00000578252 TNFAIP1Q13829 316 aa13.37□□□□□ -0.27
TRAPPC8-204ENST00000578252 NBPF9Q3BBW0 867 aa13.37□□□□□ -0.27
TRAPPC8-204ENST00000578252 APOBEC3FQ8IUX4 373 aaKnown RBP13.37□□□□□ -0.27
TRAPPC8-204ENST00000578252 TRPM4Q8TD43 1214 aa13.37□□□□□ -0.27
TRAPPC8-204ENST00000578252 ZC3H15Q8WU90 426 aaKnown RBP13.37□□□□□ -0.27
TRAPPC8-204ENST00000578252 TDRD3Q9H7E2 651 aaKnown RBP13.37□□□□□ -0.27
TRAPPC8-204ENST00000578252 ANO2Q9NQ90 1003 aa13.37□□□□□ -0.27
TRAPPC8-204ENST00000578252 ZNF70Q9UC06 446 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC8-204ENST00000578252 LAMB1P07942 1786 aa13.37□□□□□ -0.27
TRAPPC8-204ENST00000578252 LAMA4Q16363 1823 aa13.36□□□□□ -0.27
TRAPPC8-204ENST00000578252 ENTPD3O75355 529 aa13.36□□□□□ -0.27
TRAPPC8-204ENST00000578252 WDHD1O75717 1129 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC8-204ENST00000578252 APPP05067 770 aa13.36□□□□□ -0.27
TRAPPC8-204ENST00000578252 HSPD1P10809 573 aaKnown RBP13.36□□□□□ -0.27
TRAPPC8-204ENST00000578252 ALX1Q15699 326 aa13.36□□□□□ -0.27
TRAPPC8-204ENST00000578252 FAM83AQ86UY5 434 aa13.36□□□□□ -0.27
TRAPPC8-204ENST00000578252 SPNS2Q8IVW8 549 aa13.36□□□□□ -0.27
TRAPPC8-204ENST00000578252 AMOTL1Q8IY63 956 aa13.36□□□□□ -0.27
TRAPPC8-204ENST00000578252 PTCD2Q8WV60 388 aaKnown RBP13.36□□□□□ -0.27
TRAPPC8-204ENST00000578252 IL25Q9H293 177 aa13.36□□□□□ -0.27
TRAPPC8-204ENST00000578252 CTNNA3Q9UI47 895 aa13.36□□□□□ -0.27
TRAPPC8-204ENST00000578252 PCDHAC2Q9Y5I4 1007 aa13.36□□□□□ -0.27
TRAPPC8-204ENST00000578252 FLT1P17948 1338 aa13.36□□□□□ -0.27
TRAPPC8-204ENST00000578252 BAZ2AQ9UIF9 1905 aaKnown RBP13.35□□□□□ -0.27
TRAPPC8-204ENST00000578252 CLRN2A0PK11 232 aa13.35□□□□□ -0.27
TRAPPC8-204ENST00000578252 GSG1L2A8MUP6 293 aa13.35□□□□□ -0.27
TRAPPC8-204ENST00000578252 POTECB2RU33 542 aa13.35□□□□□ -0.27
TRAPPC8-204ENST00000578252 EGFRP00533 1210 aa13.35□□□□□ -0.27
TRAPPC8-204ENST00000578252 TDO2P48775 406 aa13.35□□□□□ -0.27
TRAPPC8-204ENST00000578252 IFNL3Q8IZI9 196 aa13.35□□□□□ -0.27
TRAPPC8-204ENST00000578252 ZNF687Q8N1G0 1237 aa13.35□□□□□ -0.27
TRAPPC8-204ENST00000578252 TGFBRAP1Q8WUH2 860 aa13.35□□□□□ -0.27
TRAPPC8-204ENST00000578252 SDR42E1Q8WUS8 393 aa13.35□□□□□ -0.27
TRAPPC8-204ENST00000578252 LSG1Q9H089 658 aaKnown RBP13.35□□□□□ -0.27
TRAPPC8-204ENST00000578252 NAPBQ9H115 298 aa13.35□□□□□ -0.27
TRAPPC8-204ENST00000578252 UPF2Q9HAU5 1272 aaKnown RBP13.35□□□□□ -0.27
TRAPPC8-204ENST00000578252 VEZTQ9HBM0 779 aa13.35□□□□□ -0.27
TRAPPC8-204ENST00000578252 DCP1AQ9NPI6 582 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC8-204ENST00000578252 ARPP21Q9UBL0 812 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC8-204ENST00000578252 PPP2R3BQ9Y5P8 575 aa13.35□□□□□ -0.27
TRAPPC8-204ENST00000578252 PRKAB2O43741 272 aa13.34□□□□□ -0.27
TRAPPC8-204ENST00000578252 HIRAP54198 1017 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC8-204ENST00000578252 PICALMQ13492 652 aa13.34□□□□□ -0.27
TRAPPC8-204ENST00000578252 PPP1R15BQ5SWA1 713 aa13.34□□□□□ -0.27
TRAPPC8-204ENST00000578252 ANGEL2Q5VTE6 544 aaKnown RBP13.34□□□□□ -0.27
TRAPPC8-204ENST00000578252 MAPKAPK5Q8IW41 473 aa13.34□□□□□ -0.27
TRAPPC8-204ENST00000578252 FAM151AQ8WW52 585 aa13.34□□□□□ -0.27
TRAPPC8-204ENST00000578252 MAP4K1Q92918 833 aa13.34□□□□□ -0.27
TRAPPC8-204ENST00000578252 BACH2Q9BYV9 841 aa13.34□□□□□ -0.27
TRAPPC8-204ENST00000578252 OSBPL5Q9H0X9 879 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC8-204ENST00000578252 DHX36Q9H2U1 1008 aaKnown RBP13.34□□□□□ -0.27
TRAPPC8-204ENST00000578252 RRAGCQ9HB90 399 aa13.34□□□□□ -0.27
TRAPPC8-204ENST00000578252 GGA3Q9NZ52 723 aa13.34□□□□□ -0.27
TRAPPC8-204ENST00000578252 MKRN1Q9UHC7 482 aaKnown RBP13.34□□□□□ -0.27
TRAPPC8-204ENST00000578252 FOXP2O15409 715 aa13.33□□□□□ -0.28
TRAPPC8-204ENST00000578252 HLA-DOAP06340 250 aa13.33□□□□□ -0.28
TRAPPC8-204ENST00000578252 MCCP23508 829 aa13.33□□□□□ -0.28
TRAPPC8-204ENST00000578252 NFIAQ12857 509 aa13.33□□□□□ -0.28
TRAPPC8-204ENST00000578252 SBK1Q52WX2 424 aa13.33□□□□□ -0.28
TRAPPC8-204ENST00000578252 EAPPQ56P03 285 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC8-204ENST00000578252 VPS53Q5VIR6 699 aa13.33□□□□□ -0.28
TRAPPC8-204ENST00000578252 DCPSQ96C86 337 aaKnown RBP13.33□□□□□ -0.28
TRAPPC8-204ENST00000578252 EPB41L4AQ9HCS5 686 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC8-204ENST00000578252 FAM198AQ9UFP1 575 aa13.33□□□□□ -0.28
TRAPPC8-204ENST00000578252 PGAP2Q9UHJ9 254 aa13.33□□□□□ -0.28
TRAPPC8-204ENST00000578252 LHX6Q9UPM6 363 aa13.33□□□□□ -0.28
TRAPPC8-204ENST00000578252 ATRNL1Q5VV63 1379 aa13.32□□□□□ -0.28
TRAPPC8-204ENST00000578252 TCP10L2B9ZVM9 353 aa13.32□□□□□ -0.28
TRAPPC8-204ENST00000578252 FGAP02671 866 aa13.32□□□□□ -0.28
TRAPPC8-204ENST00000578252 CACNB3P54284 484 aa13.32□□□□□ -0.28
TRAPPC8-204ENST00000578252 PTH1RQ03431 593 aa13.32□□□□□ -0.28
TRAPPC8-204ENST00000578252 IMMTQ16891 758 aaKnown RBP13.32□□□□□ -0.28
TRAPPC8-204ENST00000578252 RNF20Q5VTR2 975 aa13.32□□□□□ -0.28
TRAPPC8-204ENST00000578252 TTC6Q86TZ1 520 aa13.32□□□□□ -0.28
TRAPPC8-204ENST00000578252 LDHDQ86WU2 507 aa13.32□□□□□ -0.28
TRAPPC8-204ENST00000578252 SULF1Q8IWU6 871 aa13.32□□□□□ -0.28
TRAPPC8-204ENST00000578252 HOOK2Q96ED9 719 aa13.32□□□□□ -0.28
TRAPPC8-204ENST00000578252 GPBP1L1Q9HC44 474 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC8-204ENST00000578252 NMRK2Q9NPI5 230 aa13.32□□□□□ -0.28
TRAPPC8-204ENST00000578252 DDX4Q9NQI0 724 aaKnown RBP13.32□□□□□ -0.28
TRAPPC8-204ENST00000578252 MCM9Q9NXL9 1143 aa13.32□□□□□ -0.28
TRAPPC8-204ENST00000578252 RBM8AQ9Y5S9 174 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms