RNA–Protein interactions for RNA: ENST00000577913.1

BRIP1-203, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-203ENST00000577913 MCCP23508 829 aa6.32□□□□□ -1.4
BRIP1-203ENST00000577913 PRDX5P30044 214 aa6.32□□□□□ -1.4
BRIP1-203ENST00000577913 RFC5P40937 340 aa6.32□□□□□ -1.4
BRIP1-203ENST00000577913 SCNN1DP51172 638 aa6.32□□□□□ -1.4
BRIP1-203ENST00000577913 IRF5Q13568 498 aa6.32□□□□□ -1.4
BRIP1-203ENST00000577913 QPCTQ16769 361 aa6.32□□□□□ -1.4
BRIP1-203ENST00000577913 SLC4A8Q2Y0W8 1093 aa6.32□□□□□ -1.4
BRIP1-203ENST00000577913 MFSD14BQ5SR56 506 aa6.32□□□□□ -1.4
BRIP1-203ENST00000577913 FOXD4L5Q5VV16 416 aaPredicted RBP6.32□□□□□ -1.4
BRIP1-203ENST00000577913 STK11IPQ8N1F8 1099 aa6.32□□□□□ -1.4
BRIP1-203ENST00000577913 WDR66Q8TBY9 1149 aa6.32□□□□□ -1.4
BRIP1-203ENST00000577913 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.32□□□□□ -1.4
BRIP1-203ENST00000577913 FOXD4L4Q8WXT5 416 aaPredicted RBP6.32□□□□□ -1.4
BRIP1-203ENST00000577913 AIDAQ96BJ3 306 aa6.32□□□□□ -1.4
BRIP1-203ENST00000577913 SYT17Q9BSW7 474 aa6.32□□□□□ -1.4
BRIP1-203ENST00000577913 ARMT1Q9H993 441 aa6.32□□□□□ -1.4
BRIP1-203ENST00000577913 GJA3Q9Y6H8 435 aa6.32□□□□□ -1.4
BRIP1-203ENST00000577913 COL11A2P13942 1736 aaPredicted RBP6.32□□□□□ -1.4
BRIP1-203ENST00000577913 MED23Q9ULK4 1368 aa6.31□□□□□ -1.4
BRIP1-203ENST00000577913 NRXN2Q9P2S2 1712 aa6.31□□□□□ -1.4
BRIP1-203ENST00000577913 MAGEB6P1A0A0J9YX57 407 aa6.31□□□□□ -1.4
BRIP1-203ENST00000577913 USP17L3A6NCW0 530 aa6.31□□□□□ -1.4
BRIP1-203ENST00000577913 USP17L4A6NCW7 530 aa6.31□□□□□ -1.4
BRIP1-203ENST00000577913 EIF5BO60841 1220 aaKnown RBP6.31□□□□□ -1.4
BRIP1-203ENST00000577913 MBD4O95243 580 aa6.31□□□□□ -1.4
BRIP1-203ENST00000577913 IARSP41252 1262 aaKnown RBP6.31□□□□□ -1.4
BRIP1-203ENST00000577913 EIF6P56537 245 aaKnown RBP6.31□□□□□ -1.4
BRIP1-203ENST00000577913 DYNLL1P63167 89 aaKnown RBP6.31□□□□□ -1.4
BRIP1-203ENST00000577913 GSTO1P78417 241 aa6.31□□□□□ -1.4
BRIP1-203ENST00000577913 MECOMQ03112 1051 aa6.31□□□□□ -1.4
BRIP1-203ENST00000577913 MCMDC2Q4G0Z9 681 aa6.31□□□□□ -1.4
BRIP1-203ENST00000577913 PRPF38BQ5VTL8 546 aaKnown RBP6.31□□□□□ -1.4
BRIP1-203ENST00000577913 PPP2R2DQ66LE6 453 aa6.31□□□□□ -1.4
BRIP1-203ENST00000577913 USP17L1Q7RTZ2 530 aa6.31□□□□□ -1.4
BRIP1-203ENST00000577913 KIAA0825Q8IV33 1275 aa6.31□□□□□ -1.4
BRIP1-203ENST00000577913 ZGPATQ8N5A5 531 aaKnown RBP6.31□□□□□ -1.4
BRIP1-203ENST00000577913 TDRD7Q8NHU6 1098 aaKnown RBP6.31□□□□□ -1.4
BRIP1-203ENST00000577913 C7orf43Q8WVR3 580 aa6.31□□□□□ -1.4
BRIP1-203ENST00000577913 APPBP2Q92624 585 aa6.31□□□□□ -1.4
BRIP1-203ENST00000577913 KCTD12Q96CX2 325 aaKnown RBP6.31□□□□□ -1.4
BRIP1-203ENST00000577913 ZNF512BQ96KM6 892 aaPredicted RBP6.31□□□□□ -1.4
BRIP1-203ENST00000577913 C22orf23Q9BZE7 217 aa6.31□□□□□ -1.4
BRIP1-203ENST00000577913 SGSM2O43147 1006 aa6.3□□□□□ -1.4
BRIP1-203ENST00000577913 LILRB3O75022 631 aa6.3□□□□□ -1.4
BRIP1-203ENST00000577913 ZFYP08048 801 aaPredicted RBP6.3□□□□□ -1.4
BRIP1-203ENST00000577913 IL1R1P14778 569 aa6.3□□□□□ -1.4
BRIP1-203ENST00000577913 ADD2P35612 726 aa6.3□□□□□ -1.4
BRIP1-203ENST00000577913 ANP32AP39687 249 aaKnown RBP6.3□□□□□ -1.4
BRIP1-203ENST00000577913 USP5P45974 858 aa6.3□□□□□ -1.4
BRIP1-203ENST00000577913 APLP1P51693 650 aa6.3□□□□□ -1.4
BRIP1-203ENST00000577913 PTH1RQ03431 593 aa6.3□□□□□ -1.4
BRIP1-203ENST00000577913 PDE4CQ08493 712 aa6.3□□□□□ -1.4
BRIP1-203ENST00000577913 KIAA2012Q0VF49 1180 aa6.3□□□□□ -1.4
BRIP1-203ENST00000577913 GRIK5Q16478 980 aa6.3□□□□□ -1.4
BRIP1-203ENST00000577913 ZMYM1Q5SVZ6 1142 aa6.3□□□□□ -1.4
BRIP1-203ENST00000577913 THSD4Q6ZMP0 1018 aa6.3□□□□□ -1.4
BRIP1-203ENST00000577913 C15orf52Q6ZUT6 534 aaKnown RBP6.3□□□□□ -1.4
BRIP1-203ENST00000577913 ZNF589Q86UQ0 364 aaPredicted RBP6.3□□□□□ -1.4
BRIP1-203ENST00000577913 TBC1D22AQ8WUA7 517 aa6.3□□□□□ -1.4
BRIP1-203ENST00000577913 OSBP2Q969R2 916 aa6.3□□□□□ -1.4
BRIP1-203ENST00000577913 CALR3Q96L12 384 aaKnown RBP6.3□□□□□ -1.4
BRIP1-203ENST00000577913 PSMD1Q99460 953 aa6.3□□□□□ -1.4
BRIP1-203ENST00000577913 PUS7LQ9H0K6 701 aaKnown RBP6.3□□□□□ -1.4
BRIP1-203ENST00000577913 HELLSQ9NRZ9 838 aa6.3□□□□□ -1.4
BRIP1-203ENST00000577913 TOMM22Q9NS69 142 aa6.3□□□□□ -1.4
BRIP1-203ENST00000577913 AATFQ9NY61 560 aaKnown RBP eCLIP6.3□□□□□ -1.4
BRIP1-203ENST00000577913 RNF181Q9P0P0 153 aa6.3□□□□□ -1.4
BRIP1-203ENST00000577913 PCDHGC3Q9UN70 934 aa6.3□□□□□ -1.4
BRIP1-203ENST00000577913 TTF2Q9UNY4 1162 aaKnown RBP6.3□□□□□ -1.4
BRIP1-203ENST00000577913 SLC4A4Q9Y6R1 1079 aa6.3□□□□□ -1.4
BRIP1-203ENST00000577913 CACNA1SQ13698 1873 aa6.3□□□□□ -1.4
BRIP1-203ENST00000577913 SLX4Q8IY92 1834 aa6.29□□□□□ -1.4
BRIP1-203ENST00000577913 MAST3O60307 1309 aa6.29□□□□□ -1.4
BRIP1-203ENST00000577913 CCDC171Q6TFL3 1326 aa6.29□□□□□ -1.4
BRIP1-203ENST00000577913 COL1A1P02452 1464 aaPredicted RBP6.29□□□□□ -1.4
BRIP1-203ENST00000577913 NFKBIEO00221 500 aa6.29□□□□□ -1.4
BRIP1-203ENST00000577913 PSMD14O00487 310 aa6.29□□□□□ -1.4
BRIP1-203ENST00000577913 GPAA1O43292 621 aa6.29□□□□□ -1.4
BRIP1-203ENST00000577913 PRKAB2O43741 272 aa6.29□□□□□ -1.4
BRIP1-203ENST00000577913 BAG3O95817 575 aa6.29□□□□□ -1.4
BRIP1-203ENST00000577913 LDHCP07864 332 aa6.29□□□□□ -1.4
BRIP1-203ENST00000577913 YBX3P16989 372 aaKnown RBP eCLIP6.29□□□□□ -1.4
BRIP1-203ENST00000577913 TDO2P48775 406 aa6.29□□□□□ -1.4
BRIP1-203ENST00000577913 HAND2P61296 217 aa6.29□□□□□ -1.4
BRIP1-203ENST00000577913 PICALMQ13492 652 aa6.29□□□□□ -1.4
BRIP1-203ENST00000577913 MTMR2Q13614 643 aa6.29□□□□□ -1.4
BRIP1-203ENST00000577913 TNIP1Q15025 636 aa6.29□□□□□ -1.4
BRIP1-203ENST00000577913 PUS10Q3MIT2 529 aaKnown RBP6.29□□□□□ -1.4
BRIP1-203ENST00000577913 VPS53Q5VIR6 699 aa6.29□□□□□ -1.4
BRIP1-203ENST00000577913 NOL8Q76FK4 1167 aaKnown RBP6.29□□□□□ -1.4
BRIP1-203ENST00000577913 PODNQ7Z5L7 613 aa6.29□□□□□ -1.4
BRIP1-203ENST00000577913 LCORLQ8N3X6 602 aa6.29□□□□□ -1.4
BRIP1-203ENST00000577913 RTFDC1Q9BY42 306 aaPredicted RBP6.29□□□□□ -1.4
BRIP1-203ENST00000577913 IL25Q9H293 177 aa6.29□□□□□ -1.4
BRIP1-203ENST00000577913 WBP1LQ9NX94 342 aa6.29□□□□□ -1.4
BRIP1-203ENST00000577913 SAP30BPQ9UHR5 308 aaKnown RBP6.29□□□□□ -1.4
BRIP1-203ENST00000577913 ZNRF3Q9ULT6 936 aa6.29□□□□□ -1.4
BRIP1-203ENST00000577913 RBM19Q9Y4C8 960 aaKnown RBP6.29□□□□□ -1.4
BRIP1-203ENST00000577913 RBM8AQ9Y5S9 174 aaKnown RBP6.29□□□□□ -1.4
BRIP1-203ENST00000577913 IRS2Q9Y4H2 1338 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms