RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 PLCG2P16885 1265 aa13.35□□□□□ -0.27
CDK5RAP3-204ENST00000577664 CAP1Q01518 475 aa13.35□□□□□ -0.27
CDK5RAP3-204ENST00000577664 DIXDC1Q155Q3 683 aa13.35□□□□□ -0.27
CDK5RAP3-204ENST00000577664 ALX1Q15699 326 aa13.35□□□□□ -0.27
CDK5RAP3-204ENST00000577664 SLC4A8Q2Y0W8 1093 aa13.35□□□□□ -0.27
CDK5RAP3-204ENST00000577664 ANGEL2Q5VTE6 544 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-204ENST00000577664 FKBP1CQ5VVH2 108 aa13.35□□□□□ -0.27
CDK5RAP3-204ENST00000577664 UBE2Q1Q7Z7E8 422 aa13.35□□□□□ -0.27
CDK5RAP3-204ENST00000577664 IFNL1Q8IU54 200 aa13.35□□□□□ -0.27
CDK5RAP3-204ENST00000577664 DEFB123Q8N688 67 aa13.35□□□□□ -0.27
CDK5RAP3-204ENST00000577664 DPF3Q92784 378 aa13.35□□□□□ -0.27
CDK5RAP3-204ENST00000577664 SEC62Q99442 399 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-204ENST00000577664 IL25Q9H293 177 aa13.35□□□□□ -0.27
CDK5RAP3-204ENST00000577664 MUC3AQ02505 3323 aa13.34□□□□□ -0.27
CDK5RAP3-204ENST00000577664 MAGEB6P1A0A0J9YX57 407 aa13.34□□□□□ -0.27
CDK5RAP3-204ENST00000577664 SPDYE2BA6NHP3 402 aa13.34□□□□□ -0.27
CDK5RAP3-204ENST00000577664 PATL2C9JE40 543 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP3-204ENST00000577664 M0R2C6 588 aa13.34□□□□□ -0.27
CDK5RAP3-204ENST00000577664 GPAA1O43292 621 aa13.34□□□□□ -0.27
CDK5RAP3-204ENST00000577664 SPDYE6P0CI01 402 aa13.34□□□□□ -0.27
CDK5RAP3-204ENST00000577664 CFAP100Q494V2 611 aa13.34□□□□□ -0.27
CDK5RAP3-204ENST00000577664 SLC9C1Q4G0N8 1177 aa13.34□□□□□ -0.27
CDK5RAP3-204ENST00000577664 SPRYD7Q5W111 196 aa13.34□□□□□ -0.27
CDK5RAP3-204ENST00000577664 ZNF589Q86UQ0 364 aaPredicted RBP13.34□□□□□ -0.27
CDK5RAP3-204ENST00000577664 MAP4K1Q92918 833 aa13.34□□□□□ -0.27
CDK5RAP3-204ENST00000577664 PRMT6Q96LA8 375 aaPredicted RBP13.34□□□□□ -0.27
CDK5RAP3-204ENST00000577664 DSCC1Q9BVC3 393 aa13.34□□□□□ -0.27
CDK5RAP3-204ENST00000577664 IDI2Q9BXS1 227 aa13.34□□□□□ -0.27
CDK5RAP3-204ENST00000577664 MYOZ2Q9NPC6 264 aa13.34□□□□□ -0.27
CDK5RAP3-204ENST00000577664 MTMR10Q9NXD2 777 aa13.34□□□□□ -0.27
CDK5RAP3-204ENST00000577664 CCDC171Q6TFL3 1326 aa13.34□□□□□ -0.27
CDK5RAP3-204ENST00000577664 MANSC4A6NHS7 340 aaPredicted RBP13.33□□□□□ -0.28
CDK5RAP3-204ENST00000577664 F8W031 263 aaPredicted RBP13.33□□□□□ -0.28
CDK5RAP3-204ENST00000577664 WNT10BO00744 389 aa13.33□□□□□ -0.28
CDK5RAP3-204ENST00000577664 FOXP2O15409 715 aa13.33□□□□□ -0.28
CDK5RAP3-204ENST00000577664 REC8O95072 547 aa13.33□□□□□ -0.28
CDK5RAP3-204ENST00000577664 HSPD1P10809 573 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-204ENST00000577664 COL9A1P20849 921 aa13.33□□□□□ -0.28
CDK5RAP3-204ENST00000577664 BTDP43251 543 aa13.33□□□□□ -0.28
CDK5RAP3-204ENST00000577664 MKRN3Q13064 507 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-204ENST00000577664 DLGAP5Q15398 846 aa13.33□□□□□ -0.28
CDK5RAP3-204ENST00000577664 SHISA4Q96DD7 197 aa13.33□□□□□ -0.28
CDK5RAP3-204ENST00000577664 LSG1Q9H089 658 aaKnown RBP13.33□□□□□ -0.28
CDK5RAP3-204ENST00000577664 ATP8A2Q9NTI2 1148 aa13.33□□□□□ -0.28
CDK5RAP3-204ENST00000577664 NR2E3Q9Y5X4 410 aa13.33□□□□□ -0.28
CDK5RAP3-204ENST00000577664 ZMYM6O95789 1325 aa13.33□□□□□ -0.28
CDK5RAP3-204ENST00000577664 GSG1L2A8MUP6 293 aa13.32□□□□□ -0.28
CDK5RAP3-204ENST00000577664 SP3Q02447 781 aa13.32□□□□□ -0.28
CDK5RAP3-204ENST00000577664 LDLRAD1Q5T700 205 aa13.32□□□□□ -0.28
CDK5RAP3-204ENST00000577664 CDC42EP5Q6NZY7 148 aa13.32□□□□□ -0.28
CDK5RAP3-204ENST00000577664 LCORLQ8N3X6 602 aa13.32□□□□□ -0.28
CDK5RAP3-204ENST00000577664 NOL10Q9BSC4 688 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-204ENST00000577664 HTATIP2Q9BUP3 242 aa13.32□□□□□ -0.28
CDK5RAP3-204ENST00000577664 USP26Q9BXU7 913 aa13.32□□□□□ -0.28
CDK5RAP3-204ENST00000577664 AATFQ9NY61 560 aaKnown RBP eCLIP13.32□□□□□ -0.28
CDK5RAP3-204ENST00000577664 TAOK2Q9UL54 1235 aa13.32□□□□□ -0.28
CDK5RAP3-204ENST00000577664 IGF2BP3O00425 579 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDK5RAP3-204ENST00000577664 WDHD1O75717 1129 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP3-204ENST00000577664 MBD4O95243 580 aa13.31□□□□□ -0.28
CDK5RAP3-204ENST00000577664 DYNLL1P63167 89 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP3-204ENST00000577664 SPDYE2Q495Y8 402 aa13.31□□□□□ -0.28
CDK5RAP3-204ENST00000577664 MIGA1Q8NAN2 632 aa13.31□□□□□ -0.28
CDK5RAP3-204ENST00000577664 KCNB2Q92953 911 aa13.31□□□□□ -0.28
CDK5RAP3-204ENST00000577664 IL17RAQ96F46 866 aa13.31□□□□□ -0.28
CDK5RAP3-204ENST00000577664 CRNKL1Q9BZJ0 848 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP3-204ENST00000577664 ARMT1Q9H993 441 aa13.31□□□□□ -0.28
CDK5RAP3-204ENST00000577664 PTCH2Q9Y6C5 1203 aa13.31□□□□□ -0.28
CDK5RAP3-204ENST00000577664 TTC28Q96AY4 2481 aa13.31□□□□□ -0.28
CDK5RAP3-204ENST00000577664 SEC24BO95487 1268 aa13.3□□□□□ -0.28
CDK5RAP3-204ENST00000577664 PLA2G5P39877 138 aa13.3□□□□□ -0.28
CDK5RAP3-204ENST00000577664 NECTIN1Q15223 517 aa13.3□□□□□ -0.28
CDK5RAP3-204ENST00000577664 TSGA10IPQ3SY00 556 aa13.3□□□□□ -0.28
CDK5RAP3-204ENST00000577664 SBK1Q52WX2 424 aa13.3□□□□□ -0.28
CDK5RAP3-204ENST00000577664 CCDC129Q6ZRS4 1044 aa13.3□□□□□ -0.28
CDK5RAP3-204ENST00000577664 KIAA1211Q6ZU35 1233 aa13.3□□□□□ -0.28
CDK5RAP3-204ENST00000577664 FAM83AQ86UY5 434 aa13.3□□□□□ -0.28
CDK5RAP3-204ENST00000577664 IFNL3Q8IZI9 196 aa13.3□□□□□ -0.28
CDK5RAP3-204ENST00000577664 SH3RF3Q8TEJ3 882 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP3-204ENST00000577664 USP40Q9NVE5 1235 aa13.3□□□□□ -0.28
CDK5RAP3-204ENST00000577664 PCDHAC2Q9Y5I4 1007 aa13.3□□□□□ -0.28
CDK5RAP3-204ENST00000577664 MYO1BO43795 1136 aa13.29□□□□□ -0.28
CDK5RAP3-204ENST00000577664 ENTPD3O75355 529 aa13.29□□□□□ -0.28
CDK5RAP3-204ENST00000577664 FGAP02671 866 aa13.29□□□□□ -0.28
CDK5RAP3-204ENST00000577664 ZBTB48P10074 688 aaPredicted RBP13.29□□□□□ -0.28
CDK5RAP3-204ENST00000577664 PTH1RQ03431 593 aa13.29□□□□□ -0.28
CDK5RAP3-204ENST00000577664 CRHR2Q13324 411 aa13.29□□□□□ -0.28
CDK5RAP3-204ENST00000577664 NBPF9Q3BBW0 867 aa13.29□□□□□ -0.28
CDK5RAP3-204ENST00000577664 VPS53Q5VIR6 699 aa13.29□□□□□ -0.28
CDK5RAP3-204ENST00000577664 Q7L0L9 218 aa13.29□□□□□ -0.28
CDK5RAP3-204ENST00000577664 TDRD3Q9H7E2 651 aaKnown RBP13.29□□□□□ -0.28
CDK5RAP3-204ENST00000577664 DCP1AQ9NPI6 582 aaPredicted RBP13.29□□□□□ -0.28
CDK5RAP3-204ENST00000577664 ZNF70Q9UC06 446 aaPredicted RBP13.29□□□□□ -0.28
CDK5RAP3-204ENST00000577664 SLC4A4Q9Y6R1 1079 aa13.29□□□□□ -0.28
CDK5RAP3-204ENST00000577664 COL2A1P02458 1487 aaPredicted RBP13.29□□□□□ -0.28
CDK5RAP3-204ENST00000577664 PRKAB2O43741 272 aa13.28□□□□□ -0.28
CDK5RAP3-204ENST00000577664 BMP8BP34820 402 aa13.28□□□□□ -0.28
CDK5RAP3-204ENST00000577664 RBM5P52756 815 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDK5RAP3-204ENST00000577664 ARHGEF6Q15052 776 aa13.28□□□□□ -0.28
CDK5RAP3-204ENST00000577664 LRIT3Q3SXY7 679 aa13.28□□□□□ -0.28
CDK5RAP3-204ENST00000577664 METTL16Q86W50 562 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms