RNA–Protein interactions for RNA: ENST00000577645.5

NUP85-206, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 869 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-206ENST00000577645 GOLIM4O00461 696 aa11.75□□□□□ -0.53
NUP85-206ENST00000577645 CTNND1O60716 968 aaKnown RBP11.75□□□□□ -0.53
NUP85-206ENST00000577645 GLRX3O76003 335 aaKnown RBP11.75□□□□□ -0.53
NUP85-206ENST00000577645 CETPP11597 493 aa11.75□□□□□ -0.53
NUP85-206ENST00000577645 LBX1P52954 281 aa11.75□□□□□ -0.53
NUP85-206ENST00000577645 NUCB1Q02818 461 aa11.75□□□□□ -0.53
NUP85-206ENST00000577645 UBE3CQ15386 1083 aa11.75□□□□□ -0.53
NUP85-206ENST00000577645 SLC9C2Q5TAH2 1124 aa11.75□□□□□ -0.53
NUP85-206ENST00000577645 METTL16Q86W50 562 aaKnown RBP11.75□□□□□ -0.53
NUP85-206ENST00000577645 SCYL3Q8IZE3 742 aa11.75□□□□□ -0.53
NUP85-206ENST00000577645 DDRGK1Q96HY6 314 aa11.75□□□□□ -0.53
NUP85-206ENST00000577645 CLMNQ96JQ2 1002 aa11.75□□□□□ -0.53
NUP85-206ENST00000577645 DNAJC2Q99543 621 aaKnown RBP11.75□□□□□ -0.53
NUP85-206ENST00000577645 TRIM34Q9BYJ4 488 aa11.75□□□□□ -0.53
NUP85-206ENST00000577645 CRNKL1Q9BZJ0 848 aaKnown RBP11.75□□□□□ -0.53
NUP85-206ENST00000577645 EHD4Q9H223 541 aa11.75□□□□□ -0.53
NUP85-206ENST00000577645 ELP3Q9H9T3 547 aa11.75□□□□□ -0.53
NUP85-206ENST00000577645 DDX4Q9NQI0 724 aaKnown RBP11.75□□□□□ -0.53
NUP85-206ENST00000577645 PICK1Q9NRD5 415 aa11.75□□□□□ -0.53
NUP85-206ENST00000577645 RNF186Q9NXI6 227 aa11.75□□□□□ -0.53
NUP85-206ENST00000577645 GTF3C3Q9Y5Q9 886 aa11.75□□□□□ -0.53
NUP85-206ENST00000577645 PDE6AP16499 860 aa11.74□□□□□ -0.53
NUP85-206ENST00000577645 ADD2P35612 726 aa11.74□□□□□ -0.53
NUP85-206ENST00000577645 IFNL1Q8IU54 200 aa11.74□□□□□ -0.53
NUP85-206ENST00000577645 CDAN1Q8IWY9 1227 aa11.74□□□□□ -0.53
NUP85-206ENST00000577645 AMOTL1Q8IY63 956 aa11.74□□□□□ -0.53
NUP85-206ENST00000577645 SPOCK2Q92563 424 aa11.74□□□□□ -0.53
NUP85-206ENST00000577645 KCNH4Q9UQ05 1017 aa11.74□□□□□ -0.53
NUP85-206ENST00000577645 MAGEB6P1A0A0J9YX57 407 aa11.73□□□□□ -0.53
NUP85-206ENST00000577645 CXCL11O14625 94 aa11.73□□□□□ -0.53
NUP85-206ENST00000577645 MGAMO43451 1857 aa11.73□□□□□ -0.53
NUP85-206ENST00000577645 SMARCA5O60264 1052 aaPredicted RBP11.73□□□□□ -0.53
NUP85-206ENST00000577645 USP5P45974 858 aa11.73□□□□□ -0.53
NUP85-206ENST00000577645 PKN2Q16513 984 aaKnown RBP11.73□□□□□ -0.53
NUP85-206ENST00000577645 ANKRD45Q5TZF3 282 aa11.73□□□□□ -0.53
NUP85-206ENST00000577645 TTC6Q86TZ1 520 aa11.73□□□□□ -0.53
NUP85-206ENST00000577645 CHD1LQ86WJ1 897 aa11.73□□□□□ -0.53
NUP85-206ENST00000577645 FOXP4Q8IVH2 680 aaPredicted RBP11.73□□□□□ -0.53
NUP85-206ENST00000577645 PLCD3Q8N3E9 789 aa11.73□□□□□ -0.53
NUP85-206ENST00000577645 KBTBD3Q8NAB2 608 aa11.73□□□□□ -0.53
NUP85-206ENST00000577645 SH3RF3Q8TEJ3 882 aaPredicted RBP11.73□□□□□ -0.53
NUP85-206ENST00000577645 OTUD5Q96G74 571 aa11.73□□□□□ -0.53
NUP85-206ENST00000577645 BOLA2Q9H3K6 86 aa11.73□□□□□ -0.53
NUP85-206ENST00000577645 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.73□□□□□ -0.53
NUP85-206ENST00000577645 AS3MTQ9HBK9 375 aa11.73□□□□□ -0.53
NUP85-206ENST00000577645 SLC45A1Q9Y2W3 748 aa11.73□□□□□ -0.53
NUP85-206ENST00000577645 ZNF532Q9HCE3 1301 aa11.72□□□□□ -0.53
NUP85-206ENST00000577645 CCL15-CCL14A0A0B4J2E2 113 aa11.72□□□□□ -0.53
NUP85-206ENST00000577645 DDTLA6NHG4 134 aaPredicted RBP11.72□□□□□ -0.53
NUP85-206ENST00000577645 TRPA1O75762 1119 aa11.72□□□□□ -0.53
NUP85-206ENST00000577645 ASNSP08243 561 aa11.72□□□□□ -0.53
NUP85-206ENST00000577645 MX1P20591 662 aa11.72□□□□□ -0.53
NUP85-206ENST00000577645 ARHGEF6Q15052 776 aa11.72□□□□□ -0.53
NUP85-206ENST00000577645 CCL15Q16663 113 aa11.72□□□□□ -0.53
NUP85-206ENST00000577645 FASTKD5Q7L8L6 764 aaKnown RBP11.72□□□□□ -0.53
NUP85-206ENST00000577645 CRACR2BQ8N4Y2 399 aaPredicted RBP11.72□□□□□ -0.53
NUP85-206ENST00000577645 TGFBRAP1Q8WUH2 860 aa11.72□□□□□ -0.53
NUP85-206ENST00000577645 MS4A4AQ96JQ5 239 aa11.72□□□□□ -0.53
NUP85-206ENST00000577645 ZIC5Q96T25 663 aa11.72□□□□□ -0.53
NUP85-206ENST00000577645 RIOK1Q9BRS2 568 aaKnown RBP11.72□□□□□ -0.53
NUP85-206ENST00000577645 ANTXR1Q9H6X2 564 aa11.72□□□□□ -0.53
NUP85-206ENST00000577645 ATP8A2Q9NTI2 1148 aa11.72□□□□□ -0.53
NUP85-206ENST00000577645 RBBP6Q7Z6E9 1792 aaKnown RBP11.72□□□□□ -0.53
NUP85-206ENST00000577645 SALL3Q9BXA9 1300 aa11.71□□□□□ -0.53
NUP85-206ENST00000577645 TCRBV5S4A2TA0A5A2 114 aa11.71□□□□□ -0.53
NUP85-206ENST00000577645 PHF20L1A8MW92 1017 aa11.71□□□□□ -0.53
NUP85-206ENST00000577645 GNAT2P19087 354 aa11.71□□□□□ -0.53
NUP85-206ENST00000577645 INPP5BP32019 993 aa11.71□□□□□ -0.53
NUP85-206ENST00000577645 GJA5P36382 358 aa11.71□□□□□ -0.53
NUP85-206ENST00000577645 GIMAP6Q6P9H5 292 aa11.71□□□□□ -0.53
NUP85-206ENST00000577645 MIGA2Q7L4E1 593 aa11.71□□□□□ -0.53
NUP85-206ENST00000577645 SH3BP5LQ7L8J4 393 aa11.71□□□□□ -0.53
NUP85-206ENST00000577645 ANKRD23Q86SG2 305 aa11.71□□□□□ -0.53
NUP85-206ENST00000577645 ADGRA1Q86SQ6 560 aa11.71□□□□□ -0.53
NUP85-206ENST00000577645 ZKSCAN4Q969J2 545 aaPredicted RBP11.71□□□□□ -0.53
NUP85-206ENST00000577645 SWAP70Q9UH65 585 aa11.71□□□□□ -0.53
NUP85-206ENST00000577645 SERPINB13Q9UIV8 391 aa11.71□□□□□ -0.53
NUP85-206ENST00000577645 FZD1Q9UP38 647 aa11.71□□□□□ -0.53
NUP85-206ENST00000577645 GREB1LQ9C091 1923 aaPredicted RBP11.7□□□□□ -0.54
NUP85-206ENST00000577645 IRF6O14896 467 aa11.7□□□□□ -0.54
NUP85-206ENST00000577645 PTPRAP18433 802 aa11.7□□□□□ -0.54
NUP85-206ENST00000577645 CAP2P40123 477 aa11.7□□□□□ -0.54
NUP85-206ENST00000577645 PABPC4Q13310 644 aaKnown RBP eCLIP11.7□□□□□ -0.54
NUP85-206ENST00000577645 MAPKAPK5Q8IW41 473 aa11.7□□□□□ -0.54
NUP85-206ENST00000577645 MIGA1Q8NAN2 632 aa11.7□□□□□ -0.54
NUP85-206ENST00000577645 PROCA1Q8NCQ7 364 aaPredicted RBP11.7□□□□□ -0.54
NUP85-206ENST00000577645 APPBP2Q92624 585 aa11.7□□□□□ -0.54
NUP85-206ENST00000577645 LNPKQ9C0E8 428 aa11.7□□□□□ -0.54
NUP85-206ENST00000577645 ZFYVE28Q9HCC9 887 aa11.7□□□□□ -0.54
NUP85-206ENST00000577645 ARPP21Q9UBL0 812 aaPredicted RBP11.7□□□□□ -0.54
NUP85-206ENST00000577645 STAP2Q9UGK3 403 aa11.7□□□□□ -0.54
NUP85-206ENST00000577645 PNMA3Q9UL41 463 aa11.7□□□□□ -0.54
NUP85-206ENST00000577645 LAMA4Q16363 1823 aa11.7□□□□□ -0.54
NUP85-206ENST00000577645 A0A0G2JLL6 359 aaPredicted RBP11.69□□□□□ -0.54
NUP85-206ENST00000577645 GPR25O00155 361 aa11.69□□□□□ -0.54
NUP85-206ENST00000577645 IGF2BP3O00425 579 aaKnown RBP eCLIP11.69□□□□□ -0.54
NUP85-206ENST00000577645 FKTNO75072 461 aa11.69□□□□□ -0.54
NUP85-206ENST00000577645 GNRH1P01148 92 aa11.69□□□□□ -0.54
NUP85-206ENST00000577645 MKRN3Q13064 507 aaKnown RBP11.69□□□□□ -0.54
NUP85-206ENST00000577645 TAF1CQ15572 869 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms