RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 ERVFC1P60507 584 aa5.76□□□□□ -1.49
TOP2A-202ENST00000577541 EHHADHQ08426 723 aa5.76□□□□□ -1.49
TOP2A-202ENST00000577541 TTC6Q86TZ1 520 aa5.76□□□□□ -1.49
TOP2A-202ENST00000577541 MYLIPQ8WY64 445 aa5.76□□□□□ -1.49
TOP2A-202ENST00000577541 HSPA12BQ96MM6 686 aa5.76□□□□□ -1.49
TOP2A-202ENST00000577541 OTOL1A6NHN0 477 aaPredicted RBP5.75□□□□□ -1.49
TOP2A-202ENST00000577541 MPSTP25325 297 aa5.75□□□□□ -1.49
TOP2A-202ENST00000577541 TMEM151BQ8IW70 566 aa5.75□□□□□ -1.49
TOP2A-202ENST00000577541 FOXQ1Q9C009 403 aa5.75□□□□□ -1.49
TOP2A-202ENST00000577541 MCOLN1Q9GZU1 580 aa5.75□□□□□ -1.49
TOP2A-202ENST00000577541 KRT82Q9NSB4 513 aa5.75□□□□□ -1.49
TOP2A-202ENST00000577541 SPATS1Q496A3 300 aa5.74□□□□□ -1.49
TOP2A-202ENST00000577541 TMEM164Q5U3C3 297 aa5.74□□□□□ -1.49
TOP2A-202ENST00000577541 UBE3DQ7Z6J8 389 aa5.74□□□□□ -1.49
TOP2A-202ENST00000577541 RNF214Q8ND24 703 aa5.74□□□□□ -1.49
TOP2A-202ENST00000577541 HELQQ8TDG4 1101 aa5.74□□□□□ -1.49
TOP2A-202ENST00000577541 KCTD3Q9Y597 815 aa5.74□□□□□ -1.49
TOP2A-202ENST00000577541 SEMA7AO75326 666 aa5.73□□□□□ -1.49
TOP2A-202ENST00000577541 EOMESO95936 686 aa5.73□□□□□ -1.49
TOP2A-202ENST00000577541 INSRRP14616 1297 aa5.73□□□□□ -1.49
TOP2A-202ENST00000577541 ITPKAP23677 461 aa5.73□□□□□ -1.49
TOP2A-202ENST00000577541 ZNF157P51786 506 aaPredicted RBP5.73□□□□□ -1.49
TOP2A-202ENST00000577541 PUM1Q14671 1186 aaKnown RBP eCLIP5.73□□□□□ -1.49
TOP2A-202ENST00000577541 GALNT12Q8IXK2 581 aa5.73□□□□□ -1.49
TOP2A-202ENST00000577541 PRDM5Q9NQX1 630 aaPredicted RBP5.73□□□□□ -1.49
TOP2A-202ENST00000577541 SLAMF8Q9P0V8 285 aa5.73□□□□□ -1.49
TOP2A-202ENST00000577541 PRR33A8MZF0 331 aa5.72□□□□□ -1.49
TOP2A-202ENST00000577541 FAM155AB1AL88 458 aaPredicted RBP5.72□□□□□ -1.49
TOP2A-202ENST00000577541 RFXAPO00287 272 aa5.72□□□□□ -1.49
TOP2A-202ENST00000577541 GSTP1P09211 210 aaKnown RBP5.72□□□□□ -1.49
TOP2A-202ENST00000577541 USP5P45974 858 aa5.72□□□□□ -1.49
TOP2A-202ENST00000577541 FAAP100Q0VG06 881 aa5.72□□□□□ -1.49
TOP2A-202ENST00000577541 ALKBH2Q6NS38 261 aa5.72□□□□□ -1.49
TOP2A-202ENST00000577541 CRELD1Q96HD1 420 aa5.72□□□□□ -1.49
TOP2A-202ENST00000577541 MAPK8IP1Q9UQF2 711 aa5.72□□□□□ -1.49
TOP2A-202ENST00000577541 MYOCOSA0A1B0GUC4 107 aa5.71□□□□□ -1.5
TOP2A-202ENST00000577541 PEX10O60683 326 aa5.71□□□□□ -1.5
TOP2A-202ENST00000577541 ERVK-24P63145 666 aa5.71□□□□□ -1.5
TOP2A-202ENST00000577541 SRPK2P78362 688 aaKnown RBP5.71□□□□□ -1.5
TOP2A-202ENST00000577541 EFEMP1Q12805 493 aa5.71□□□□□ -1.5
TOP2A-202ENST00000577541 CDKAL1Q5VV42 579 aa5.71□□□□□ -1.5
TOP2A-202ENST00000577541 CLP1Q92989 425 aaKnown RBP5.71□□□□□ -1.5
TOP2A-202ENST00000577541 H3BS24 57 aa5.7□□□□□ -1.5
TOP2A-202ENST00000577541 OVOL3O00110 214 aa5.7□□□□□ -1.5
TOP2A-202ENST00000577541 AKAP8O43823 692 aaKnown RBP5.7□□□□□ -1.5
TOP2A-202ENST00000577541 NTF4P34130 210 aa5.7□□□□□ -1.5
TOP2A-202ENST00000577541 PTPN12Q05209 780 aaKnown RBP5.7□□□□□ -1.5
TOP2A-202ENST00000577541 MTMR3Q13615 1198 aa5.7□□□□□ -1.5
TOP2A-202ENST00000577541 ZC3H12AQ5D1E8 599 aaKnown RBP5.7□□□□□ -1.5
TOP2A-202ENST00000577541 RALGPS1Q5JS13 557 aa5.7□□□□□ -1.5
TOP2A-202ENST00000577541 USPL1Q5W0Q7 1092 aa5.7□□□□□ -1.5
TOP2A-202ENST00000577541 TMEM132EQ6IEE7 984 aa5.7□□□□□ -1.5
TOP2A-202ENST00000577541 MYRFQ9Y2G1 1151 aa5.7□□□□□ -1.5
TOP2A-202ENST00000577541 DNAJC25-GNG10A0A024R161 153 aa5.69□□□□□ -1.5
TOP2A-202ENST00000577541 HPXP02790 462 aa5.69□□□□□ -1.5
TOP2A-202ENST00000577541 AAMPQ13685 434 aa5.69□□□□□ -1.5
TOP2A-202ENST00000577541 KIAA0319Q5VV43 1072 aa5.69□□□□□ -1.5
TOP2A-202ENST00000577541 ZNF605Q86T29 641 aa5.69□□□□□ -1.5
TOP2A-202ENST00000577541 PDZD3Q86UT5 571 aa5.69□□□□□ -1.5
TOP2A-202ENST00000577541 IRF2BP1Q8IU81 584 aa5.69□□□□□ -1.5
TOP2A-202ENST00000577541 RNF32Q9H0A6 362 aa5.69□□□□□ -1.5
TOP2A-202ENST00000577541 DNAJC25Q9H1X3 360 aa5.69□□□□□ -1.5
TOP2A-202ENST00000577541 TEX51A0A1B0GUA7 166 aa5.68□□□□□ -1.5
TOP2A-202ENST00000577541 FZD6O60353 706 aa5.68□□□□□ -1.5
TOP2A-202ENST00000577541 TRHRP34981 398 aaPredicted RBP5.68□□□□□ -1.5
TOP2A-202ENST00000577541 HK2P52789 917 aa5.68□□□□□ -1.5
TOP2A-202ENST00000577541 RPS26P11Q5JNZ5 115 aaPredicted RBP5.68□□□□□ -1.5
TOP2A-202ENST00000577541 FEZF2Q8TBJ5 459 aa5.68□□□□□ -1.5
TOP2A-202ENST00000577541 EHD4Q9H223 541 aa5.68□□□□□ -1.5
TOP2A-202ENST00000577541 SP110Q9HB58 689 aa5.68□□□□□ -1.5
TOP2A-202ENST00000577541 GCM1Q9NP62 436 aa5.68□□□□□ -1.5
TOP2A-202ENST00000577541 TMEM59LQ9UK28 342 aa5.68□□□□□ -1.5
TOP2A-202ENST00000577541 THAP5Q7Z6K1 395 aa5.67□□□□□ -1.5
TOP2A-202ENST00000577541 ZDHHC14Q8IZN3 488 aa5.67□□□□□ -1.5
TOP2A-202ENST00000577541 MFSD4AQ8N468 514 aa5.67□□□□□ -1.5
TOP2A-202ENST00000577541 STK35Q8TDR2 534 aa5.67□□□□□ -1.5
TOP2A-202ENST00000577541 KCNB2Q92953 911 aa5.67□□□□□ -1.5
TOP2A-202ENST00000577541 SGPP1Q9BX95 441 aa5.67□□□□□ -1.5
TOP2A-202ENST00000577541 SLC6A17Q9H1V8 727 aa5.67□□□□□ -1.5
TOP2A-202ENST00000577541 ZNF777Q9ULD5 760 aaPredicted RBP5.67□□□□□ -1.5
TOP2A-202ENST00000577541 ST14Q9Y5Y6 855 aa5.67□□□□□ -1.5
TOP2A-202ENST00000577541 ATP2B4P23634 1241 aa5.66□□□□□ -1.5
TOP2A-202ENST00000577541 PLP2Q04941 152 aa5.66□□□□□ -1.5
TOP2A-202ENST00000577541 SSPNQ14714 243 aa5.66□□□□□ -1.5
TOP2A-202ENST00000577541 C22orf34Q6ZV56 151 aa5.66□□□□□ -1.5
TOP2A-202ENST00000577541 PANK1Q8TE04 598 aa5.66□□□□□ -1.5
TOP2A-202ENST00000577541 UBE2FQ969M7 185 aa5.66□□□□□ -1.5
TOP2A-202ENST00000577541 TEPSINQ96N21 525 aa5.66□□□□□ -1.5
TOP2A-202ENST00000577541 GPR20Q99678 358 aa5.66□□□□□ -1.5
TOP2A-202ENST00000577541 ABCB6Q9NP58 842 aa5.66□□□□□ -1.5
TOP2A-202ENST00000577541 GJD3Q8N144 294 aa5.65□□□□□ -1.5
TOP2A-202ENST00000577541 CCDC87Q9NVE4 849 aa5.65□□□□□ -1.5
TOP2A-202ENST00000577541 PPM1JQ5JR12 505 aa5.64□□□□□ -1.51
TOP2A-202ENST00000577541 SFRP5Q5T4F7 317 aa5.64□□□□□ -1.51
TOP2A-202ENST00000577541 MPRIPQ6WCQ1 1025 aa5.64□□□□□ -1.51
TOP2A-202ENST00000577541 GTF3C2Q8WUA4 911 aaPredicted RBP5.64□□□□□ -1.51
TOP2A-202ENST00000577541 ADAMTS10Q9H324 1103 aa5.64□□□□□ -1.51
TOP2A-202ENST00000577541 ZNF552Q9H707 407 aaPredicted RBP5.64□□□□□ -1.51
TOP2A-202ENST00000577541 ZSWIM5Q9P217 1185 aa5.64□□□□□ -1.51
TOP2A-202ENST00000577541 CSADQ9Y600 493 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms